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Group: biomedical-nlp - library [452 articles]

Недавние статьи, отправленные по почте членами biomedical-nlp группы
  • The Rough Guide to Climate Change 1 (Rough Guide Reference)
    (30 October 2006)
    by Robert Henson
    posted to no-tag by caporaso to the group biomedical-nlp on 2007-04-27 13:45:58 as **
  • Lonesome George : The Life and Loves of a Conservation Icon
    (04 April 2006)
    by Henry Nicholls
    posted to conservation by caporaso to the group biomedical-nlp on 2007-04-27 13:45:11 as ***** along with 3 people and 1 group dayjm cmm Fin FAB-lab
  • A Quarter Century of UNIX (Addison-Wesley UNIX and Open Systems Series)
    (31 May 1994)
    by Peter H Salus
    posted to unix cs by caporaso to the group biomedical-nlp on 2007-04-18 01:12:09 as **
  • Automatic Extraction of Protein Point Mutations Using a Graph Bigram Association
    PLoS Computational Biology, Vol. 3, No. 2. (1 February 2007), e16.
    by Lawrence C Lee, Florence Horn, Fred E Cohen
    posted to nlp mutation by caporaso to the group biomedical-nlp on 2007-04-17 17:36:43 as read along with 2 people and 1 group aalibes yas T_lab
  • Text-mining and information-retrieval services for molecular biology.
    Genome Biol, Vol. 6, No. 7. (2005)
    by M Krallinger, A Valencia
    posted to nlp bioinformatics by caporaso to the group biomedical-nlp on 2007-04-17 03:53:19 as **** along with 8 people and 5 groups spinaltap526 irenas Enro carlblesius textoris yas shimah78us cjeans dbk-lab Blog_and_Wiki_Research mgh-lcs hst-bmi T_lab
  • Is cross-validation better than resubstitution for ranking genes?
    Bioinformatics, Vol. 20, No. 2. (22 January 2004), pp. 253-258.
    by Ulisses Braga-Neto, Ronaldo Hashimoto, Edward R Dougherty, Danh V Nguyen, Raymond J Carroll
    posted to cross-validation bioinformatics by caporaso to the group biomedical-nlp on 2007-03-30 15:10:25 as ** along with 2 people chad_davis rdiaz
  • Is cross-validation valid for small-sample microarray classification?
    Bioinformatics, Vol. 20, No. 3. (12 February 2004), pp. 374-380.
    by Ulisses M Braga-Neto, Edward R Dougherty
    posted to cross-validation bioinformatics by caporaso to the group biomedical-nlp on 2007-03-30 15:08:04 as ** along with 3 people chad_davis sdvillal sampath
  • Bolstered Error Estimation
    by Ulisses B Neto, Edward Dougherty
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-30 14:53:27 as *****
  • No Unbiased Estimator of the Variance of K-Fold Cross-Validation
    J. Mach. Learn. Res., Vol. 5 (2004), pp. 1089-1105.
    by Yoshua Bengio, Yves Grandvalet
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 23:10:46 as ****
  • Inference for the Generalization Error
    Mach. Learn., Vol. 52, No. 3. (September 2003), pp. 239-281.
    by Claude Nadeau, Yoshua Bengio
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 23:09:40 as ** along with 1 person sdvillal
  • Inference for the generalization error
    (2000)
    by C Nadeau, Y Bengio
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 23:08:52 as ** along with 2 people davidr gyuli
  • The Estimation of Prediction Error: Covariance Penalties and Cross-Validation
    Journal of the American Statistical Association, Vol. 99, No. 467. (September 2004), pp. 619-632.
    by Bradley Efron
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 23:07:28 as ** along with 1 group UCSD_Economics
  • No unbiased estimator of the variance of K-fold cross-validation
    (2003)
    by Y Bengio, Y Grandvalet
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 23:02:09 as **
  • Cross-validation and the bootstrap: Estimating the error rate of a prediction rule
    (1995)
    by B Efron, R Tibshirani
    posted to machine-learning cross-validation by caporaso to the group biomedical-nlp on 2007-03-27 22:58:50 as ** along with 2 people chad_davis skrofej
  • Prediction error estimation: a comparison of resampling methods
    Bioinformatics, Vol. 21, No. 15. (1 August 2005), pp. 3301-3307.
    by Annette M Molinaro, Richard Simon, Ruth M Pfeiffer
    posted to statistics machine-learning data-mining cross-validation by caporaso to the group biomedical-nlp on 2007-03-19 23:33:34 as ***** along with 1 person winterschlaefer
  • God: The Failed Hypothesis. How Science Shows That God Does Not Exist
    (25 January 2007)
    by Victor J Stenger
    posted to evolution by caporaso to the group biomedical-nlp on 2007-03-08 21:17:56 as **
  • Genomic biodiversity, phylogenetics and coevolution in proteins.
    Appl Bioinformatics, Vol. 1, No. 2. (2002), pp. 81-92.
    by DD Pollock
    posted to coevolution by caporaso to the group biomedical-nlp on 2007-02-26 18:02:10 as ***** along with 1 person chrys
  • Chemical vocabularies and ontologies for bioinformatics
    pp. 144-162.
    by K Degtyarenko
    posted to hlj-alignerror hlj-ontalign ontology by helliontroy to the group biomedical-nlp on 2006-12-28 19:20:34 as **
  • Creating the gene ontology resource: design and implementation.
    Genome Res, Vol. 11, No. 8. (August 2001), pp. 1425-1433.
    by
    posted to hlj-alignerror hlj-ontalign ontology by helliontroy to the group biomedical-nlp on 2006-12-28 19:14:45 as ** along with 5 people dgront marck CitoJam sgoetz PunkRock
  • Mapping data elements to terminological resources for integrating biomedical data sources
    BMC Bioinformatics, Vol. 7, No. Suppl 3. (2006)
    by Fleur Mougin, Anita Burgun, Olivier Bodenreider
    posted to ontology by helliontroy to the group biomedical-nlp on 2006-12-14 21:13:38 as *****
  • MAFFT version 5: improvement in accuracy of multiple sequence alignment.
    Nucleic Acids Res, Vol. 33, No. 2. (2005), pp. 511-518.
    by K Katoh, K Kuma, H Toh, T Miyata
    posted to alignment sequence by caporaso to the group biomedical-nlp on 2006-12-08 08:45:07 as ***** along with 3 people urgi rabio timflutre
  • Structural Genomics
    (2003), pp. 591-612.
    by Stephen K Burley, Jeffrey B Bonanno
    edited by Philip E Bourne, Helge Weissig
    posted to structural-genomics-consortium structure by caporaso to the group biomedical-nlp on 2006-12-07 17:06:03 as read
  • Structural Bioinformatics in Drug Discovery
    (2003), pp. 477-497.
    by Eric B Fauman, Andrew L Hopkins, Colin R Groom
    edited by Philip E Bourne, Helge Weissig
    posted to drug-design druggability structural-biology by caporaso to the group biomedical-nlp on 2006-12-07 16:46:23 as read
  • Structure Comparison and Alignment
    (2003), pp. 321-337.
    by Philip E Bourne, Ilya N Shindyalov
    edited by Philip E Bourne, Helge Weissig
    posted to alignment structural-biology structure by caporaso to the group biomedical-nlp on 2006-12-07 16:42:32 as read
  • Chemical space and biology
    Nature, Vol. 432, No. 7019. (16 December 2004), pp. 824-828.
    by Christopher M Dobson
    posted to chemistry minor-proposal by caporaso to the group biomedical-nlp on 2006-12-07 01:08:17 as ***** along with 2 people and 2 groups kuhn marcius BioinfoCIPF SGU-CIPF
  • Negation in English Speech and Writing: A Study in Variation
    Language, Vol. 69, No. 3. (1993), pp. 590-593.
    by Gunnel Tottie
    posted to negation by helliontroy to the group biomedical-nlp on 2006-12-06 21:59:08 as **
  • Filling preposition-based templates to capture information from medical abstracts.
    Pac Symp Biocomput (2002), pp. 350-361.
    by G Leroy, H Chen
    posted to relation-extraction by helliontroy to the group biomedical-nlp on 2006-12-06 21:45:53 as ***** along with 2 people and 1 group yas mircea T_lab
  • A methodology for automatic term recognition
    (1994), pp. 1034-1038.
    by Sophia Ananiadou
    posted to entity-identification by helliontroy to the group biomedical-nlp on 2006-12-06 20:31:13 as read
  • Methods for the prediction of protein-ligand binding sites for structure-based drug design and virtual ligand screening.
    Curr Protein Pept Sci, Vol. 7, No. 5. (October 2006), pp. 395-406.
    by AT Laurie, RM Jackson
    posted to drug-design minor-proposal by caporaso to the group biomedical-nlp on 2006-12-06 19:26:00 as *****
  • A shallow parser based on closed-class words to capture relations in biomedical text.
    J Biomed Inform, Vol. 36, No. 3. (June 2003), pp. 145-158.
    by G Leroy, H Chen, JD Martinez
    posted to coordination negation relation-extraction by helliontroy to the group biomedical-nlp on 2006-12-06 18:52:38 as ** along with 1 person and 1 group irenas dbk-lab
  • BRENDA, the enzyme database: updates and major new developments.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by I Schomburg, A Chang, C Ebeling, M Gremse, C Heldt, G Huhn, D Schomburg
    posted to hlj-alignerror by helliontroy to the group biomedical-nlp on 2006-12-06 18:29:31 as ** along with 4 people and 1 group sim82 alexg jberro shung Projet_ENSIMAG
  • Automatic sense disambiguation using machine readable dictionaries: how to tell a pine cone from an ice cream cone
    (1986), pp. 24-26.
    by Michael Lesk
    posted to hlj-alignerror by helliontroy to the group biomedical-nlp on 2006-12-06 18:25:32 as ** along with 2 people hehrig sboisen
  • Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies.
    Pac Symp Biocomput (2006), pp. 28-39.
    by HL Johnson, KB Cohen, WA Baumgartner, Z Lu, M Bada, T Kester, H Kim, L Hunter
    posted to hlj-alignerror me by helliontroy to the group biomedical-nlp on 2006-12-06 18:24:15 as ** along with 1 person dullhunk
  • A Resource for Constructing Customized Test Suites for Molecular Biology Entity Identification Systems
    (May June 2004), pp. 1-8.
    by Bretonnel K Cohen, Lorraine Tanabe, Shuhei Kinoshita, Lawrence Hunter
    edited by Lynette Hirschman, James Pustejovsky
    posted to hlj-alignerror by helliontroy to the group biomedical-nlp on 2006-12-06 18:17:12 as **
  • Abbreviations in biomedical text
    (2006), pp. 99-119.
    by Jt Chang, H Schutze
    edited by S Ananiadou, J Mcnaught
    posted to hlj-alignerror by helliontroy to the group biomedical-nlp on 2006-12-06 18:15:19 as **
  • An ontology for cell types.
    Genome Biol, Vol. 6, No. 2. (2005)
    by J Bard, SY Rhee, M Ashburner
    posted to hlj-alignerror hlj-ontalign ontology by helliontroy to the group biomedical-nlp on 2006-12-06 18:10:40 as ** along with 3 people and 1 group setar yas josepe T_lab
  • Biochemistry, Fifth Edition : International Version
    (15 February 2002)
    by Jeremy M Berg, John L Tymoczko, Lubert Stryer
    posted to biochem by caporaso to the group biomedical-nlp on 2006-12-05 05:10:40 as read along with 3 people and 1 group dherkova ujh paolo Bioinformatics
  • BioCreAtIvE task 1A: gene mention finding evaluation.
    BMC Bioinformatics, Vol. 6 Suppl 1 (2005)
    by A Yeh, A Morgan, M Colosimo, L Hirschman
    posted to biomedical nlp by caporaso to the group biomedical-nlp on 2006-12-04 05:35:49 as ***** along with 4 people and 1 group yas helliontroy zlu johnkork T_lab
  • Concept Recognition, Information Retrieval, and Machine Learning in Genomics Question-Answering
    (2006)
    by Gregory J Caporaso, William A Baumgartner, Hyunmin Kim, Zhiyong Lu, Helen L Johnson, Olga Medvedeva, Anna Lindemann, Lynne M Fox, Elizabeth K White, Bretonnel K Cohen, Lawrence Hunter
    posted to biomedical data-mining hunter-lab nlp by caporaso to the group biomedical-nlp on 2006-12-04 05:00:33 as ** along with 1 person helliontroy
  • TREC 2006 Genomics Track Overview
    (2006)
    by William Hersh, Aaron M Cohen, Phoebe Roberts, Hari K Rekapalli
    posted to biomedical data-mining nlp by caporaso to the group biomedical-nlp on 2006-12-04 04:52:51 as read
  • Using information theory to search for co-evolving residues in proteins.
    Bioinformatics, Vol. 21, No. 22. (15 November 2005), pp. 4116-4124.
    by LC Martin, GB Gloor, SD Dunn, LM Wahl
    posted to major-proposal information-theory comps compensatory coevolution bioi7712 by caporaso to the group biomedical-nlp on 2006-11-30 19:02:02 as read along with 4 people bioinfo rabio rsantana cjeans
  • Structure-Based Identification of Small Molecule Binding Sites Using a Free Energy Model.
    J Chem Inf Model, Vol. 46, No. 6. (27 November 2006), pp. 2631-2637.
    by Ryan G Coleman, Anna C Salzberg, Alan C Cheng
    posted to coevolution druggability by caporaso to the group biomedical-nlp on 2006-11-30 04:20:19 as **** along with 2 people tjimenez cjeans
  • FlyBase: anatomical data, images and queries.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by G Grumbling, V Strelets
    posted to comps database genomics major-proposal by caporaso to the group biomedical-nlp on 2006-11-28 23:20:33 as ** along with 1 person cmor
  • Biomedical information extraction with predicate-argument structure patterns
    (2005)
    by Akane Yakushiji, Yusuke Miyao, Yuka Tateisi, Junichi Tsujii
    posted to pas by helliontroy to the group biomedical-nlp on 2006-11-28 00:43:47 as **
  • Bootstrapping the recognition and anaphoric linking of named entities in Drosophila articles.
    Pac Symp Biocomput (2006), pp. 100-111.
    by A Vlachos, C Gasperin, I Lewin, T Briscoe
    posted to psb06 by helliontroy to the group biomedical-nlp on 2006-11-28 00:37:41 as ** along with 2 people balex vlachmore
  • The potential use of SUISEKI as a protein interaction discovery tool.
    Genome Inform, Vol. 12 (2001), pp. 123-134.
    by C Blaschke, A Valencia
    posted to ppi by helliontroy to the group biomedical-nlp on 2006-11-28 00:36:45 as **
  • Bayesian models of human sentence processing
    (1998)
    by N Srini, D Jurafsky
    posted to review by helliontroy to the group biomedical-nlp on 2006-11-28 00:35:46 as ** along with 1 person spinaltap526
  • Automatic labeling of semantic roles
    Comput. Linguist., Vol. 28, No. 3. (September 2002), pp. 245-288.
    by Daniel Gildea, Daniel Jurafsky
    posted to semantic-label by helliontroy to the group biomedical-nlp on 2006-11-28 00:34:48 as ***** along with 4 people lillejul aliku bhaddow rion
  • Linking molecular function and biological process terms in the ontology for gene expression data analysis
    Engineering in Medicine and Biology Society, 2004. EMBC 2004. Conference Proceedings. 26th Annual International Conference of the, Vol. 2 (2004), pp. 2984-2986 Vol.4.
    by M Dejongh, P Van Dort, B Ramsay
    posted to ontology by helliontroy to the group biomedical-nlp on 2006-11-28 00:30:10 as **
  • Zone analysis in biology articles as a basis for information extraction.
    Int J Med Inform (17 August 2005)
    by Yoko Mizuta, Anna Korhonen, Tony Mullen, Nigel Collier
    posted to fulltext-discourse by helliontroy to the group biomedical-nlp on 2006-11-28 00:23:58 as ***** along with 1 person and 1 group yas T_lab
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