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Ключевое слово chip-on-chip [13 articles]

Recent papers classified by the tag chip-on-chip.
  • An initial blueprint for myogenic differentiation.
    Genes Dev, Vol. 19, No. 5. (1 March 2005), pp. 553-569.
    by A Blais, M Tsikitis, D Acosta-Alvear, R Sharan, Y Kluger, BD Dynlacht
    posted to chip-on-chip by yuval on 2005-12-06 20:35:46 as ***
  • Transcriptional regulatory networks in Saccharomyces cerevisiae
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804.
    by TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, NM Hannett, CT Harbison, CM Thompson, I Simon, J Zeitlinger, EG Jennings, HL Murray, DB Gordon, B Ren, JJ Wyrick, JB Tagne, TL Volkert, E Fraenkel, DK Gifford, RA Young
    posted to chip-on-chip experimental regulation regulatory_networks s_cerevisiae transcription transcription_factors transcription_regulation by siebert on 2008-07-30 14:18:08 as read along with 26 people and 2 groups camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest dbk-lab TNT
  • Genome-Wide Location and Function of DNA Binding Proteins
    Science, Vol. 290, No. 5500. (22 December 2000), pp. 2306-2309.
    by Bing Ren, Francois Robert, John J Wyrick, Oscar Aparicio, Ezra G Jennings, Itamar Simon, Julia Zeitlinger, Jorg Schreiber, Nancy Hannett, Elenita Kanin, Thomas L Volkert, Christopher J Wilson, Stephen P Bell, Richard A Young
    posted to chip-on-chip chip by miguel on 2007-02-07 20:21:38 as ** along with 7 people kaarsinogen johncumbers tvdbulck epigenetics yevishere kristallreiner dquest
  • Genome-scale ChIP-chip analysis using 10,000 human cells.
    Biotechniques, Vol. 43, No. 6. (December 2007), pp. 791-797.
    by LG Acevedo, AL Iniguez, HL Holster, X Zhang, R Green, PJ Farnham
    posted to chip-on-chip method by idonaldson on 2008-02-12 17:08:47 as ** along with 1 person jyuh
  • W-AlignACE: An improved Gibbs sampling algorithm based on more accurate position weight matrices learned from sequence and gene expression/ChIP-chip data.
    Bioinformatics (5 March 2008)
    by Xin Chen, Lingqiong Guo, Zhaocheng Fan, Tao Jiang
    posted to chip-chip chip-on-chip motif-discovery tool by idonaldson on 2008-04-25 14:11:01 as ** along with 2 people maximilianh isimpson
  • Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies
    Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 898-909.
    by Ghia M Euskirchen, Joel S Rozowsky, Chia-Lin Wei, Wah H Lee, Zhengdong D Zhang, Stephen Hartman, Olof Emanuelsson, Viktor Stolc, Sherman Weissman, Mark B Gerstein, Yijun Ruan, Michael Snyder
    posted to chip-on-chip chip-seq comparison by idonaldson on 2008-02-20 14:32:15 as ** along with 6 people and 4 groups kengg jtaylor ghattem epigenetics blobbybirdman isimpson Bioinformatics Plantandetc UH - Computational Biology BergmanLab
  • Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
    Genome Res. (7 February 2008), gr.7080508.
    by David S Johnson, Wei Li, Benjamin D Gordon, Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S Carroll, Myles Brown, Paul Flicek, Christopher M Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J Farnham, Philipp Kapranov, David A Nix, Thomas R Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland Green, Jun S Song, Scott A Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M Myers, Jason D Lieb, Shirley X Liu
    posted to chip-on-chip comparison by idonaldson on 2008-02-12 17:07:30 as *** along with 11 people and 2 groups jfr kengg djkt xiaobeizhao cabbagezs caseybrown magusina lp2 stajich gracio gdb BergmanLab Berkeley Mycology
  • Lyl1 Interacts with CREB1 and Alters Expression of CREB1 Target Genes.
    Biochim Biophys Acta (7 December 2007)
    by Serban San-Marina, Youqi Han, Fernando Suarez Saiz, Michael R R Trus, Mark D D Minden
    posted to chip-on-chip creb lyl by idonaldson on 2008-01-03 12:01:49 as **
  • ChIPping away at gene regulation.
    EMBO reports, Vol. 9, No. 4. (April 2008), pp. 337-343.
    by CE Massie, IG Mills
    posted to chip-chip chip-on-chip review by idonaldson on 2008-07-08 10:53:50 as *** along with 1 person yoonk
  • CMARRT: a tool for the analysis of ChIP-chip data from tiling arrays by incorporating the correlation structure.
    Pac Symp Biocomput (2008), pp. 515-526.
    by PF Kuan, H Chun, S Keleş
    posted to chip-on-chip tool by idonaldson on 2008-02-04 13:14:00 as *** along with 1 person jfr
  • A computational genomics approach to identify cis-regulatory modules from chromatin immunoprecipitation microarray data--A case study using E2F1.
    Genome Res (19 October 2006)
    by Victor X X Jin, Alina Rabinovich, Sharon L L Squazzo, Roland Green, Peggy J J Farnham
    posted to chip-on-chip crm tfbs tool by idonaldson on 2007-11-08 08:50:56 as ***** along with 2 people aprasad jfr
  • Model-based deconvolution of genome-wide DNA binding.
    Bioinformatics (1 December 2007)
    by David J J Reiss, Marc T T Facciotti, Nitin S S Baliga
    posted to chip-on-chip deconvolution tfbs by idonaldson on 2008-01-31 11:10:21 as *** along with 5 people djkt yevishere jyuh vega isimpson
  • ChIP-on-chip significance analysis reveals ubiquitous transcription factor binding
    BMC Bioinformatics, Vol. 8, No. Suppl 8. (2007)
    by Adam Margolin, Teresa Palomero, Adolfo Ferrando, Andrea Califano, Gustavo Stolovitzky
    posted to analysis chip-on-chip significance by bryankr on 2008-08-26 16:37:47 as ***
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