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Ключевое слово genetic_regulatory_network [36 articles]

Recent papers classified by the tag genetic_regulatory_network.
  • MicroRNA regulation of human protein protein interaction network.
    RNA (24 July 2007)
    by Han Liang, Wen-Hsiung H Li
    posted to microrna genetic_regulatory_network by heliopais on 2008-06-24 15:41:28 as ** along with 4 people and 1 group andersbj fij cabbagezs maralena microRNA
  • Global and Local Architecture of the Mammalian microRNA-Transcription Factor Regulatory Network.
    PLoS Comput Biol, Vol. 3, No. 7. (13 July 2007)
    by Reut Shalgi, Daniel Lieber, Moshe Oren, Yitzhak Pilpel
    posted to genetic_regulatory_network microrna by heliopais on 2007-11-22 12:20:13 as **** along with 12 people and 2 groups OriginalLurch jfr andersbj rdiaz sebastien_vigneau ealloza zwang bootsy cabbagezs rahulthadani ale maralena Bioinformatics microRNA
  • The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states.
    Proc Natl Acad Sci U S A, Vol. 102, No. 52. (27 December 2005), pp. 19103-19108.
    by CL Barrett, CD Herring, JL Reed, BO Palsson
    posted to genetic_regulatory_network by heliopais on 2008-06-06 09:09:16 as **** along with 3 people alexg madhadron comb
  • YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae.
    Nucleic Acids Res (21 November 2007)
    by Pedro T T Monteiro, Nuno D D Mendes, Miguel C C Teixeira, Sofia d'Orey, Sandra Tenreiro, Nuno P P Mira, Hélio Pais, Alexandre P P Francisco, Alexandra M M Carvalho, Artur B B Lourenço, Isabel Sá-Correia, Arlindo L L Oliveira, Ana T T Freitas
    posted to database genetic_regulatory_network by heliopais on 2008-01-11 16:39:50 as ** along with 1 person maximilianh
  • Discovery of regulatory interactions through perturbation: inference and experimental design.
    Pac Symp Biocomput (2000), pp. 305-316.
    by TE Ideker, V Thorsson, RM Karp
    posted to genetic_regulatory_network by heliopais on 2007-10-05 10:17:12 as ***
  • A gene network inference method from continuous-value gene expression data of wild-type and mutants.
    Genome Inform Ser Workshop Genome Inform, Vol. 11 (2000), pp. 196-204.
    by KM Kyoda, M Morohashi, S Onami, H Kitano
    posted to genetic_regulatory_network by heliopais on 2007-10-05 10:16:46 as *** along with 1 person rabbat
  • Large scale statistical inference of signaling pathways from RNAi and microarray data
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Holger Froehlich, Mark Fellmann, Holger Sueltmann, Annemarie Poustka, Tim Beissbarth
    posted to genetic_regulatory_network microarray r by heliopais on 2007-10-16 08:48:04 as **** along with 2 people czeller seemu
  • Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements.
    Pac Symp Biocomput (2000), pp. 418-429.
    by AJ Butte, IS Kohane
    posted to genetic_regulatory_network information_theory network_inference by heliopais on 2008-01-16 13:45:04 as *
  • MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals.
    Mol Cell, Vol. 26, No. 5. (8 June 2007), pp. 753-767.
    by J Tsang, J Zhu, A van Oudenaarden
    posted to microrna genetic_regulatory_network by heliopais on 2008-06-23 14:35:23 as *** along with 2 people and 1 group jfr maralena microRNA
  • Advances to Bayesian network inference for generating causal networks from observational biological data
    Bioinformatics, Vol. 20, No. 18., 3594.
    by Jing Yu, Anne A Smith, Paul P Wang, Alexander J Hartemink
    posted to genetic_regulatory_network by heliopais on 2008-01-08 15:33:09 as ** along with 1 person roys
  • Predicting tissue-specific enhancers in the human genome.
    Genome Research, Vol. 17, No. 2. (8 January 2007), pp. 201-211.
    by Len AA Pennacchio, Gabriela GG Loots, Marcelo AA Nobrega, Ivan Ovcharenko
    posted to enhancer genetic_regulatory_network non_coding_dna by heliopais on 2008-01-09 10:03:03 as ***** along with 5 people and 1 group indigoviolet cwbrown maximilianh roys barwil EisenLab
  • Reverse engineering of regulatory networks in human B cells.
    Nat Genet, Vol. 37 (20 March 2005), pp. 382-390.
    by Katia Basso, Adam AA Margolin, Gustavo Stolovitzky, Ulf Klein, Riccardo Dalla-Favera, Andrea Califano
    posted to genetic_regulatory_network by heliopais on 2008-01-08 13:53:41 as **** along with 8 people snuppepuppan kentsis dragonrez jfr wnpx raiyar naegele lylu
  • Variable gene expression in eukaryotes: a network perspective
    J Exp Biol, Vol. 210, No. 9. (1 May 2007), pp. 1567-1575.
    by Patricia J Wittkopp
    posted to genetic_regulatory_network by heliopais on 2008-01-15 14:58:28 as *** along with 1 person natstreet
  • Incremental and unifying modelling formalism for biological interaction networks
    BMC Bioinformatics, Vol. 8 (08 November 2007), 433.
    by Anastasia Yartseva, Hanna Klaudel, Raymond Devillers, Francois Kepes
    posted to genetic_regulatory_network by heliopais on 2007-11-09 09:52:11 as ****
  • Using a logical model to predict the growth of yeast
    BMC Bioinformatics, Vol. 9 (12 February 2008), 97.
    by KE Whelan, RD King
    posted to genetic_regulatory_network by heliopais on 2008-02-14 13:36:39 as *** along with 1 person tmmurali
  • Tissue-specific regulatory elements in mammalian promoters
    Mol Syst Biol, Vol. 3 (16 January 2007)
    by Andrew D Smith, Pavel Sumazin, Michael Q Zhang
    posted to genetic_regulatory_network regulatory_elements by heliopais on 2008-01-11 16:35:25 as **** along with 2 people and 2 groups dchughes SeungjoonOh G4ID Genetics-of-Gambling
  • GeneNetwork: an interactive tool for reconstruction of genetic networks using microarray data.
    Bioinformatics, Vol. 20, No. 18. (12 December 2004), pp. 3691-3693.
    by CC Wu, HC Huang, HF Juan, ST Chen
    posted to genetic_regulatory_network by heliopais on 2007-10-05 10:28:32 as **
  • Growing Bayesian network models of gene networks from seed genes.
    Bioinformatics, Vol. 21, No. Suppl 2. (1 September 2005), pp. ii224-ii229.
    by JM Peña, J Björkegren, J Tegnér
    posted to genetic_regulatory_network by heliopais on 2008-01-07 11:52:35 as **** along with 5 people and 1 group abhik imouthesmp wnpx ramakris naegele ic4
  • Regulatory networks: linking microarray data to systems biology.
    Mechanisms of Ageing and Development, Vol. 128, No. 1. (January 2007), pp. 168-172.
    by Thomas Werner
    posted to genetic_regulatory_network microarray by heliopais on 2008-02-28 16:11:15 as read along with 1 person jfr
  • Genetic Properties Influencing the Evolvability of Gene Expression.
    Science (24 May 2007)
    by Christian R R Landry, Bernardo Lemos, Scott A A Rifkin, W J J Dickinson, Daniel L L Hartl
    posted to evolution genetic_regulatory_network by heliopais on 2007-10-04 09:14:55 as ** along with 10 people and 3 groups klo jjray brant balicea sebastien_vigneau grahamc emarker cisevol caseybrown emptyhb EisenLab ParkinsonLab_at_MaRS cis-regulatory-evolution
  • SYSTEMS BIOLOGY: The Scale of Prediction
    Science, Vol. 320, No. 5881. (6 June 2008), pp. 1297-1298.
    by Nitin S Baliga
    posted to newsandviews genetic_regulatory_network by heliopais on 2008-06-06 09:24:00 as read along with 3 people AlexanderPico mingzhi jago
  • Synchrony Dynamics During Initiation, Failure, and Rescue of the Segmentation Clock
    Science, Vol. 317, No. 5846. (28 September 2007), pp. 1911-1915.
    by Ingmar H Riedel-Kruse, Claudia Muller, Andrew C Oates
    posted to delta_notch genetic_regulatory_network by heliopais on 2007-10-03 13:30:53 as ** along with 2 people balabu margaritis
  • Networking an organism
    Nature Methods, Vol. 5, No. 3. (March 2008), pp. 217-217.
    by Natalie de Souza
    posted to newsandviews network_inference genetic_regulatory_network by heliopais on 2008-06-18 10:12:32 as read
  • Inferring the role of transcription factors in regulatory networks
    BMC Bioinformatics, Vol. 9 (06 May 2008), 228.
    by Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel
    posted to genetic_regulatory_network by heliopais on 2008-05-08 09:48:39 as ** along with 4 people isimpson idonaldson maralena renatomilani
  • Using Bayesian networks to analyze expression data.
    J Comput Biol, Vol. 7, No. 3-4. (2000), pp. 601-620.
    by N Friedman, M Linial, I Nachman, D Pe'er
    posted to bayesian_network genetic_regulatory_network microarray_inference by heliopais on 2008-01-11 13:48:50 as **** along with 7 people srp33 brl ldfu dragonrez Schmidtc wnpx helsley
  • Perturbations to uncover gene networks.
    Trends Genet (10 November 2006)
    by Jesper Tegnér, Johan Björkegren
    posted to genetic_regulatory_network by heliopais on 2008-01-08 13:49:08 as ** along with 4 people tmmurali aswin braingrind tvdbulck
  • Identification and control of gene networks in living organisms via supervised and unsupervised learning
    Journal of Process Control, Vol. 16, No. 3. (March 2006), pp. 303-311.
    by Michael E Driscoll, Timothy S Gardner
    posted to genetic_regulatory_network by heliopais on 2008-01-08 14:32:58 as *** along with 2 people rklancer johncumbers
  • Social regulation of gene expression in human leukocytes
    Genome Biology, Vol. 8, No. 9. (2007)
    by Steve Cole, Louise Hawkley, Jesusa Arevalo, Caroline Sung, Robert Rose, John Cacioppo
    posted to gene_expression genetic_regulatory_network socio_biology by heliopais on 2007-10-05 09:31:59 as ** along with 2 people ryanraaum hilalcite
  • An effective structure learning method for constructing gene networks
    Bioinformatics, Vol. 22, No. 11. (1 June 2006), pp. 1367-1374.
    by Chen, Xue-Wen, Anantha, Gopalakrishna, Wang, Xinkun
    posted to bayesian_network genetic_regulatory_network by heliopais on 2008-01-07 11:56:23 as * along with 1 person helsley
  • Adaptively inferring human transcriptional subnetworks.
    Mol Syst Biol, Vol. 2 (2006)
    by D Das, Z Nahlé, MQ Zhang
    posted to genetic_regulatory_network by heliopais on 2008-01-08 14:47:23 as ***** along with 4 people tmmurali wnpx Ao_Li2007 kmdaily
  • Gene regulatory networks in the evolution and development of the heart.
    Science, Vol. 313, No. 5795. (29 September 2006), pp. 1922-1927.
    by EN Olson
    posted to genetic_regulatory_network heart review by heliopais on 2007-10-25 14:09:24 as **** along with 2 people and 1 group brant dpollard EisenLab
  • A Gene Regulatory Network Subcircuit Drives a Dynamic Pattern of Gene Expression
    Science, Vol. 318, No. 5851. (2 November 2007), pp. 794-797.
    by Joel Smith, Christina Theodoris, Eric H Davidson
    posted to genetic_regulatory_network by heliopais on 2007-11-09 09:45:40 as ** along with 5 people and 1 group cwbrown lshaw shigepong zwang hpaces EisenLab
  • Comparative Sequence Analysis Reveals an Intricate Network Among REST, CREB and miRNA in Mediating Neuronal Gene Expression
    Genome Biology, Vol. 7 (26 September 2006), R85.
    by Jie Wu, Xiaohui Xie
    posted to genetic_regulatory_network microrna by heliopais on 2008-01-15 10:53:44 as *** along with 3 people and 1 group bootsy maralena diancu microRNA
  • Inferring gene regulatory networks from multiple microarray datasets
    Bioinformatics, Vol. 22, No. 19. (1 October 2006), pp. 2413-2420.
    by Yong Wang, Trupti Joshi, Xiang-Sun Zhang, Dong Xu, Luonan Chen
    posted to genetic_regulatory_network by heliopais on 2008-01-08 14:58:29 as ** along with 3 people frohike jhatrimatri natstreet
  • Inter- and intra-combinatorial regulation by transcription factors and microRNAs
    BMC Genomics, Vol. 8 (30 October 2007), 396.
    by Yiming Zhou, John Ferguson, Joseph T Chang, Yuval Kluger
    posted to microrna genetic_regulatory_network by heliopais on 2008-06-23 14:48:40 as ** along with 5 people and 1 group hpaces jfr bootsy eckart_bindewald maralena microRNA
  • Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by WK Lim, K Wang, C Lefebvre, A Califano
    posted to genetic_regulatory_network microarray by heliopais on 2008-01-08 15:21:52 as ** along with 2 people shigepong ghattem
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