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Author Karp [152 articles]

Recent papers posted to CiteULike by the author Karp.
  • The Medical Evaluation of Living Kidney Donors: A Survey of US Transplant Centers
    American Journal of Transplantation, Vol. 7, No. 10. (October 2007), pp. 2333-2343.
    by Mandelbrot, , Pavlakis, , Danovitch, , Johnson, , Karp, , Khwaja, , Hanto, , Rodrigue,
    posted to transplant-living-donation by brainsman2000 on 2008-08-12 08:02:54 as read
  • Annotation-based inference of transporter function.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    by TJ Lee, I Paulsen, P Karp
    posted to urate-transporter function by jyuh on 2008-08-08 15:57:48 as **
  • DNA microarray normalization methods can remove bias from differential protein expression analysis of 2D difference gel electrophoresis results.
    Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2026-2034.
    by DP Kreil, NA Karp, KS Lilley
    posted to normalization by baldigroup on 2008-08-08 00:46:43 as ** along with 2 people and 1 group Fsilvestre urbo ecotoxurbo
  • notes eQED: an efficient method for interpreting eQTL associations using protein networks
    Mol Syst Biol, Vol. 4 (4 March 2008)
    by Silpa Suthram, Andreas Beyer, Richard M Karp, Yonina Eldar, Trey Ideker
    posted to networks eqtl by APRegier on 2008-07-25 19:55:39 as ** along with 7 people ptrobajo jyuh thomaskelder caseybrown zwang biomcgary jo_davies
  • Neonatal-onset multisystem inflammatory disease responsive to interleukin-1beta inhibition.
    The New England journal of medicine, Vol. 355, No. 6. (10 August 2006), pp. 581-592.
    by R Goldbach-Mansky, NJ Dailey, SW Canna, A Gelabert, J Jones, BI Rubin, HJ Kim, C Brewer, C Zalewski, E Wiggs, S Hill, ML Turner, BI Karp, I Aksentijevich, F Pucino, SR Penzak, MH Haverkamp, L Stein, BS Adams, TL Moore, RC Fuhlbrigge, B Shaham, JN Jarvis, K O'Neil, RK Vehe, LO Beitz, G Gardner, WP Hannan, RW Warren, W Horn, JL Cole, SM Paul, PN Hawkins, TH Pham, C Snyder, RA Wesley, SC Hoffmann, SM Holland, JA Butman, DL Kastner
    posted to anakinra by djmonstermo on 2008-07-20 03:37:23 as **
  • The Pathway Tools cellular overview diagram and Omics Viewer
    Nucl. Acids Res., Vol. 34, No. 13. (7 August 2006), pp. 3771-3778.
    by Suzanne M Paley, Peter D Karp
    posted to protein-levels metabolite-concentrations gene-regulation gene-expression flux-measurements biocyc by JeremyZucker on 2008-07-19 01:27:22 as ** along with 2 people jyuh cjeans
  • Using functional and organizational information to improve genome-wide computational prediction of transcription units on pathway-genome databases.
    Bioinformatics, Vol. 20, No. 5. (22 March 2004), pp. 709-717.
    by PR Romero, PD Karp
    posted to regulatory-networks operon biocyc by JeremyZucker on 2008-07-17 18:56:10 as ** along with 1 person and 2 groups ana structural_bioinformatics Bioinformatics
  • A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases.
    BMC Bioinformatics, Vol. 5, No. 1. (9 June 2004)
    by ML Green, PD Karp
    posted to biocyc by JeremyZucker on 2008-07-17 18:53:56 as ** along with 4 people tmmurali eweaver wnpx shung
  • The Pathway Tools software.
    Bioinformatics, Vol. 18 Suppl 1 (2002)
    by PD Karp, S Paley, P Romero
    posted to biocyc by JeremyZucker on 2008-07-17 18:53:11 as ** along with 2 people shung eweaver
  • A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information
    Mol Syst Biol, Vol. 3 (26 June 2007)
    by Adam M Feist, Christopher S Henry, Jennifer L Reed, Markus Krummenacker, Andrew R Joyce, Peter D Karp, Linda J Broadbelt, Vassily Hatzimanikatis, Bernhard O Palsson
    posted to fba ecoli ecocyc biocyc by JeremyZucker on 2008-07-17 18:51:37 as ** along with 4 people michaelbarton hryk alexg cjeans
  • HAPLOPOOL: improving haplotype frequency estimation through DNA pools and phylogenetic modeling
    Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3048-3055.
    by Bonnie Kirkpatrick, Carlos S Armendariz, Richard M Karp, Eran Halperin
    posted to software pooling haplotype by jyuh on 2008-07-16 14:34:59 as ** along with 1 person ryanraaum
  • Access control for the services oriented architecture
    (2007), pp. 9-17.
    by Jun Li, Alan H Karp
    posted to security fedaration administration by Khaled on 2008-07-15 11:44:44 as **
  • A simple derivation of edmonds' algorithm for optimum branchings
    Networks, Vol. 1, No. 3. (1971), pp. 265-272.
    by RM Karp
    posted to mst dmst by karipuf on 2008-07-13 15:52:51 as **
  • Bioenergy from plants and the sustainable yield challenge
    New Phytologist, Vol. 179, No. 1. (July 2008), pp. 15-32.
    by Karp, Angela, Shield, Ian
    posted to biofuel by jwm on 2008-07-08 11:15:50 as ** along with 1 person natstreet
  • Load balancing in dynamic structured P2P systems
    INFOCOM 2004. Twenty-third AnnualJoint Conference of the IEEE Computer and Communications Societies, Vol. 4 (2004), pp. 2253-2262 vol.4.
    by B Godfrey, K Lakshminarayanan, S Surana, R Karp, I Stoica
    posted to structured-overlay-network peer-to-peer p2p overlay-network by yoavtock on 2008-07-08 09:02:34 as ** along with 4 people and 1 group mdeindl gexarchakos jlwagoner mediallo P2P
  • Efficient PRAM simulation on a distributed memory machine
    (1992), pp. 318-326.
    by Richard M Karp, Michael Luby, Friedhelm
    posted to storage by dmeister on 2008-07-05 09:41:44 as **
  • Advances in understanding the mechanisms and management of persistent pain in older adults
    Br. J. Anaesth., Vol. 101, No. 1. (1 July 2008), pp. 111-120.
    by JF Karp, JW Shega, NE Morone, DK Weiner
    posted to pain library-anaesthesia anaesthetics by chebbes on 2008-06-26 20:51:56 as **
  • Discovering local structure in gene expression data: the order-preserving submatrix problem.
    Journal of computational biology : a journal of computational molecular cell biology, Vol. 10, No. 3-4. (2003), pp. 373-384.
    by A Ben-Dor, B Chor, R Karp, Z Yakhini
    posted to no-tag by umit on 2008-06-23 17:15:29 as **
  • Drug delivery systems in urology--getting "smarter".
    Urology, Vol. 68, No. 3. (September 2006), pp. 463-469.
    by OC Farokhzad, JD Dimitrakov, JM Karp, A Khademhosseini, MR Freeman, R Langer
    posted to no-tag by mschofie on 2008-06-18 00:03:33 as **
  • Development and therapeutic applications of advanced biomaterials
    Current Opinion in Biotechnology, Vol. 18, No. 5. (October 2007), pp. 454-459.
    by Jeffrey M Karp, Robert Langer
    posted to no-tag by mschofie on 2008-06-17 23:56:12 as **
  • Crystallographic study of hydration of an internal cavity in engineered proteins with buried polar or ionizable groups
    Biophys. J. (4 January 2008), biophysj.107.122473.
    by Jamie L Schlessman, Colby Abe, Apostolos Gittis, Daniel A Karp, Michael A Dolan, Bertrand Garcia-Moreno
    posted to water_in_biopolymers dielectric_in_biopolymers by onufriev on 2008-06-15 18:49:53 as *** along with 2 people and 1 group sobolevnrm paulschlesinger baker-group
  • The EcoCyc Database
    Nucl. Acids Res., Vol. 30, No. 1. (1 January 2002), pp. 56-58.
    by Peter D Karp, Monica Riley, Milton Saier, Ian T Paulsen, Julio Collado-Vides, Suzanne M Paley, Alida Pellegrini-Toole, Cesar Bonavides, Socorro Gama-Castro
    posted to regulatorynetworks by dquest on 2008-06-10 20:56:50 as ** along with 1 person balajis
  • The comprehensive updated regulatory network of Escherichia coli K-12.
    BMC Bioinformatics, Vol. 7, No. 1. (6 January 2006)
    by Heladia Salgado, Alberto Santos-Zavaleta, Socorro Gama-Castro, Martin Peralta-Gil, Monica I Penaloza-Spinola, Agustino Martinez-Antonio, Peter D Karp, Julio Collado-Vides
    posted to regulatorynetworks by dquest on 2008-06-10 19:47:39 as ** along with 2 people balajis discreteonyxorb
  • PTC124 targets genetic disorders caused by nonsense mutations
    Nature (22 April 2007)
    by Ellen M Welch, Elisabeth R Barton, Jin Zhuo, Yuki Tomizawa, Westley J Friesen, Panayiota Trifillis, Sergey Paushkin, Meenal Patel, Christopher R Trotta, Seongwoo Hwang, Richard G Wilde, Gary Karp, James Takasugi, Guangming Chen, Stephen Jones, Hongyu Ren, Young-Choon Moon, Donald Corson, Anthony A Turpoff, Jeffrey A Campbell, Morgan M Conn, Atiyya Khan, Neil G Almstead, Jean Hedrick, Anna Mollin, Nicole Risher, Marla Weetall, Shirley Yeh, Arthur A Branstrom, Joseph M Colacino, John Babiak, William D Ju, Samit Hirawat, Valerie J Northcutt, Langdon L Miller, Phyllis Spatrick, Feng He, Masataka Kawana, Huisheng Feng, Allan Jacobson, Stuart W Peltz, Lee H Sweeney
    posted to readthrough ptc by shuzhens on 2008-06-07 07:01:28 as ** along with 1 person and 2 groups dchughes G4ID Genetics-of-Gambling
  • A biodegradable and biocompatible gecko-inspired tissue adhesive
    Proceedings of the National Academy of Sciences (19 February 2008), 0712117105.
    by Alborz Mahdavi, Lino Ferreira, Cathryn Sundback, Jason W Nichol, Edwin P Chan, David J Carter, Chris J Bettinger, Siamrut Patanavanich, Loice Chignozha, Eli Ben-Joseph, Alex Galakatos, Howard Pryor, Irina Pomerantseva, Peter T Masiakos, William Faquin, Andreas Zumbuehl, Seungpyo Hong, Jeffrey Borenstein, Joseph Vacanti, Robert Langer, Jeffrey M Karp
    posted to no-tag by ccdjmrs to the group Nanotechnology and Functional, Smart Materials on 2008-06-06 17:19:12 as ** along with 1 person and 1 group winkler nanomaterials
  • A scalable content-addressable network
    SIGCOMM Comput. Commun. Rev., Vol. 31, No. 4. (October 2001), pp. 161-172.
    by Sylvia Ratnasamy, Paul Francis, Mark Handley, Richard Karp, Scott Schenker
    posted to to peer by srineet on 2008-06-05 06:59:59 as ****
  • CLIFF: Clustering of High-Dimensional Microarray Data via Iterative Feature Filtering Using Normalized Cuts
    (2001)
    by Eric P Xing, Richard M Karp
    posted to variable unsupervised selection reduction dimensionality clustering by vlachmore on 2008-06-04 16:22:45 as **
  • Potential Role of Tamoxifen in Prevention of Breast Cancer
    J. Natl. Cancer Inst., Vol. 83, No. 20. (16 October 1991), pp. 1450-1459.
    by Susan G Nayfield, Judith E Karp, Leslie G Ford, Andrew F Dorr, Barnett S Kramer
    posted to tamoxifeno pibic by igorccampos on 2008-06-01 22:04:59 as **
  • Conserved pathways within bacteria and yeast as revealed by global protein network alignment.
    Proc Natl Acad Sci U S A, Vol. 100, No. 20. (30 September 2003), pp. 11394-11399.
    by BP Kelley, R Sharan, RM Karp, T Sittler, DE Root, BR Stockwell, T Ideker
    posted to networks alignment algorithms by carlk on 2008-05-23 18:27:44 as read along with 8 people and 1 group okarsligil balajis nuke2005 gurkanbebek mirzazadeh denilw shu mdstobbe Bioinformatics
  • Efficient algorithms for detecting signaling pathways in protein interaction networks.
    J Comput Biol, Vol. 13, No. 2. (March 2006), pp. 133-144.
    by J Scott, T Ideker, RM Karp, R Sharan
    posted to signaling protein networks by carlk on 2008-05-23 18:06:19 as read along with 4 people wnpx gurkanbebek koller iris_2001
  • Statins and Cancer Risk
    The American Journal of Medicine, Vol. 121, No. 4. (April 2008), pp. 302-309.
    by Igor Karp, Hassan Behlouli, Jacques Lelorier, Louise Pilote
    posted to no-tag by jyuh on 2008-05-17 14:14:29 as **
  • Design and analysis issues in quantitative proteomics studies.
    Proteomics, Vol. 7 Suppl 1 (September 2007), pp. 42-50.
    by NA Karp, KS Lilley
    posted to no-tag by jyuh on 2008-05-15 10:16:49 as **
  • Windows Vista Annoyances: Tips, Secrets, and Hacks
    (04 January 2008)
    by David A Karp
    posted to windows it books 2008 by quianominorleo on 2008-05-14 23:37:31 as ** along with 1 person graykittencat
  • Nutrient-related analysis of pathway/genome databases.
    Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2001), pp. 471-482.
    by PR Romero, P Karp
    posted to symbolic-programming ecocyc biohacker by JeremyZucker on 2008-05-14 16:46:41 as **
  • notes The Happiest Baby on the Block: The New Way to Calm Crying and Help Your Newborn Baby Sleep Longer
    (27 December 2005)
    by Harvey Karp
    posted to no-tag by testbank to the group testbank on 2008-05-14 01:49:26 as **
  • Stuck Behind a Wall of Fear: How Cognitive-Behavior Therapy Helped One Woman With Social Phobia
    Clinical Case Studies, Vol. 2, No. 3. (1 July 2003), pp. 171-187.
    by Jennifer Karp, Michel J Dugas
    posted to therapy social phobia cbt case-reports by jfpsy to the group Clinical_Psychology on 2008-05-13 15:26:12 as ***
  • Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA
    Nature, Vol. 451, No. 7175., pp. 202-206.
    by Wenqiang Yu, David Gius, Patrick Onyango, Kristi Muldoon-Jacobs, Judith Karp, Andrew P Feinberg, Hengmi Cui
    posted to no-tag by KristiMuldoonJacobs on 2008-05-13 14:28:02 as ***** along with 3 people dchughes mtagaya Alexander_Kanitz
  • Expansion of the BioCyc collection of pathway/genome databases to 160 genomes
    Nucleic Acids Research, Vol. 33, No. 19. (2005), pp. 6083-6089.
    by Peter D Karp, Christos A Ouzounis, Caroline Moore-Kochlacs, Leon Goldovsky, Pallavi Kaipa, Dag Ahren, Sophia Tsoka, Nikos Darzentas, Victor Kunin, Nuria Lopez-Bigas
    posted to no-tag by yggdrasil on 2008-04-21 11:12:43 as ** along with 3 people tny fisherp leechuck
  • Comment on: Does the use of antibiotics in food animals pose a risk to human health? A critical review of published data
    J. Antimicrob. Chemother., Vol. 54, No. 1. (1 July 2004), pp. 273-274.
    by Beth E Karp, Jorgen Engberg
    posted to no-tag by avaughn2 on 2008-04-15 18:59:00 as **
  • Opportunistic Use of Content Addressable Storage for Distributed File Systems
    (June 2003), pp. 127-140.
    by Niraj Tolia, Michael Kozuch, Mahadev Satyanarayanan, Brad Karp, Adrian Perrig, Thomas Bressoud
    posted to datadeduplication by dmeister on 2008-04-15 11:48:25 as **
  • Getting Out the Vote: Party Mobilization in a Comparative Perspective
    British Journal of Political Science, Vol. 38, No. 01. (2007), pp. 91-112.
    by Jeffrey A Karp, Susan A Banducci, Shaun Bowler
    posted to election mobilization party voting by tkosaka on 2008-04-15 02:33:38 as read
  • A scalable content-addressable network
    Vol. 31, No. 4. (October 2001), pp. 161-172.
    by Sylvia Ratnasamy, Paul Francis, Mark Handley, Richard Karp, Scott Schenker
    posted to p2p by sqazi on 2008-04-13 06:43:29 as read along with 24 people and 10 groups dmeister aliku sit vandywutj diegolino_veneziano graham scottmoody yannawu sterovetta thiagomanel Jacquelinebfan onafoggynight babyone zicat gexarchakos mudbridge mrkoot adri jpah ransombriggs brogle handsome jodal hyhu84 InformationRetrieval semantic-multicast-routing vanderbilt-multimedia DTN-Multicast SRG_at_UCD P2P CGL-Publications SNE DHT mesh_network
  • From the Cover: Conserved patterns of protein interaction in multiple species.
    Proc Natl Acad Sci U S A, Vol. 102, No. 6. (8 February 2005), pp. 1974-1979.
    by R Sharan, S Suthram, RM Kelley, T Kuhn, S McCuine, P Uetz, T Sittler, RM Karp, T Ideker
    posted to networkblast by mdstobbe on 2008-04-10 12:08:29 as ** along with 11 people and 1 group sza dragonrez okarsligil balajis nuke2005 maryee gurkanbebek koller cjeans iris_2001 maralena Bioinformatics
  • A Scalable Content Addressable Network
    No. TR-00-010. (2000)
    by Sylvia Ratnasamy, Paul Francis, Mark Handley, Richard Karp, Scott Shenker
    posted to no-tag by Azarias on 2008-04-09 22:48:59 as ** along with 4 people and 1 group pdlug scottmoody mcalster henningpeters semantic-multicast-routing
  • Noisy binary search and its applications
    (2007), pp. 881-890.
    by Richard M Karp, Robert Kleinberg
    posted to algorithms approximation randomized theory by brettdh on 2008-04-09 19:28:18 as **
  • Querying and computing with BioCyc databases
    Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3454-3455.
    by Markus Krummenacker, Suzanne Paley, Lukas Mueller, Thomas Yan, Peter D Karp
    posted to database metacyc by anna_vt on 2008-04-03 11:54:04 as **
  • Nanomechanical Control of Cell Rolling in Two Dimensions through Surface Patterning of Receptors
    Nano Lett. (6 March 2008)
    by Rohit Karnik, Seungpyo Hong, Huanan Zhang, Ying Mei, Daniel G Anderson, Jeffrey M Karp, Robert Langer
    posted to biotas experiment hardcopy by kristgy on 2008-03-30 00:20:48 as **
  • Optimal Search and One-Way Trading Online Algorithms
    Algorithmica, Vol. 30 (2001), pp. 101-139.
    by El R Yaniv, A Fiat, RM Karp, G Turpin
    posted to computational-trading online optimal-search searching universal-portfolio universal-search by Scis0000002 on 2008-03-18 10:45:26 as ** along with 1 person scis0000001
  • Comparison of DIGE and post-stained gel electrophoresis with both traditional and SameSpots analysis for quantitative proteomics.
    Proteomics, Vol. 8, No. 5. (March 2008), pp. 948-960.
    by NA Karp, R Feret, DV Rubtsov, KS Lilley
    posted to no-tag by jyuh on 2008-03-13 16:17:00 as **
  • The complete genome sequence of Francisella tularensis, the causative agent of tularemia.
    Nat Genet, Vol. 37, No. 2. (February 2005), pp. 153-159.
    by P Larsson, PC Oyston, P Chain, MC Chu, M Duffield, HH Fuxelius, E Garcia, G Hälltorp, D Johansson, KE Isherwood, PD Karp, E Larsson, Y Liu, S Michell, J Prior, R Prior, S Malfatti, A Sjöstedt, K Svensson, N Thompson, L Vergez, JK Wagg, BW Wren, LE Lindler, SG Andersson, M Forsman, RW Titball
    posted to frank by Xavier on 2008-03-07 16:29:42 as ** along with 1 person greger_halltorp
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