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Ключевое слово enzyme [325 articles]

Recent papers classified by the tag enzyme.
  • EzCatDB: the Enzyme Catalytic-mechanism Database.
    Nucleic Acids Res, Vol. 33 Database Issue (1 January 2005)
    by N Nagano
    posted to bioinformatics enzyme by ziquje on 2005-02-22 16:22:09 as **** along with 4 people sim82 Jporci eweaver tny
  • Discovering potent and selective reversible inhibitors of enzymes in complex proteomes
    Nat Biotech, Vol. 21, No. 6. (June 2003), pp. 687-691.
    by Donmienne Leung, Christophe Hardouin, Dale L Boger, Benjamin F Cravatt
    posted to enzyme targetbeads by Yanno on 2006-05-28 16:12:42 as read
  • Enzyme family–specific and activity-based screening of chemical libraries using enzyme microarrays
    Nature Biotechnology, Vol. 23, No. 5. (10 April 2005), pp. 622-627.
    by Daniel P Funeriu, Jörg Eppinger, Lucile Denizot, Masato Miyake, Jun Miyake
    posted to chip drugdiscovery enzyme hts by Yanno on 2006-05-16 08:28:04 as read
  • Do-it-yourself enzymes
    Nat Chem Biol, Vol. 4, No. 5. (May 2008), pp. 273-275.
    by Vikas Nanda
    posted to newsviews enzyme bioinformatics by Yanno on 2008-04-28 15:07:37 as read
  • Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited
    Nat Chem Biol, Vol. 2, No. 2. (February 2006), pp. 87-94.
    by Brian P English, Wei Min, Antoine M van Oijen, Kang T Lee, Guobin Luo, Hongye Sun, Binny J Cherayil, SC Kou, Sunney X Xie
    posted to catlaysis enzyme kinetics michaelis-menten by xico on 2006-01-29 20:31:01 as **** along with 1 person and 1 group shuns WetBiology
  • A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases.
    BMC Bioinformatics, Vol. 5, No. 1. (9 June 2004)
    by ML Green, PD Karp
    posted to bayesian enzyme metabolism pathway by wnpx on 2006-07-26 20:53:49 as ** along with 3 people tmmurali eweaver shung
  • Evolution of glyoxylate cycle enzymes in Metazoa: evidence of multiple horizontal transfer events and pseudogene formation
    Biology Direct, Vol. 1 (23 October 2006), 31.
    by Fyodor A Kondrashov, Eugene V Koonin, Igor G Morgunov, Tatiana V Finogenova, Marie N Kondrashova
    posted to enzyme horizontal_gene_transfer icl ms multifunctional_enzyme by tny on 2006-12-07 06:57:01 as **
  • Modular Enzyme Design: Regulation by Mutually Exclusive Protein Folding
    Journal of Molecular Biology, Vol. 357, No. 4. (7 April 2006), pp. 1058-1062.
    by Jeung-Hoi Ha, James S Butler, Diana M Mitrea, Stewart N Loh
    posted to domain enzyme example by tny on 2006-06-06 10:20:20 as **
  • Origin and evolution of the peroxisomal proteome
    Biology Direct, Vol. 1 (23 March 2006), 8.
    by Toni Gabaldón, Berend Snel, Frank van Zimmeren, Wieger Hemrika, Henk Tabak, Martijn A Huynen
    posted to enzyme evolution peroxisome by tny on 2006-06-13 03:16:08 as ** along with 1 person dquest
  • The complement of enzymatic sets in different species.
    J Mol Biol, Vol. 349, No. 4. (17 June 2005), pp. 745-763.
    by S Freilich, RV Spriggs, RA George, B Al-Lazikani, M Swindells, JM Thornton
    posted to catalytic enzyme by tny on 2006-01-31 05:55:48 as ** along with 2 people jwm gbart
  • Metabolic efficiency and amino acid composition in the proteomes of Escherichia coli and Bacillus subtilis.
    Proc Natl Acad Sci U S A, Vol. 99, No. 6. (19 March 2002), pp. 3695-3700.
    by H Akashi, T Gojobori
    posted to aminoacid_composition comparative enzyme metabolism by tny on 2006-06-19 05:51:53 as ** along with 1 person bjorns
  • An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis.
    Bioinformatics, Vol. 19, No. 13. (1 September 2003), pp. 1644-1649.
    by JA Barker, JM Thornton
    posted to catalytic_site enzyme template by tny on 2006-05-09 11:12:38 as ** along with 6 people and 2 groups shadowman tjimenez jwm gbart siebertm chgjb Radiation_Damage Stressosome
  • Superfamily active site templates.
    Proteins, Vol. 55, No. 4. (1 June 2004), pp. 962-976.
    by EC Meng, BJ Polacco, PC Babbitt
    posted to catalytic_site enzyme template by tny on 2006-05-09 10:54:00 as **
  • From genomics to chemical genomics: new developments in KEGG.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by M Kanehisa, S Goto, M Hattori, KF Aoki-Kinoshita, M Itoh, S Kawashima, T Katayama, M Araki, M Hirakawa
    posted to database enzyme by tny on 2007-02-14 06:12:42 as ** along with 13 people natstreet jyuh aalibes kuhn balajis alexg eweaver dullhunk michC frohike incovoma sgoetz yggdrasil
  • Mass spectrometry and the search for moonlighting proteins.
    Mass Spectrom Rev, Vol. 24, No. 6. (c 2005), pp. 772-782.
    by CJ Jeffery
    posted to enzyme moonlighting_enzyme by tny on 2007-04-16 03:34:42 as ** along with 1 person and 2 groups marcius BioinfoCIPF SGU-CIPF
  • Molecular mechanisms for multitasking: recent crystal structures of moonlighting proteins.
    Curr Opin Struct Biol, Vol. 14, No. 6. (December 2004), pp. 663-668.
    by CJ Jeffery
    posted to enzyme moonlighting_enzyme review structure by tny on 2007-04-16 03:30:45 as ** along with 2 people i41m benlin
  • The 'evolvability' of promiscuous protein functions
    Nature Genetics, Vol. 37, No. 1. (28 November 2004), 73.
    by Amir Aharoni, Leonid Gaidukov, Olga Khersonsky, Stephen M Gould, Cintia Roodveldt, Dan S Tawfik
    posted to enzyme engeneering by tny on 2007-01-25 03:18:22 as ** along with 2 people jshapiro kuhn
  • Definitions of enzyme function for the structural genomics era
    Current Opinion in Chemical Biology, Vol. 7, No. 2. (April 2003), pp. 230-237.
    by Patricia C Babbitt
    posted to catalytic enzyme review by tny on 2006-05-09 06:38:34 as ** along with 2 people and 2 groups ana eweaver structural_bioinformatics Bioinformatics
  • Evolution of enzyme superfamilies
    Current Opinion in Chemical Biology, Vol. 10, No. 5. (October 2006), pp. 492-497.
    by Margaret E Glasner, John A Gerlt, Patricia C Babbitt
    posted to evolution enzyme catalysis by tny on 2007-01-25 03:03:50 as ** along with 4 people and 1 group kuhn robert caporaso ucbcjbm biomedical-nlp
  • Relation between domain evolution, specificity, and taxonomy of the alpha-amylase family members containing a C-terminal starch-binding domain
    Eur J Biochem, Vol. 270, No. 4. (15 February 2003), pp. 635-645.
    by Stefan Janecek, Birte Svensson, Ann E Macgregor
    posted to taxonomy phylogeny enzyme amylase by tny on 2007-01-23 01:08:12 as **
  • Evolution of function in protein superfamilies, from a structural perspective
    Journal of Molecular Biology, Vol. 307, No. 4. (6 April 2001), pp. 1113-1143.
    by Annabel E Todd, Christine A Orengo, Janet M Thornton
    posted to 12dec05 enzyme protein by tny on 2005-12-07 07:01:36 as *** along with 7 people and 2 groups ana kuhn chad_davis sriram_s choonpeng cdallett uz_labu_laimi structural_bioinformatics Bioinformatics
  • Enzyme promiscuity: mechanism and applications
    Trends in Biotechnology, Vol. In Press, Corrected Proof
    by Karl Hult, Per Berglund
    posted to enzyme promiscuity review by tny on 2007-04-12 10:16:43 as ** along with 2 people Jporci msuarezdiez
  • Inactive Enzyme-homologues Find New Function in Regulatory Processes
    Journal of Molecular Biology, Vol. 340, No. 3. (9 July 2004), pp. 399-404.
    by Birgit Pils, Jorg Schultz
    posted to catalytic enzyme protein review by tny on 2005-12-07 05:23:23 as ** along with 2 people jwm Jporci
  • Catalysing New Reactions during Evolution: Economy of Residues and Mechanism
    Journal of Molecular Biology, Vol. 331, No. 4. (22 August 2003), pp. 829-860.
    by Gail J Bartlett, Neera Borkakoti, Janet M Thornton
    posted to 13jan06 catalytic enzyme protein by tny on 2005-12-07 05:23:00 as ***
  • The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by CT Porter, GJ Bartlett, JM Thornton
    posted to database_issue enzyme protein by tny on 2005-12-12 12:06:58 as ** along with 8 people and 2 groups baaden chrn jwm gbart sriram_s massivemayhem siebertm grottenolm Radiation_Damage Stressosome
  • Convergent Evolution of Enzyme Active Sites Is not a Rare Phenomenon
    Journal of Molecular Biology, Vol. 372, No. 3. (21 September 2007), pp. 817-845.
    by Pier F Gherardini, Mark N Wass, Manuela Helmer-Citterich, Michael J Sternberg
    posted to convergent enzyme evolution by tny on 2007-09-04 06:45:08 as ** along with 6 people and 2 groups sim82 barry tjimenez jjray chad_davis Minty structural_bioinformatics Bioinformatics
  • Moonlighting proteins
    Trends in Biochemical Sciences, Vol. 24, No. 1. (1 January 1999), pp. 8-11.
    by Constance J Jeffery
    posted to enzyme moonlight_enzyme multifunctional_enzyme review by tny on 2007-04-10 13:41:18 as ** along with 3 people and 3 groups stevanspringer marcius benlin FAB-lab BioinfoCIPF SGU-CIPF
  • Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase
    Journal of Molecular Biology, Vol. 359, No. 3. (9 June 2006), pp. 741-753.
    by Wei-Chun Chiu, Ji-Yu You, Jai-Shin Liu, Shih-Kuang Hsu, Wen-Hwei Hsu, Chien-Hua Shih, Jenn-Kang Hwang, Wen-Ching Wang
    posted to catalytic_site enzyme example by tny on 2006-06-09 03:49:53 as **
  • Combining structural genomics and enzymology: completing the picture in metabolic pathways and enzyme active sites
    Current Opinion in Structural Biology, Vol. 10, No. 6. (1 December 2000), pp. 719-730.
    by Heidi Erlandsen, Enrique E Abola, Raymond C Stevens
    posted to catalytic_site enzyme metabolic_pathway review by tny on 2006-06-11 05:05:33 as **
  • Intrinsic dynamics of an enzyme underlies catalysis
    Nature, Vol. 438, No. 7064., pp. 117-121.
    by Elan Z Eisenmesser, Oscar Millet, Wladimir Labeikovsky, Dmitry M Korzhnev, Magnus Wolf-Watz, Daryl A Bosco, Jack J Skalicky, Lewis E Kay, Dorothee Kern
    posted to dynamics enzyme protein by tny on 2005-12-13 10:09:58 as ** along with 6 people rph BragilMassoud karbak lna dlr jlh64
  • The Three-dimensional Structure of the Bifunctional 6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase/Dihydropteroate Synthase of Saccharomyces cerevisiae
    Journal of Molecular Biology, Vol. 348, No. 3. (6 May 2005), pp. 655-670.
    by Michael C Lawrence, Peter Iliades, Ross T Fernley, Janette Berglez, Patricia A Pilling, Ian G Macreadie
    posted to enzyme enzyme_structure fas_yeast by tny on 2006-11-21 06:54:08 as **
  • Rhodobacter capsulatus OlsA Is a Bifunctional Enyzme Active in both Ornithine Lipid and Phosphatidic Acid Biosynthesis
    J. Bacteriol., Vol. 189, No. 23. (1 December 2007), pp. 8564-8574.
    by Semra Aygun-Sunar, Rahmi Bilaloglu, Howard Goldfine, Fevzi Daldal
    posted to enzyme multifunctional_enzyme by tny on 2008-02-01 10:39:16 as **
  • The role of gene fusions in the evolution of metabolic pathways: the histidine biosynthesis case
    BMC Evolutionary Biology, Vol. 7, No. Suppl 2. (2007)
    by Renato Fani, Matteo Brilli, Marco Fondi, Pietro Lio
    posted to enzyme evolution gene_fusion his_metabolism by tny on 2007-09-18 03:52:04 as **
  • Divergence of Function in Sequence-Related Groups of Escherichia coli Proteins
    Genome Res., Vol. 11, No. 8. (1 August 2001), pp. 1375-1381.
    by Laila A Nahum, Monica Riley
    posted to enzyme diversity by tny on 2007-01-22 09:21:53 as **
  • History of the enzyme nomenclature system
    Bioinformatics, Vol. 16, No. 1. (1 January 2000), pp. 34-40.
    by Keith Tipton, Sinead Boyce
    posted to enzyme review by tny on 2007-10-10 13:32:30 as ** along with 2 people and 1 group jxl robert EC
  • Evolution of Structure and Function in the o-Succinylbenzoate Synthase/N-Acylamino Acid Racemase Family of the Enolase Superfamily
    Journal of Molecular Biology, Vol. 360, No. 1. (30 June 2006), pp. 228-250.
    by Margaret E Glasner, Nima Fayazmanesh, Ranyee A Chiang, Ayano Sakai, Matthew P Jacobson, John A Gerlt, Patricia C Babbitt
    posted to enzyme evolution by tny on 2006-06-29 03:49:59 as **
  • How enzymes work: analysis by modern rate theory and computer simulations.
    Science, Vol. 303, No. 5655. (9 January 2004), pp. 186-195.
    by M Garcia-Viloca, J Gao, M Karplus, DG Truhlar
    posted to dynamics enzyme by tny on 2006-04-07 12:18:00 as ** along with 3 people BragilMassoud baaden alexg
  • Metabolic pathways in the post-genome era
    Trends in Biochemical Sciences, Vol. 28, No. 5. (May 2003), pp. 250-258.
    by Jason A Papin, Nathan D Price, Sharon J Wiback, David A Fell, Bernhard O Palsson
    posted to enzyme metabolism by tny on 2006-04-07 12:17:10 as ** along with 1 person eweaver
  • Metabolic networks: enzyme function and metabolite structure
    Current Opinion in Structural Biology, Vol. 14, No. 3. (June 2004), pp. 300-306.
    by Vassily Hatzimanikatis, Chunhui Li, Justin A Ionita, Linda J Broadbelt
    posted to enzyme metabolism metabolite by tny on 2006-04-07 12:16:57 as ** along with 3 people kuhn alexg eweaver
  • Constructing an enzyme-centric view of metabolism.
    Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2050-2055.
    by AB Horne, TC Hodgman, HD Spence, AR Dalby
    posted to enzyme metabolism by tny on 2006-04-07 12:16:32 as ** along with 2 people alexg eweaver
  • Functional cartography of complex metabolic networks
    Nature, Vol. 433, No. 7028. (24 February 2005), pp. 895-900.
    by Roger Guimera, LAN Luis
    posted to enzyme network by tny on 2006-04-07 12:02:55 as *** along with 14 people and 4 groups carlk camster dbk BioGeek Borelli lfriedl balajis alexg eweaver wnpx cjeans kdang RobMills Diego_Prada streptomyces dbk-lab kdl Bioinformatics
  • Substrate regulation of serotonin and dopamine synthesis in Drosophila
    Invertebrate Neuroscience, Vol. 5, No. 2. (October 2004), pp. 85-96.
    by Coleman, Chandra, Neckameyer, Wendi
    posted to enzyme experiment by tny on 2006-12-14 08:02:12 as **
  • A short history of the thermodynamics of enzyme-catalyzed reactions.
    J Biol Chem, Vol. 279, No. 27. (2 July 2004), pp. 27831-27836.
    by RA Alberty
    posted to thermodynamics review enzyme by tny on 2008-06-25 04:45:37 as ** along with 2 people proportional robert
  • A single locus encodes both phenylalanine hydroxylase and tryptophan hydroxylase activities in Drosophila
    The Journal Of Biological Chemistry, Vol. 267, No. 6. (25 February 1992), pp. 4199-4206.
    by WS Neckameyer, K White
    posted to enzyme experiment multifunctional_enzyme by tny on 2006-12-14 07:36:23 as **
  • Serotonin synthesis by two distinct enzymes in <I>Drosophila melanogaster</I>
    Archives of Insect Biochemistry and Physiology, Vol. 59, No. 1. (2005), pp. 12-31.
    by Chandra M Coleman, Wendi S Neckameyer
    posted to enzyme experiment by tny on 2006-12-14 07:25:59 as ** along with 1 person and 1 group dandright numberones
  • Plasticity of enzyme active sites
    Trends in Biochemical Sciences, Vol. 27, No. 8. (1 August 2002), pp. 419-426.
    by Annabel E Todd, Christine A Orengo, Janet M Thornton
    posted to catalytic enzyme review by tny on 2005-12-22 05:50:23 as ** along with 1 person shuns
  • SCOPEC: a database of protein catalytic domains.
    Bioinformatics, Vol. 20 Suppl 1 (4 August 2004)
    by RA George, RV Spriggs, JM Thornton, B Al-Lazikani, MB Swindells
    posted to catalytic database_issue domain enzyme by tny on 2006-05-19 19:09:52 as ** along with 1 person gbart
  • Designed divergent evolution of enzyme function
    Nature (22 February 2006)
    by Yasuo Yoshikuni, Thomas E Ferrin, Jay D Keasling
    posted to enzyme evolution function by tny on 2006-06-13 12:20:27 as ** along with 3 people and 2 groups lingchong marcius dbikard BioinfoCIPF SGU-CIPF
  • Network analysis of metabolic enzyme evolution in Escherichia coli.
    BMC Bioinformatics, Vol. 5 (18 February 2004)
    by S Light, P Kraulis
    posted to enzyme evolution network by tny on 2006-06-10 08:52:02 as ** along with 6 people and 1 group kuhn alexg eweaver azuma livingthingdan pekrau livingthing
  • MACiE: a database of enzyme reaction mechanisms.
    Bioinformatics (27 September 2005)
    by Gemma L L Holliday, Gail J J Bartlett, Daniel E E Almonacid, Noel M M O'boyle, Peter Murray-Rust, Janet M M Thornton, John B O B Mitchell
    posted to catalytic database_issue enzyme by tny on 2006-05-06 06:55:48 as ** along with 4 people gbart eweaver ucbcjbm grottenolm
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