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Ключевое слово noncoding_rna [27 articles]

Recent papers classified by the tag noncoding_rna.
  • A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
    Genes Dev., Vol. 22, No. 1. (1 January 2008), pp. 8-13.
    by Alexander Stark, Natascha Bushati, Calvin H Jan, Pouya Kheradpour, Emily Hodges, Julius Brennecke, David P Bartel, Stephen M Cohen, Manolis Kellis
    posted to comparative_genomics drosophila mirna noncoding_rna by stajich on 2008-04-05 19:55:44 as ** along with 4 people and 1 group sebastien_vigneau heliopais Alexander_Kanitz maralena Berkeley Mycology
  • Arabidopsis endogenous small RNAs: highways and byways.
    Trends Plant Sci (5 August 2006)
    by Franck Vazquez
    posted to biogenesis dicer noncoding_rna review smallrna by stajich on 2008-03-18 01:27:58 as ** along with 2 people and 2 groups tardigrade cdawson GIG Berkeley Mycology
  • Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis
    Nucl. Acids Res. (16 March 2008), gkn123.
    by Christoph Jochl, Mathieu Rederstorff, Jana Hertel, Peter F Stadler, Ivo L Hofacker, Markus Schrettl, Hubertus Haas, Alexander Huttenhofer
    posted to aspergillus fungi gene_silencing noncoding_rna transcriptional_regulation by stajich on 2008-04-01 00:55:01 as ** along with 1 person and 1 group cellison Berkeley Mycology
  • Comprehensive isolation of meiosis-specific genes identifies novel proteins and unusual non-coding transcripts in Schizosaccharomyces pombe.
    Nucleic Acids Res, Vol. 29, No. 11. (1 June 2001), pp. 2327-2337.
    by T Watanabe, K Miyashita, TT Saito, T Yoneki, Y Kakihara, K Nabeshima, YA Kishi, C Shimoda, H Nojima
    posted to development noncoding noncoding_rna pombe by stajich on 2008-03-10 04:28:17 as ** along with 1 group Berkeley Mycology
  • RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
    Science (17 May 2007), 1138341.
    by Philipp Kapranov, Jill Cheng, Sujit Dike, David A Nix, Radharani Duttagupta, Aarron T Willingham, Peter F Stadler, Jana Hertel, Joerg Hackermueller, Ivo L Hofacker, Ian Bell, Evelyn Cheung, Jorg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, Thomas R Gingeras
    posted to noncoding_rna rna transcription by stajich on 2007-07-09 18:18:56 as ** along with 11 people and 4 groups xingxu marcius alexg dpollard xico mtagaya rdiaz djkt mathijsv asddd elfar EisenLab WetBiology BioinfoCIPF SGU-CIPF
  • Strategies for measuring evolutionary conservation of RNA secondary structures
    BMC Bioinformatics, Vol. 9 (26 February 2008), 122.
    by Andreas R Gruber, Stefan H Bernhart, Ivo L Hofacker, Stefan Washietl
    posted to gene_finding noncoding noncoding_rna rna rna_gene by stajich on 2008-04-01 06:25:37 as ** along with 3 people and 1 group eckart_bindewald ilh gresillaud Berkeley Mycology
  • Life without RNase P
    Nature, Vol. 453, No. 7191., pp. 120-123.
    by Lennart Randau, Imke Schröder, Dieter Söll
    posted to rnasep noncoding_rna archea by stajich on 2008-05-01 02:25:51 as ** along with 4 people and 2 groups austin kinestetika zwang neils microbiology_nijmegen Berkeley Mycology
  • Identification of a large noncoding RNA in extremophilic eubacteria.
    Proc Natl Acad Sci U S A (12 December 2006)
    by Elena Puerta-Fernandez, Jeffrey E E Barrick, Adam Roth, Ronald R R Breaker
    posted to noncoding_rna bacteria by stajich on 2007-02-02 07:23:03 as *** along with 1 person eckart_bindewald
  • Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins.
    PLoS ONE, Vol. 3, No. 2. (2008)
    by CD Warden, SH Kim, SV Yi
    posted to saccharomyces rna noncoding_rna by stajich on 2008-07-21 05:56:32 as ** along with 1 group Berkeley Mycology
  • Common Functions for Diverse Small RNAs of Land Plants.
    Plant Cell (29 June 2007)
    by Michael J J Axtell, Jo Ann A Snyder, David P P Bartel
    posted to noncoding_rna plants smallrna by stajich on 2008-04-05 19:57:31 as ** along with 1 person and 2 groups andersbj microRNA Berkeley Mycology
  • Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e65.
    by Sebastian Will, Kristin Reiche, Ivo L Hofacker, Peter F Stadler, Rolf Backofen
    posted to noncoding_rna software by stajich on 2007-04-19 22:04:59 as *** along with 5 people and 2 groups indigoviolet andersbj mtagaya zwang jayster4 EisenLab microRNA
  • Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    Genome Res. (7 November 2007), gr.6597907.
    by Graham J Ruby, Alexander Stark, Wendy K Johnston, Manolis Kellis, David P Bartel, Eric C Lai
    posted to drosophila mirna noncoding_rna sequencing by stajich on 2008-04-05 19:57:14 as ** along with 5 people and 2 groups lp2 cabbagezs heliopais urgi Alexander_Kanitz microRNA Berkeley Mycology
  • Beyond Mfold: Recent advances in RNA bioinformatics.
    J Biotechnol (9 March 2006)
    by Jens Reeder, Matthias Höchsmann, Marc Rehmsmeier, Björn Voss, Robert Giegerich
    posted to analysis gene_prediction genome noncoding noncoding_rna rna rna_gene software by stajich on 2008-03-10 23:24:36 as read along with 12 people and 4 groups reyez marcius eckart_bindewald tardigrade andersbj arcticrasta mtagaya condon Hosna Eonwe cthachuk physics microRNA beta BioinfoCIPF SGU-CIPF
  • MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen
    posted to regulatory_evolution regulation noncoding_rna mirna metazoan gene_expression by stajich on 2008-06-22 20:12:10 as ** along with 4 people and 2 groups bertelsen biozy imtechnology maralena Berkeley Mycology microRNA
  • Characterization of hypovirus-derived small RNAs generated in the chestnut blight fungus by an inducible DCL-2-dependent pathway.
    J Virol, Vol. 82, No. 6. (March 2008), pp. 2613-2619.
    by X Zhang, GC Segers, Q Sun, F Deng, DL Nuss
    posted to cryphonectria dicer mycovirus noncoding_rna rna_gene rnai rna_silencing by stajich on 2008-03-17 04:07:20 as ** along with 1 group Berkeley Mycology
  • Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans.
    Cell, Vol. 127, No. 6. (15 December 2006), pp. 1193-1207.
    by JG Ruby, C Jan, C Player, MJ Axtell, W Lee, C Nusbaum, H Ge, DP Bartel
    posted to caenorhabditis mirna noncoding_rna by stajich on 2008-03-31 19:09:45 as ** along with 3 people and 2 groups tardigrade andersbj cellison microRNA Berkeley Mycology
  • Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricus
    Molecular Microbiology, Vol. 55, No. 2., 469.
    by Thean-Hock Tang, Norbert Polacek, Marek Zywicki, Harald Huber, Kim Brugger, Roger Garrett, Jean P Bachellerie, Alexander Huttenhofer
    posted to antisense microbiology noncoding_rna by stajich on 2007-07-08 23:57:31 as **
  • Differences in vertebrate microRNA expression.
    Proc Natl Acad Sci U S A (18 September 2006)
    by Brandon Ason, Diana K K Darnell, Beate Wittbrodt, Eugene Berezikov, Wigard P P Kloosterman, Jochen Wittbrodt, Parker B B Antin, Ronald H A H Plasterk
    posted to development evolution noncoding_rna by nicg on 2006-09-26 23:55:11 as **** along with 4 people and 2 groups tardigrade andersbj mtagaya heliopais Bioinformatics microRNA
  • microRNAs as oncogenes and tumor suppressors.
    Dev Biol (16 August 2006)
    by Baohong Zhang, Xiaoping Pan, George P P Cobb, Todd A A Anderson
    posted to cancer noncoding_rna review by nicg on 2006-09-27 00:35:36 as ** along with 5 people and 2 groups maralena jyuh jfr tardigrade dchughes G4ID Genetics-of-Gambling
  • MOLECULAR BIOLOGY: A New RNA Dimension to Genome Control.
    Science, Vol. 313, No. 5785. (21 July 2006), pp. 305-306.
    by RW Carthew
    posted to gene_regulation noncoding_rna by nicg on 2006-09-27 00:31:27 as *** along with 7 people and 4 groups dayjm marcius eckart_bindewald tardigrade dchughes mtagaya jackjackjjj G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Mapping the C. elegans noncoding transcriptome with a whole-genome tiling microarray
    Genome Res. (4 September 2007), gr.6611807.
    by Housheng He, Jie Wang, Tao Liu, Shirley X Liu, Tiantian Li, Yunfei Wang, Zuwei Qian, Haixia Zheng, Xiaopeng Zhu, Tao Wu, Baochen Shi, Wei Deng, Wei Zhou, Geir Skogerbo, Runsheng Chen
    posted to noncoding_rna by cabbagezs on 2007-09-12 09:48:02 as ** along with 2 people xingxu blobbybirdman
  • Adaptive Evolution of Conserved Noncoding Elements in Mammals
    PLoS Genetics, Vol. 3, No. 9. (1 September 2007), e147.
    by Su Y Kim, Jonathan K Pritchard
    posted to noncoding_rna by cabbagezs on 2007-09-12 09:36:47 as ** along with 8 people and 5 groups mattjb livingthingdan djkt stajich Garamonfok Stew cisevol rrhudson EisenLab ComplexAdaptiveSystems DSTO-CAS livingthing cis-regulatory-evolution
  • Regulation of gene expression by small non-coding RNAs: a quantitative view
    Mol Syst Biol, Vol. 3 (2007)
    by Yishai Shimoni, Gilgi Friedlander, Guy Hetzroni, Gali Niv, Shoshy Altuvia, Ofer Biham, Hanah Margalit
    posted to expression noncoding_rna review by cabbagezs on 2007-11-05 12:01:17 as *** along with 5 people heliopais margaritis afenley vietanh0 Ema
  • Widely distributed noncoding purifying selection in the human genome
    PNAS (17 July 2007), 0705140104.
    by Saurabh Asthana, William S Noble, Gregory Kryukov, Charles E Grant, Shamil Sunyaev, John A Stamatoyannopoulos
    posted to evolution genomic noncoding_rna by cabbagezs on 2007-07-21 16:43:45 as ** along with 5 people and 1 group bpcusack pradiptaray bpb mimulus_99 cisevol cis-regulatory-evolution
  • A Computational Pipeline for High- Throughput Discovery of cis-Regulatory Noncoding RNA in Prokaryotes
    PLoS Computational Biology, Vol. 3, No. 7. (1 July 2007), e126.
    by Zizhen Yao, Jeffrey Barrick, Zasha Weinberg, Shane Neph, Ronald Breaker, Martin Tompa, Walter L Ruzzo
    posted to mirna noncoding_rna prediction by cabbagezs on 2007-07-08 13:21:17 as ** along with 4 people sebastien_vigneau zwang lp2 blobbybirdman
  • Non-coding RNA.
    Hum Mol Genet, Vol. 15, No. suppl_1. (15 April 2006)
    by John S S Mattick, Igor V V Makunin
    posted to noncoding_rna review by cabbagezs on 2008-01-02 11:44:27 as ** along with 10 people and 7 groups bertelsen tuck marcius eckart_bindewald tardigrade andersbj dchughes mtagaya scroft bsmagic Bioinformatics microRNA G4ID BioinfoCIPF bioinplant SGU-CIPF Genetics-of-Gambling
  • NONCODE v2.0: decoding the non-coding
    Nucl. Acids Res. (13 November 2007), gkm1011.
    by Shunmin He, Changning Liu, Geir Skogerbo, Haitao Zhao, Jie Wang, Tao Liu, Baoyan Bai, Yi Zhao, Runsheng Chen
    posted to database noncoding_rna by cabbagezs on 2007-11-27 08:30:50 as **
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