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Author Simonis [10 articles]

Recent papers posted to CiteULike by the author Simonis.
  • Revisiting the Saccharomyces cerevisiae predicted ORFeome
    Genome Res. (23 May 2008), gr.076661.108.
    by Qian-Ru Li, Anne-Ruxandra Carvunis, Haiyuan Yu, Jing-Dong J Han, Quan Zhong, Nicolas Simonis, Stanley Tam, Tong Hao, Niels J Klitgord, Denis Dupuy, Danny Mou, Ilan Wapinski, Aviv Regev, David E Hill, Michael E Cusick, Marc Vidal
    posted to yeast plasmid by jyuh on 2008-08-16 01:45:51 as ** along with 4 people and 1 group biehl nklee stajich dbensasson Berkeley Mycology
  • A Protein Domain-Based Interactome Network for C. elegans Early Embryogenesis
    Cell, Vol. 134, No. 3. (8 August 2008), pp. 534-545.
    by Mike Boxem, Zoltan Maliga, Niels Klitgord, Na Li, Irma Lemmens, Miyeko Mana, Lorenzo de Lichtervelde, Joram D Mul, Diederik van de Peut, Maxime Devos, Nicolas Simonis, Muhammed A Yildirim, Murat Cokol, Huey-Ling Kao, Anne-Sophie de Smet, Haidong Wang, Anne-Lore Schlaitz, Tong Hao, Stuart Milstein, Changyu Fan, Mike Tipsword, Kevin Drew, Matilde Galli, Kahn Rhrissorrakrai, David Drechsel, Daphne Koller, Frederick P Roth, Lilia M Iakoucheva, Keith A Dunker, Richard Bonneau, Kristin C Gunsalus, David E Hill, Fabio Piano, Jan Tavernier, Sander van den Heuvel, Anthony A Hyman, Marc Vidal
    posted to structure proj_assembly networks evolution data_integration binding by chad_davis on 2008-08-13 16:33:46 as **** along with 2 people zwang phoenixzxl
  • Confirmation of Organized Modularity in the Yeast Interactome
    PLoS Biology, Vol. 5, No. 6. (1 June 2007), e153.
    by Nicolas Bertin, Nicolas Simonis, Denis Dupuy, Michael E Cusick, Jing-Dong J Han, Hunter B Fraser, Frederick P Roth, Marc Vidal
    posted to ppi by kintoki on 2008-07-01 03:16:30 as ** along with 1 person winterschlaefer
  • Assessing computational tools for the discovery of transcription factor binding sites
    Nature Biotechnology, Vol. 23, No. 1. (06 January 2005), pp. 137-144.
    by Martin Tompa, Nan Li, Timothy L Bailey, George M Church, Bart D De Moor, Eleazar Eskin, Alexander V Favorov, Martin C Frith, Yutao Fu, James J Kent, Vsevolod J Makeev, Andrei A Mironov, William S Noble, Giulio Pavesi, Graziano Pesole, Mireille Régnier, Nicolas Simonis, Saurabh Sinha, Gert Thijs, Jacques v van Helden, Mathias Vandenbogaert, Zhiping Weng, Christopher Workman, Chun Ye, Zhou Zhu
    posted to software motifs comparison by nuin on 2008-06-26 15:36:36 as ** along with 23 people and 6 groups ep161302 icases ana barry aalibes aprasad jfr tuck chad_davis lyongu tabu dquest neveaire ranb johncumbers noano xiaobeizhao olympos GustavoLacerda nklee mdimon dandaman vietanh0 structural_bioinformatics Biostatistics Computational-Genomics Bioinformatics Neuroscience TNT
  • Combining pattern discovery and discriminant analysis to predict gene co-regulation.
    Bioinformatics, Vol. 20, No. 15. (12 October 2004), pp. 2370-2379.
    by N Simonis, SJ Wodak, GN Cohen, J van Helden
    posted to enhancerprediction by maximilianh on 2008-02-07 14:18:35 as **
  • An evaluation of 3C-based methods to capture DNA interactions
    Nature Methods, Vol. 4, No. 11. (30 October 2007), pp. 895-901.
    by Marieke Simonis, Jurgen Kooren, Wouter de Laat
    posted to 3c dna-interactions method by idonaldson on 2007-11-06 09:35:52 as **
  • Infrared (3.8 mu m) interband cascade light-emitting diode array with record high efficiency
    Applied Physics Letters, Vol. 87, No. 4. (2005)
    by Naresh C Das, Kim Olver, F Towner, G Simonis, H Shen
    posted to led mid-infrared by ijbuss on 2007-10-22 17:16:19 as **
  • Oncogenic pathways impinging on the G2-restriction point
    Oncogene, Vol. aop, No. current.
    by F Foijer, M Simonis, M van Vliet, L Wessels, R Kerkhoven, PK Sorger, Te H Riele
    posted to no-tag by jyuh on 2007-09-28 11:19:46 as **
  • Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture–on-chip (4C)
    Nature Genetics, Vol. 38, No. 11. (08 October 2006), pp. 1348-1354.
    by Marieke Simonis, Petra Klous, Erik Splinter, Yuri Moshkin, Rob Willemsen, Elzo de Wit, Bas van Steensel, Wouter de Laat
    posted to 3c by mdimon on 2007-09-17 06:24:06 as ** along with 2 people aswin elzodw
  • Modularity of the transcriptional response of protein complexes in yeast.
    J Mol Biol, Vol. 363, No. 2. (20 October 2006), pp. 589-610.
    by N Simonis, D Gonze, C Orsi, J van Helden, SJ Wodak
    posted to networks tf yeast by aswin on 2006-11-10 15:11:30 as *****
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