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Group: IU_Informatics_CX - library [102 articles]

Недавние статьи, отправленные по почте членами IU_Informatics_CX группы
  • Extracting Biochemical Reaction Kinetics from Time Series Data
    Lecture Notes in Computer Science : Knowledge-Based Intelligent Information and Engineering Systems (2004), pp. 329-336.
    by Edmund J Crampin, Patrick E Mcsharry, Santiago Schnell
    posted to no-tag by schnell to the group IU_Informatics_CX on 2006-10-26 05:06:43 as ***
  • A formula for integrating inverse functions
    The Mathematical Gazette, Vol. 84 (2000), pp. 103-104.
    by S Schnell, C Mendoza
    posted to no-tag by schnell to the group IU_Informatics_CX on 2006-10-26 05:04:21 as ***
  • A Century of Enzyme Kinetics: Reliability of the K_M and v_max Estimates
    Comments on Theoretical Biology, Vol. 8, No. 2-3. (2003), pp. 169-187.
    by S Schnell, PK Maini
    posted to approximation curves enzyme fitting kinetics michaelis-menten procedures progress quasi-steady-state by schnell to the group IU_Informatics_CX on 2006-10-26 05:01:45 as ***
  • Computational Cell Biology
    Brief Bioinform, Vol. 4, No. 1. (2003), pp. 87-89.
    by Santiago Schnell, Jotun Hein
    posted to bibtex-import by schnell to the group IU_Informatics_CX on 2006-10-26 04:54:22 as ***
  • Computational Modeling of Genetic and Biochemical Networks. * Edited by James M. Bower and Hamid Bolouri * Computational Molecular Biology, A Bradford Book, The MIT Press, Cambridge, Massachusetts; 2004; * ISBN: 0 262 52423 6; Paperback; 390pp.; * pound22.95/$35.00.
    Brief Bioinform, Vol. 7, No. 2. (2006), pp. 204-206.
    by Santiago Schnell
    posted to bibtex-import by schnell to the group IU_Informatics_CX on 2006-10-26 04:54:06 as ***
  • Enzyme kinetics of multiple alternative substrates
    Journal of Chemistry, Vol. V27, No. 1. (13 October 2000), pp. 155-170.
    by S Schnell, C Mendoza
    posted to alternative curves enzyme fitting kinetics multiple procedure progress substrates w-function by schnell to the group IU_Informatics_CX on 2006-10-26 04:50:14 as ***
  • Mechanism Equivalence in Enzyme-Substrate Reactions: Distributed Differential Delay in Enzyme Kinetics
    Journal of Chemistry, Vol. V35, No. 3. (21 March 2004), pp. 253-264.
    by R Hinch, S Schnell
    posted to delay differential distinguishable distributed enzyme equivalent intermediates kinetics mechanisms reaction by schnell to the group IU_Informatics_CX on 2006-10-26 04:49:08 as ***
  • How reaction kinetics with time-dependent rate coefficients differs from generalized mass action.
    ChemPhysChem, Vol. 7, No. 7. (17 July 2006), pp. 1422-1424.
    by R Grima, S Schnell
    posted to coefficients environments intracellular kinetics low-dimensional mechanisms media rate reaction time-dependent by schnell to the group IU_Informatics_CX on 2006-10-26 04:43:27 as ****
  • Use and abuse of the quasi-steady-state approximation.
    Syst Biol (Stevenage), Vol. 153, No. 4. (July 2006), pp. 187-191.
    by EH Flach, S Schnell
    posted to enzyme-substrate metabolic modelling open quasi-steady-state reaction reactions by schnell to the group IU_Informatics_CX on 2006-10-26 04:40:20 as ****
  • Clock and induction model for somitogenesis.
    Dev Dyn, Vol. 217, No. 4. (April 2000), pp. 415-420.
    by S Schnell, PK Maini
    posted to clock formation lunatic-fringe notch pathway pattern segmentation somitogenesis by schnell to the group IU_Informatics_CX on 2006-10-26 04:38:43 as ****
  • A fast method to estimate kinetic constants for enzyme inhibitors.
    Acta Biotheor, Vol. 49, No. 2. (2001), pp. 109-113.
    by S Schnell, C Mendoza
    posted to curves enzyme fitting inhibition michaelis-menten procedure progress w-function by schnell to the group IU_Informatics_CX on 2006-10-26 04:37:27 as ***
  • A mathematical formulation for the cell-cycle model in somitogenesis: analysis, parameter constraints and numerical solutions.
    Math Med Biol, Vol. 21, No. 2. (June 2004), pp. 85-113.
    by D McInerney, S Schnell, RE Baker, PK Maini
    posted to cell cycle heat model shock somitogenesis by schnell to the group IU_Informatics_CX on 2006-10-26 04:34:07 as **
  • A multiscale mathematical model of cancer, and its use in analyzing irradiation therapies
    Theoretical Biology and Medical Modelling, Vol. 3, No. 1. (2006)
    by Benjamin Ribba, Thierry Colin, Santiago Schnell
    posted to cancer irradiation model multiscale therapies by schnell to the group IU_Informatics_CX on 2006-10-26 04:30:54 as **** along with 2 people dolchan epigenetics
  • Expression of sodium channels with different saxitoxin affinity during rat forebrain development
    Developmental Brain Research, Vol. 81, No. 1. (12 August 1994), pp. 26-40.
    by Raimundo Villegas, Cecilia Castillo, Maria E Poo, Santiago Schnell, Carolina Piernavieja, Domingo Balbi, Gloria M Villegas
    posted to affinity channel forebrain mrna receptor saxitoxin single sodium by schnell to the group IU_Informatics_CX on 2006-10-21 00:30:37 as ***
  • Models for pattern formation in somitogenesis: a marriage of cellular and molecular biology
    Comptes Rendus Biologies, Vol. 325, No. 3. (March 2002), pp. 179-189.
    by Santiago Schnell, Philip K Maini, Daragh Mcinerney, David J Gavaghan, Paul Houston
    posted to cell clock cycle information model movement positional segmentation somitogenesis by schnell to the group IU_Informatics_CX on 2006-10-21 00:29:58 as ***
  • Parametric sensitivity in chemical systems: by Arvind Varma, Massimo Morbidelli and Hua Wu, 1999. Cambridge series in chemical engineering, Cambridge University Press. [UK pound]60.00/$90.00, ISBN:[no-break space]0-521-62171-2
    Bulletin of Mathematical Biology, Vol. 66, No. 2. (March 2004), pp. 393-395.
    by Santiago Schnell
    posted to book review by schnell to the group IU_Informatics_CX on 2006-10-21 00:29:23 as ***
  • Bulletin of mathematical biology--facts, figures and comparisons
    Bulletin of Mathematical Biology, Vol. 66, No. 4. (July 2004), pp. 595-603.
    by Philip K Maini, Santiago Schnell, Sara Jolliffe
    posted to biology bulletin history mathematical by schnell to the group IU_Informatics_CX on 2006-10-21 00:28:29 as ***
  • New approaches to modelling and analysis of biochemical reactions, pathways and networks
    Progress in Biophysics and Molecular Biology, Vol. 86, No. 1. (September 2004), pp. 1-4.
    by Edmund J Crampin, Santiago Schnell
    posted to editorial by schnell to the group IU_Informatics_CX on 2006-10-21 00:27:31 as ****
  • The mechanism distinguishability problem in biochemical kinetics: The single-enzyme, single-substrate reaction as a case study
    Comptes Rendus Biologies, Vol. 329, No. 1. (January 2006), pp. 51-61.
    by Santiago Schnell, Michael J Chappell, Neil D Evans, Marc R Roussel
    posted to chemical distinguishability equivalent indistinguishability kinetically kinetics mechanisms problem structural by schnell to the group IU_Informatics_CX on 2006-10-21 00:26:59 as ****
  • Why substrate depletion has apparent first-order kinetics in enzymatic digestion
    Computational Biology and Chemistry, Vol. 30, No. 3. (June 2006), pp. 209-214.
    by J Srividhya, Santiago Schnell
    posted to apparent behavior digestion distinguishability enzyme first-order mechanism one-by-one zipper by schnell to the group IU_Informatics_CX on 2006-10-21 00:26:26 as ***
  • Unraveling the nature of the segmentation clock: Intrinsic disorder of clock proteins and their interaction map
    Computational Biology and Chemistry, Vol. 30, No. 4. (August 2006), pp. 241-248.
    by Sourav Roy, Santiago Schnell, Predrag Radivojac
    posted to clock disordered elements intrinsically molecular notch pathway proteins recognition segmentation somitogenesis by schnell to the group IU_Informatics_CX on 2006-10-21 00:25:52 as *****
  • Enzymological Considerations for the Theoretical Description of the Quantitative Competitive Polymerase Chain Reaction (QC-PCR)
    Journal of Theoretical Biology, Vol. 184, No. 4. (21 February 1997), pp. 433-440.
    by S Schnell, C Mendoza
    posted to chain competitive efficiency enzyme fitting kinetics polymerase procedure reaction by schnell to the group IU_Informatics_CX on 2006-10-21 00:24:52 as *****
  • Closed Form Solution for Time-dependent Enzyme Kinetics
    Journal of Theoretical Biology, Vol. 187, No. 2. (21 July 1997), pp. 207-212.
    by S Schnell, C Mendoza
    posted to close curve enzyme fitting form michaelis-menten procedure progress reaction solution substrate w-function by schnell to the group IU_Informatics_CX on 2006-10-21 00:23:51 as *****
  • Theoretical Description of the Polymerase Chain Reaction
    Journal of Theoretical Biology, Vol. 188, No. 3. (7 October 1997), pp. 313-318.
    by S Schnell, C Mendoza
    posted to chain curves description fitting mathematical polymerase progress reaction w-function by schnell to the group IU_Informatics_CX on 2006-10-21 00:22:33 as *****
  • Time-dependent Closed Form Solutions for Fully Competitive Enzyme Reactions
    Bulletin of Mathematical Biology, Vol. 62, No. 2. (February 2000), pp. 321-336.
    by S Schnell, C Mendoza
    posted to closed competitive curves enzyme form progress reaction reactions solution substrate w-function by schnell to the group IU_Informatics_CX on 2006-10-21 00:21:30 as ***
  • Enzyme Kinetics at High Enzyme Concentration
    Bulletin of Mathematical Biology, Vol. 62, No. 3. (May 2000), pp. 483-499.
    by S Schnell, PK Maini
    posted to approximation concentration curves enzyme fitting high michaelis-menten procedure progress quasi-steady-state reaction reverse by schnell to the group IU_Informatics_CX on 2006-10-21 00:20:08 as *****
  • A Cell Cycle Model for Somitogenesis: Mathematical Formulation and Numerical Simulation
    Journal of Theoretical Biology, Vol. 207, No. 3. (7 December 2000), pp. 305-316.
    by JR Collier, D Mcinerney, S Schnell, PK Maini, DJ Gavaghan, P Houston, CD Stern
    posted to cell cycle formation model pattern somitogenesis by schnell to the group IU_Informatics_CX on 2006-10-21 00:18:53 as ***
  • Enzyme kinetics far from the standard quasi-steady-state and equilibrium approximations
    Mathematical and Computer Modelling, Vol. 35, No. 1-2. (January 2002), pp. 137-144.
    by S Schnell, PK Maini
    posted to aggregation approximation fitting perturbation procedure quasi-steady-state singular technique total by schnell to the group IU_Informatics_CX on 2006-10-21 00:17:47 as ***
  • The condition for pseudo-first-order kinetics in enzymatic reactions is independent of the initial enzyme concentration
    Biophysical Chemistry, Vol. 107, No. 2. (1 February 2004), pp. 165-174.
    by S Schnell, C Mendoza
    posted to constants curves fitting flooding kinetics method michaelismenten procedure progress pseudo-first-order rate reaction by schnell to the group IU_Informatics_CX on 2006-10-21 00:16:55 as ****
  • Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws.
    Prog Biophys Mol Biol, Vol. 85, No. 2-3. (l 2004), pp. 235-260.
    by S Schnell, TE Turner
    posted to crowding effect enzyme exclusion fractal-like intracellular kinetics reaction reactions volume by schnell to the group IU_Informatics_CX on 2006-10-21 00:15:44 as ***** along with 3 people m_j ras csanford
  • Stochastic approaches for modelling in vivo reactions
    Computational Biology and Chemistry, Vol. 28, No. 3. (July 2004), pp. 165-178.
    by TE Turner, S Schnell, K Burrage
    posted to algorithm approximation conditions crowding fractal-like intracellular kinetics macromolecular method modelling quasi-steady-state reaction simulation stochastic tau-leap by schnell to the group IU_Informatics_CX on 2006-10-21 00:13:56 as ***** along with 6 people and 2 groups brain jjray balabu roland_ewald insectopalo gabe_rosser dIEMoSIRIS MoSi-Rostock
  • Mathematical and computational techniques to deduce complex biochemical reaction mechanisms.
    Prog Biophys Mol Biol, Vol. 86, No. 1. (September 2004), pp. 77-112.
    by EJ Crampin, S Schnell, PE McSharry
    posted to biochemistry computational kinetics mathematical mechanism reaction techniques by schnell to the group IU_Informatics_CX on 2006-10-21 00:11:27 as **** along with 3 people and 3 groups alexr aheilbut dagmar Autoregulation dIEMoSIRIS compneur
  • A clock and wavefront mechanism for somite formation
    Developmental Biology, Vol. 293, No. 1. (1 May 2006), pp. 116-126.
    by RE Baker, S Schnell, PK Maini
    posted to clock embryology fgf-8 formation gradient pattern segmentation somitogenesis wavefront by schnell to the group IU_Informatics_CX on 2006-10-21 00:10:15 as ****
  • A systematic investigation of the rate laws valid in intracellular environments
    Biophysical Chemistry, Vol. 124, No. 1. (20 October 2006), pp. 1-10.
    by R Grima, S Schnell
    posted to biochemistry crowding environments intracellular kinetics macromolecular reaction by schnell to the group IU_Informatics_CX on 2006-10-21 00:07:16 as *****
  • Evidence of Hyperplanes in the Genetic Learning of Neural Networks
    Biological Cybernetics, Vol. 66 (1992), pp. 283-289.
    by F Menczer, D Parisi
    posted to alife ga networks neural by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • Recombination and unsupervised learning: Effects of crossover in the genetic optimization of neural networks
    Network, Vol. 3 (1992), pp. 423-442.
    by F Menczer, D Parisi
    posted to alife ga networks neural by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • A Model for the Emergence of Sex in Evolving Networks: Adaptive Advantage or Random Drift?
    (1992)
    by F Menczer, D Parisi
    edited by F Varela, P Bourgine
    posted to alife ga networks neural by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • LEE: A Tool for Artificial Life Simulations
    No. CS93-301. (1993)
    by F Menczer, RK Belew
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • LEE: A Model for Artificial Life Complexity
    No. CS93-298. (1993)
    by F Menczer, RK Belew
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • Evolving sensors in environments of controlled complexity
    (1994)
    by F Menczer, RK Belew
    edited by R Brooks, P Maes
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • An Endogenous Fitness Paradigm for Adaptive Information Agents
    (1994)
    by F Menczer, W Willuhn, RK Belew
    posted to alife crawling web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:34 as read
  • Changing Latent Energy Environments: A Case for the Evolution of Plasticity
    No. CS94-336. (1994)
    by F Menczer
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • Internet: Vita da ragni
    Sistemi Intelligenti, Vol. 7, No. 3. (1995), pp. 421-442.
    by F Menczer
    posted to alife crawling web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • Artificial Life Applied to Adaptive Information Agents
    (1995)
    by F Menczer, RK Belew, W Willuhn
    posted to alife crawling web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • From Complex Environments to Complex Behaviors
    Adaptive Behavior, Vol. 4 (1996), pp. 317-363.
    by F Menczer, RK Belew
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • Latent Energy Environments
    (1996)
    by F Menczer, RK Belew
    edited by RK Belew, M Mitchell
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • Maturation and the evolution of imitative learning in artificial organisms
    Adaptive Behavior, Vol. 4, No. 1. (1996), pp. 27-48.
    by F Cecconi, F Menczer, RK Belew
    posted to alife lee by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • ARACHNID: Adaptive Retrieval Agents Choosing Heuristic Neighborhoods for Information Discovery
    (1997), pp. 227-235.
    by F Menczer
    posted to adaptive crawling web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • ARACHNID Software Demo
    (1997)
    by F Menczer, RK Belew
    posted to adaptive crawling web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
  • Life-like agents: Internalizing local cues for reinforcement learning and evolution
    (1998)
    by F Menczer
    posted to agents alife crawling ga lee web by fil to the group IU_Informatics_CX on 2006-03-07 23:59:33 as read
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