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Ключевое слово key--regulatory_network [26 articles]

Recent papers classified by the tag key--regulatory_network.
  • Systematic determination of genetic network architecture.
    Nat Genet, Vol. 22, No. 3. (July 1999), pp. 281-285.
    by S Tavazoie, JD Hughes, MJ Campbell, RJ Cho, GM Church
    posted to key--gene_expression key--regulatory_network key--systems_biology tech--network_modeling by adepace to the group EisenLab on 2007-01-02 01:29:25 as **** along with 5 people and 1 group isimpson ellakat nickluscombe karfunkel maralena EBI-regulation
  • Revealing modular organization in the yeast transcriptional network.
    Nat Genet, Vol. 31, No. 4. (August 2002), pp. 370-377.
    by J Ihmels, G Friedlander, S Bergmann, O Sarig, Y Ziv, N Barkai
    posted to tech--microarray system--yeast key--regulatory_network key--modularity key--gene_expression by adepace to the group EisenLab on 2007-01-16 20:16:11 as **** along with 4 people and 1 group ellakat nickluscombe natstreet karfunkel EBI-regulation
  • Conservation of Endo16 expression in sea urchins despite evolutionary divergence in both cis and trans-acting components of transcriptional regulation.
    Development, Vol. 130, No. 17. (September 2003), pp. 4187-4199.
    by LA Romano, GA Wray
    posted to system--sea_urchin key--regulatory_network key--expression_pattern key--crm by adepace to the group EisenLab on 2007-01-17 02:28:28 as ***** along with 1 person pradiptaray
  • Defining transcription modules using large-scale gene expression data.
    Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 1993-2003.
    by J Ihmels, S Bergmann, N Barkai
    posted to tech--microarray system--yeast key--regulatory_network key--gene_expression by adepace to the group EisenLab on 2007-01-16 20:11:43 as **** along with 3 people and 2 groups tvdbulck marcius natstreet BioinfoCIPF SGU-CIPF
  • Segmenting the fly embryo: a logical analysis of the pair-rule cross-regulatory module.
    J Theor Biol, Vol. 224, No. 4. (21 October 2003), pp. 517-537.
    by L Sánchez, D Thieffry
    posted to key--gene_expression key--regulatory_network system--dmel_embryo tech--network_modeling by adepace to the group EisenLab on 2007-01-07 04:29:08 as *****
  • A logical analysis of the Drosophila gap-gene system.
    J Theor Biol, Vol. 211, No. 2. (21 July 2001), pp. 115-141.
    by L Sánchez, D Thieffry
    posted to key--gene_expression key--regulatory_network system--dmel_embryo tech--network_modeling by adepace to the group EisenLab on 2007-01-07 04:32:03 as ***** along with 2 people and 1 group bayesian dpollard UH - Computational Biology
  • A genomic regulatory network for development.
    Science, Vol. 295, No. 5560. (1 March 2002), pp. 1669-1678.
    by EH Davidson, JP Rast, P Oliveri, A Ransick, C Calestani, CH Yuh, T Minokawa, G Amore, V Hinman, C Arenas-Mena, O Otim, CT Brown, CB Livi, PY Lee, R Revilla, AG Rust, Z Pan, MJ Schilstra, PJ Clarke, MI Arnone, L Rowen, RA Cameron, DR McClay, L Hood, H Bolouri
    posted to key--expression_pattern key--gene_expression key--regulatory_network key--systems_biology system--sea_urchin tech--network_modeling tech--motif_analysis by adepace to the group EisenLab on 2007-01-07 04:23:39 as ***** along with 7 people lukaswindhager dquest edvin balajis margaritis ccr lusk
  • Known maternal gradients are not sufficient for the establishment of gap domains in Drosophila melanogaster.
    Mech Dev (14 November 2006)
    by Johannes Jaeger, David H H Sharp, John Reinitz
    posted to tech--quantitative_imaging tech--network_modeling key--regulatory_network key--morphogen key--expression_pattern by adepace to the group EisenLab on 2007-01-25 19:13:38 as *****
  • The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster.
    J Theor Biol, Vol. 223, No. 1. (7 July 2003), pp. 1-18.
    by R Albert, HG Othmer
    posted to key--expression_pattern key--regulatory_network system--dmel_embryo tech--network_modeling by adepace to the group EisenLab on 2007-01-02 01:31:15 as *****
  • Pattern formation and nuclear divisions are uncoupled in Drosophila segmentation: comparison of spatially discrete and continuous models
    Physica D: Nonlinear Phenomena, Vol. 197, No. 3-4. (15 October 2004), pp. 286-302.
    by Vitaly V Gursky, Johannes Jaeger, Konstantin N Kozlov, John Reinitz, Alexander M Samsonov
    posted to tech--network_modeling system--dmel_embryo key--segmentation key--regulatory_network key--expression_pattern gene--bcd by adepace to the group EisenLab on 2007-04-20 16:43:20 as ****
  • Inferring genetic networks and identifying compound mode of action via expression profiling.
    Science, Vol. 301, No. 5629. (4 July 2003), pp. 102-105.
    by TS Gardner, D di Bernardo, D Lorenz, JJ Collins
    posted to tech--network_modeling key--systems_biology key--regulatory_network key--gene_expression by adepace to the group EisenLab on 2007-01-16 20:05:15 as **** along with 9 people and 7 groups rklancer kentsis dragonrez rhem1224 rubendrr neveaire jayster4 heliopais roys Biostatistics Computational-Genomics Bioinformatics Neuroscience TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells
  • Co-evolution of transcriptional and post-translational cell-cycle regulation
    Nature (27 September 2006)
    by Lars J Jensen, Thomas S Jensen, Ulrik de Lichtenberg, Søren Brunak, Peer Bork
    posted to key--evolution key--gene_expression key--regulatory_network tech--microarray tech--phylogenetic_comparison by adepace to the group EisenLab on 2006-12-22 21:22:43 as ***** along with 7 people JAShapiro koller olympos ccr cjeans kluck larsjuhljensen
  • Principles of transcriptional control in the metabolic network of Saccharomyces cerevisiae.
    Nat Biotechnol, Vol. 22, No. 1. (January 2004), pp. 86-92.
    by J Ihmels, R Levy, N Barkai
    posted to system--yeast key--regulatory_network key--gene_expression by adepace to the group EisenLab on 2007-01-16 20:14:50 as *** along with 6 people and 3 groups hryk icases nickluscombe koller arne shung EBI-regulation TNT dIEMoSIRIS
  • Dynamics of Drosophila embryonic patterning network perturbed in space and time using microfluidics
    Nature, Vol. 434, No. 7037., pp. 1134-1138.
    by Elena M Lucchetta, Ji H Lee, Lydia A Fu, Nipam H Patel, Rustem F Ismagilov
    posted to system--dmel_embryo key--robustness key--regulatory_network by adepace to the group EisenLab on 2007-01-17 17:20:39 as ***** along with 1 person rklancer
  • The UBX-regulated network in the haltere imaginal disc of D. melanogaster.
    Dev Biol (10 November 2006)
    by Bradley M M Hersh, Craig E E Nelson, Samantha J J Stoll, Jason E E Norton, Thomas J J Albert, Sean B B Carroll
    posted to gene--hox key--regulatory_network system--dmel tech--microarray by adepace to the group EisenLab on 2006-12-23 17:22:30 as ***
  • Cross-species analysis of biological networks by Bayesian alignment.
    Proc Natl Acad Sci U S A, Vol. 103, No. 29. (18 July 2006), pp. 10967-10972.
    by J Berg, M Lässig
    posted to key--evolution key--regulatory_network system--mouse system--primates tech--network_modeling by adepace to the group EisenLab on 2006-12-22 21:56:16 as ** along with 2 people bpcusack jyuh
  • From DNA to Diversity: Molecular Genetics and the Evolution of Animal Design
    (15 January 2001)
    by Sean B Carroll, Jennifer K Grenier, Scott D Weatherbee
    posted to key--regulatory_network key--gene_expression key--evolution by adepace to the group EisenLab on 2007-02-05 06:00:41 as read
  • The Regulatory Genome: Gene Regulatory Networks In Development And Evolution
    (30 May 2006)
    by Eric H Davidson
    posted to key--regulatory_network key--evolution by adepace to the group EisenLab on 2007-02-05 05:58:14 as read along with 2 people and 2 groups mattjb fishtank ComplexAdaptiveSystems DSTO-CAS
  • Topology and robustness in the Drosophila segment polarity network.
    PLoS Biol, Vol. 2, No. 6. (June 2004), pp. 805-815.
    by NT Ingolia
    posted to tech--network_modeling system--dmel_embryo key--systems_biology key--segmentation key--robustness key--regulatory_network by adepace to the group EisenLab on 2007-04-20 16:50:43 as ***** along with 1 person rklancer
  • Reverse engineering of biological complexity.
    Science, Vol. 295, No. 5560. (1 March 2002), pp. 1664-1669.
    by ME Csete, JC Doyle
    posted to type--review key--systems_biology key--robustness key--regulatory_network by adepace to the group EisenLab on 2007-01-16 19:45:20 as **** along with 17 people and 5 groups bayesian edvin camster snuppepuppan barry monod lyongu wnpx ddahlem dullhunk javierFellow livingthingdan OriginalLurch anatiferous timflutre dbilar jrbanga dbk-lab structural_bioinformatics Bioinformatics livingthing clab
  • Genomic sources of regulatory variation in cis and in trans.
    Cell Mol Life Sci, Vol. 62, No. 16. (August 2005), pp. 1779-1783.
    by PJ Wittkopp
    posted to type--review key--regulatory_network key--molecular_evolution by adepace to the group EisenLab on 2007-01-27 16:01:43 as ***** along with 2 people brant mimulus_99
  • Conservation and evolution of gene coexpression networks in human and chimpanzee brains
    PNAS, Vol. 103, No. 47. (21 November 2006), pp. 17973-17978.
    by Michael C Oldham, Steve Horvath, Daniel H Geschwind
    posted to key--evolution key--gene_expression key--regulatory_network system--primates tech--microarray by adepace to the group EisenLab on 2006-12-22 21:02:52 as ** along with 7 people and 1 group giovanni balicea kengg EsepBib jeremymiller cckan nosada17 GeschwindLab
  • Evolution of alternative transcriptional circuits with identical logic
    Nature, Vol. 443, No. 7110. (2006), pp. 415-420.
    by Annie E Tsong, Brian B Tuch, Hao Li, Alexander D Johnson
    posted to key--evolution key--regulatory_network system--yeast by adepace on 2006-12-22 21:18:24 as read along with 6 people and 4 groups emptyhb marcius brant aswin srfairclough cisevol EisenLab BioinfoCIPF SGU-CIPF cis-regulatory-evolution
  • Reverse Engineering the Gap Gene Network of Drosophila melanogaster
    PLoS Computational Biology, Vol. 2, No. 5. (1 May 2006), e51.
    by Theodore J Perkins, Johannes Jaeger, John Reinitz, Leon Glass
    posted to key--regulatory_network system--dmel_embryo tech--network_modeling tech--quantitative_imaging by adepace on 2006-09-26 21:35:47 as read along with 2 people and 1 group brant emilyhare EisenLab
  • Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification.
    Proc Natl Acad Sci U S A, Vol. 103, No. 38. (19 September 2006), pp. 14062-14067.
    by SI Lee, D Pe'er, AM Dudley, GM Church, D Koller
    posted to key--chromatin key--gene_expression key--regulatory_network system--yeast tech--network_modeling by adepace on 2006-12-22 21:26:22 as **** along with 5 people and 1 group jasonflannick balajis brant stajich lp2 EisenLab
  • Identification of tightly regulated groups of genes during Drosophila melanogaster embryogenesis
    Mol Syst Biol, Vol. 3 (16 January 2007)
    by Sean D Hooper, Stephanie Boue, Roland Krause, Lars J Jensen, Christopher E Mason, Murad Ghanim, Kevin P White, Eileen EM Furlong, Peer Bork
    posted to tech--microarray system--dmel_embryo key--regulatory_network by adepace on 2007-01-22 00:13:15 as ** along with 4 people and 1 group indigoviolet dpollard uz_labu_laimi larsjuhljensen EisenLab
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