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Ключевое слово catalysis [63 articles]

Recent papers classified by the tag catalysis.
  • Evolution of enzyme superfamilies
    Current Opinion in Chemical Biology, Vol. 10, No. 5. (October 2006), pp. 492-497.
    by Margaret E Glasner, John A Gerlt, Patricia C Babbitt
    posted to evolution enzyme catalysis by tny on 2007-01-25 03:03:50 as ** along with 4 people and 1 group kuhn robert caporaso ucbcjbm biomedical-nlp
  • Substrate-assisted catalysis: molecular basis and biological significance
    Protein Sci, Vol. 9, No. 1. (1 January 2000), pp. 1-9.
    by W Dall'acqua, P Carter
    posted to catalysis enzyme substrate-assisted by tny on 2007-04-02 13:36:44 as **
  • Metal ions in biological catalysis: from enzyme databases to general principles.
    Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry (5 July 2008)
    by Claudia Andreini, Ivano Bertini, Gabriele Cavallaro, Gemma L Holliday, Janet M Thornton
    posted to catalysis enzyme metal_binding by tny on 2008-08-08 06:22:51 as ** along with 1 person gemmalholliday
  • Hydrogen bonds and proton transfer in general-catalytic transition-state stabilization in enzyme catalysis
    Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1458, No. 1. (12 May 2000), pp. 43-62.
    by KB Schowen, Limbach, GS Denisov, RL Schowen
    posted to catalysis enzyme hydrogen_bond review by tny on 2007-04-02 14:33:18 as **
  • Enzyme promiscuity: evolutionary and mechanistic aspects
    Current Opinion in Chemical Biology, Vol. 10, No. 5. (October 2006), pp. 498-508.
    by Olga Khersonsky, Cintia Roodveldt, Dan S Tawfik
    posted to catalysis enzyme evolution by tny on 2007-04-02 12:26:25 as ** along with 4 people BragilMassoud kuhn ucbcjbm renatomilani
  • Novel cofactors via post-translational modifications of enzyme active sites
    Chemistry & Biology, Vol. 7, No. 7. (1 July 2000), pp. R159-R171.
    by Nicole M Okeley, Wilfred A van der Donk
    posted to catalysis enzyme post_translational_modification review by tny on 2007-04-02 14:36:06 as **
  • Calculating pKa values in enzyme active sites
    Protein Sci, Vol. 12, No. 9. (1 September 2003), pp. 1894-1901.
    by Jens E Nielsen, Andrew J Mccammon
    posted to catalysis enzyme pka by tny on 2007-04-02 13:56:40 as ** along with 3 people and 1 group boris_aguilar RamuAnandakrishnan qaiser_fatmi group
  • Microwave Activation of Enzymatic Catalysis
    J. Am. Chem. Soc. (10 July 2008)
    by Douglas D Young, Jason Nichols, Robert M Kelly, Alexander Deiters
    posted to catalysis by skoddet on 2008-07-30 15:40:15 as ** along with 1 person katiehumphry
  • The Chemistry of Protein Catalysis
    Journal of Molecular Biology, Vol. 372, No. 5. (5 October 2007), pp. 1261-1277.
    by GL Holliday, DE Almonacid, JBO Mitchell, JM Thornton
    posted to catalysis macie by sim82 on 2008-07-05 17:12:26 as ** along with 7 people and 2 groups barry ucbcjbm cjeans zwang grottenolm jwm gemmalholliday structural_bioinformatics Bioinformatics
  • Transition-state stabilization in the mechanism of tyrosyl-tRNA synthetase revealed by protein engineering.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 82, No. 23. (December 1985), pp. 7840-7844.
    by RJ Leatherbarrow, AR Fersht, G Winter
    posted to catalysis mutagenesis by sim82 on 2008-07-12 14:56:33 as **
  • Understanding nature's catalytic toolkit.
    Trends Biochem Sci (5 October 2005)
    by A Gutteridge, JM Thornton
    posted to catalysis catalytic by sim82 on 2008-07-07 15:07:44 as ** along with 10 people and 4 groups ana jwm Einat alexg gbart eweaver tny noby siebertm grottenolm structural_bioinformatics Radiation_Damage Stressosome Bioinformatics
  • Conformational change in substrate binding, catalysis and product release: an open and shut case?
    FEBS Lett, Vol. 567, No. 1. (1 June 2004), pp. 67-73.
    by A Gutteridge, J Thornton
    posted to catalysis changes conformational enzyme by siebertm on 2007-05-16 16:22:05 as * along with 2 people alexg gbart
  • Conformational Changes Observed in Enzyme Crystal Structures upon Substrate Binding
    Journal of Molecular Biology, Vol. 346, No. 1. (11 February 2005), pp. 21-28.
    by A Gutteridge, J Thornton
    posted to catalysis changes conformational enzyme by siebertm on 2007-05-16 16:23:37 as *
  • Metallo-enzyme catalysis.
    Chem Commun (Camb), No. 10. (21 May 2003), pp. 1109-1113.
    by RJ Williams
    posted to catalysis ions metal metallo-enzyme by siebertm on 2007-05-15 13:53:51 as **
  • Multiple conformational changes in enzyme catalysis.
    Biochemistry, Vol. 41, No. 26. (2 July 2002), pp. 8221-8228.
    by GG Hammes
    posted to catalysis changes conformational entropy enzyme by siebertm on 2007-05-16 16:20:31 as * along with 2 people lna nigham
  • Electrocatalytic reduction of oxygen and hydrogen peroxide at poly(p-aminobenzene sulfonic acid)-modified glassy carbon electrodes
    Journal of Molecular Catalysis A: Chemical, Vol. 278, No. 1-2. (14 December 2007), pp. 244-250.
    by Ashok S Kumar, Shen-Ming Chen
    posted to and catalysis hydrogen oxygen peroxide by sakumar80 on 2008-03-05 10:32:41 as *****
  • Structural Model of the R State of Escherichia coli Aspartate Transcarbamoylase with Substrates Bound
    Journal of Molecular Biology, Vol. 371, No. 5. (31 August 2007), pp. 1261-1273.
    by Jie Wang, Joby Eldo, Evan R Kantrowitz
    posted to allostery catalysis enzyme by ruvido on 2007-08-09 14:39:45 as **
  • Hydride transfer catalysed by Escherichia coli and Bacillus subtilis dihydrofolate reductase: coupled motions and distal mutations.
    Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1472. (29 August 2006), pp. 1365-1373.
    by S Hammes-Schiffer, JB Watney
    posted to binding catalysis chemistry dhfr enzyme kinetics ligands mutations qmm review simulation by ruvido on 2006-12-21 14:27:31 as **
  • Free-Energy Landscape of Enzyme Catalysis
    Biochemistry, Vol. 47, No. 11. (18 March 2008), pp. 3317-3321.
    by Stephen J Benkovic, Gordon G Hammes, Sharon Hammes-Schiffer
    posted to catalysis dhfr energy_landscape enzyme free-energy by ruvido on 2008-04-07 11:36:53 as **
  • Correlated motion and the effect of distal mutations in dihydrofolate reductase.
    Proc Natl Acad Sci U S A, Vol. 100, No. 12. (10 June 2003), pp. 6980-6985.
    by TH Rod, JL Radkiewicz, CL Brooks
    posted to binding catalysis chemistry dhfr enzyme ligands md motion mutations protein simulation by ruvido on 2006-12-21 14:20:49 as **
  • Coupling of protein motions and hydrogen transfer during catalysis by Escherichia coli dihydrofolate reductase.
    Biochem J, Vol. 394, No. Pt 1. (15 February 2006), pp. 259-265.
    by RS Swanwick, G Maglia, LH Tey, RK Allemann
    posted to binding catalysis dhfr enzyme kinetics ligands motion nmr transition by ruvido on 2006-12-21 14:18:38 as **
  • Theoretical insights in enzyme catalysis
    Chem. Soc. Rev., Vol. 33, No. 2. (2004), pp. 98-107.
    by S Marti?, M Roca, J Andre?s, V Moliner, E Silla, I Tun?o?n, J Bertra?n
    posted to catalysis enzyme review by ruvido on 2007-02-15 14:33:46 as **
  • Modelling enzyme reaction mechanisms, specificity and catalysis
    Drug Discovery Today, Vol. 10, No. 20. (15 October 2005), pp. 1393-1402.
    by Adrian J Mulholland
    posted to catalysis enzyme review by ruvido on 2007-02-15 14:39:53 as **
  • Impact of distal mutations on the network of coupled motions correlated to hydride transfer in dihydrofolate reductase.
    Proc Natl Acad Sci U S A, Vol. 102, No. 19. (10 May 2005), pp. 6807-6812.
    by KF Wong, T Selzer, SJ Benkovic, S Hammes-Schiffer
    posted to binding catalysis chemistry dhfr enzyme kinetics ligands md motion mutations simulation by ruvido on 2006-12-21 14:23:16 as **
  • Coupling between Catalytic Site and Collective Dynamics: A Requirement for Mechanochemical Activity of Enzymes
    Structure, Vol. 13, No. 6. (June 2005), pp. 893-904.
    by Lee-Wei Yang, Ivet Bahar
    posted to catalysis enzyme normal_modes by ruvido on 2007-05-09 17:59:47 as **
  • Mechanism in homogeneous catalysis; NMR as a prime mover
    Journal of Organometallic Chemistry, Vol. 689, No. 24. (29 November 2004), pp. 4006-4015.
    by John M Brown
    posted to catalysis by pricerd on 2004-11-24 08:40:26
  • Computational Enzymatic Catalysis
    Acc. Chem. Res. (9 May 2008)
    by Maria J Ramos, Pedro A Fernandes
    posted to catalysis enzyme simulation by paulschlesinger on 2008-05-12 19:36:31 as **
  • Allosteric regulation and catalysis emerge via a common route
    Nat Chem Biol, Vol. 4, No. 8. (2008), pp. 474-482.
    by Nina M Goodey, Stephen J Benkovic
    posted to allostery catalysis by paulschlesinger on 2008-07-20 02:14:39 as **
  • Computational identification of obligatorily autocatalytic replicators embedded in metabolic networks
    Genome Biology, Vol. 9, No. 3. (2008)
    by Adam Kun, Balazs Papp, Eors Szathmary
    posted to bioinformatics catalysis metabolomics network by neils on 2008-03-10 22:26:04 as ** along with 3 people fernan grahamc roys
  • Kemp elimination catalysts by computational enzyme design
    Nature (19 March 2008)
    by Daniela Röthlisberger, Olga Khersonsky, Andrew M Wollacott, Lin Jiang, Jason Dechancie, Jamie Betker, Jasmine L Gallaher, Eric A Althoff, Alexandre Zanghellini, Orly Dym, Shira Albeck, Kendall N Houk, Dan S Tawfik, David Baker
    posted to catalysis computational design enzyme by neils on 2008-05-10 03:10:52 as ** along with 5 people and 1 group jwm msuarezdiez austin cactus sobolevnrm baker-group
  • Carbon-Hydrogen Bond Activation: Two, Three, or More Mechanisms?
    J. Am. Chem. Soc., Vol. 129, No. 40. (10 October 2007), pp. 12068-12069.
    by BA Vastine, MB Hall
    posted to catalysis by karmarae on 2007-10-04 02:30:12 as read
  • A Predictably Selective Aliphatic C H Oxidation Reaction for Complex Molecule Synthesis
    Science, Vol. 318, No. 5851. (2 November 2007), pp. 783-787.
    by Mark S Chen, Christina M White
    posted to catalysis by karmarae on 2007-11-03 03:39:36 as *****
  • Understanding and exploiting C-H bond activation
    Nature, Vol. 417, No. 6888. (30 May 2002), pp. 507-514.
    by Jay A Labinger, John E Bercaw
    posted to catalysis by karmarae on 2007-10-04 02:29:40 as read
  • Fe-Doped Trititanate Nanotubes: Formation, Optical and Magnetic Properties, and Catalytic Applications
    J. Phys. Chem. C (8 September 2007)
    by WQ Han, W Wen, D Yi, Z Liu, MM Maye, L Lewis, J Hanson, O Gang
    posted to catalysis by karmarae on 2007-09-11 16:53:10 as **
  • Intrinsic dynamics of an enzyme underlies catalysis
    Nature, Vol. 438, No. 7064., pp. 117-121.
    by Elan Z Eisenmesser, Oscar Millet, Wladimir Labeikovsky, Dmitry M Korzhnev, Magnus Wolf-Watz, Daryl A Bosco, Jack J Skalicky, Lewis E Kay, Dorothee Kern
    posted to catalysis nmr protein_dynamics by karbak on 2006-02-12 08:00:06 as **** along with 6 people BragilMassoud lna dlr tny jlh64 rph
  • In Situ Spectroscopic Study of the Oxidation and Reduction of Pd(111)
    J. Am. Chem. Soc., Vol. 127, No. 51. (28 December 2005), pp. 18269-18273.
    by G Ketteler, DF Ogletree, H Bluhm, H Liu, ELD Hebenstreit, M Salmeron
    posted to catalysis oxidation palladium spectroscopy xps by guidoketteler on 2008-07-21 12:48:08 as read
  • A template search reveals mechanistic similarities and differences in beta-ketoacyl synthases (KAS) and related enzymes.
    Proteins, Vol. 52, No. 3. (15 August 2003), pp. 427-435.
    by JH Dawe, CT Porter, JM Thornton, AB Tabor
    posted to catalysis enzyme mechanism template by gbart on 2005-11-11 15:34:52 as **
  • MACiE: a database of enzyme reaction mechanisms.
    Bioinformatics (27 September 2005)
    by Gemma L L Holliday, Gail J J Bartlett, Daniel E E Almonacid, Noel M M O'boyle, Peter Murray-Rust, Janet M M Thornton, John B O B Mitchell
    posted to catalysis database enzyme macie mechanism reaction by gbart on 2005-11-11 15:15:06 as read along with 5 people eweaver tny ucbcjbm grottenolm gemmalholliday
  • Altering the regioselectivity of cytochrome P450 CYP102A3 of Bacillus subtilis by using a new versatile assay system.
    Chembiochem, Vol. 7, No. 2. (February 2006), pp. 345-350.
    by O Lentz, KA Feenstra, T Habicher, B Hauer, RD Schmid, VB Urlacher
    posted to acid am1 binding catalysis cyp docking dynamics ed enantioselective energy enzyme free lauric md mode modeling octanoic p450 path protein qm reaction simulation by feenstra on 2006-11-29 08:57:14 as *****
  • Enantioselective substrate binding in a monooxygenase protein model by molecular dynamics and docking.
    Biophys J, Vol. 91, No. 9. (1 November 2006), pp. 3206-3216.
    by KA Feenstra, K Hofstetter, R Bosch, A Schmid, JN Commandeur, NP Vermeulen
    posted to catalysis docking dynamics ed enantioselective enzyme homology lie md modeling monooxygenase oxygenase protein simulation styrene by feenstra on 2006-11-29 08:54:35 as *****
  • Predicting and Annotating Catalytic Residues: An Information Theoretic Approach
    Journal of Computational Biology, Vol. 14, No. 8. (2007), pp. 1058-1073.
    by Beckett Sterner, Rohit Singh, Bonnie Berger
    posted to catalysis protein by eskay on 2008-05-26 14:19:45 as **
  • Recent advances in DNA catalysis.
    Biopolymers (23 July 2007)
    by Claudia Höbartner, Scott K K Silverman
    posted to catalysis dna by eckart_bindewald on 2007-10-22 14:35:19 as ***
  • A general approach for the use of oligonucleotide effectors to regulate the catalysis of RNA-cleaving ribozymes and DNAzymes
    Nucl. Acids Res., Vol. 30, No. 8. (15 April 2002), pp. 1735-1742.
    by Dennis Y Wang, Beatrice H Lai, Anat R Feldman, Dipankar Sen
    posted to aptamer catalysis dna dnazyme effector oligonucleotide ribozyme rna by eckart_bindewald on 2007-11-06 16:20:55 as ***
  • Structural framework for catalysis and regulation in ribulose-1,5-bisphosphate carboxylase/oxygenase
    Archives of Biochemistry and Biophysics, Vol. 414, No. 2. (15 June 2003), pp. 130-140.
    by Inger Andersson, Thomas C Taylor
    posted to catalysis regulation rubisco structure by dylan77 on 2007-04-19 09:10:45 as **
  • Giant Pd-561 clusters: onset to new catalytic properties
    Journal of Molecular Catalysis A: Chemical, Vol. 146, No. 1-2. (20 October 1999), pp. 229-236.
    by Mykhailo K Starchevsky, Serhiy L Hladiy, Yuriy A Pazdersky, Mikhail N Vargaftik, Illia I Moiseev
    posted to 561 catalysis pd by davidpearmain on 2008-06-15 23:26:06 as **
  • Catalytic activity of Au nanoparticles
    Nano Today, Vol. 2, No. 4. (August 2007), pp. 14-18.
    by Britt Hvolbæk, Ton V Janssens, Bjerne S Clausen, Hanne Falsig, Claus H Christensen, Jens K Nørskov
    posted to au catalysis by davidpearmain on 2008-06-15 23:57:28 as **
  • Model studies on heterogeneous catalysts at the atomic level
    Catalysis Today, Vol. 100, No. 1-2. (15 February 2005), pp. 3-9.
    by Hans-Joachim Freund
    posted to catalysis by davidpearmain on 2008-08-24 11:33:31 as **
  • Z-Contrast Tomography of Nanoscale Heterogeneous Catalysts
    Microscopy and Microanalysis, Vol. 13, No. Supplement S02. (2007), pp. 1326-1327.
    by S Mehraeen, NL Okamoto, DG Morgan, S Nemana, BC Gates, H Stahlberg, ND Browning
    posted to catalysis stem by davidpearmain on 2008-08-19 13:47:29 as **
  • Two universally conserved adenosines of the group I intron that are important for self-splicing but not for core catalytic activity.
    J Biochem, Vol. 115, No. 1. (January 1994), pp. 126-130.
    by KP Williams, DN Fujimoto, T Inoue
    posted to biochemistry catalysis ribozyme by austin on 2008-01-02 04:58:33 as read
  • Control of reactions between surfactant reagents in miniemulsions. Surface nanoreactors
    Colloid & Polymer Science, Vol. 284, No. 5. (11 February 2006), pp. 459-467.
    by Valentina Vasilevskaya, Artem Aerov, Alexei Khokhlov
    posted to catalysis our by ashaytan on 2008-02-18 14:19:15 as **
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