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Ключевое слово repeat [71 articles]

Recent papers classified by the tag repeat.
  • A universal mechanism ties genotype to phenotype in trinucleotide diseases
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 October 2007), e235.eor.
    by Shai Kaplan, Shalev Itzkovitz, Ehud Shapiro
    posted to disease repeat by winterschlaefer on 2007-10-22 09:44:09 as **
  • Empirical comparison of ab initio repeat finding programs
    Nucl. Acids Res. (20 February 2008), gkn064.
    by Surya Saha, Susan Bridges, Zenaida V Magbanua, Daniel G Peterson
    posted to comparison methods prediction repeat by tharris on 2008-06-20 16:56:25 as ** along with 5 people operon timflutre wisdom_love Ema GustavoLacerda
  • Intact recombineering of highly repetitive DNA requires reduced induction of recombination enzymes and improved host viability.
    Analytical biochemistry, Vol. 375, No. 2. (15 April 2008), pp. 394-396.
    by K Narayanan
    posted to knock-out protocol recombination recombineering repeat technology by sebastien_vigneau on 2008-06-24 15:56:30 as ***
  • Chromosome-specific DNA repeat probes.
    The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, Vol. 54, No. 12. (December 2006), pp. 1363-1370.
    by A Baumgartner, JF Weier, HU Weier
    posted to alpha-satellite fish probe repeat by sebastien_vigneau on 2008-04-24 21:54:08 as read
  • Evolution of beta satellite DNA sequences: evidence for duplication-mediated repeat amplification and spreading.
    Molecular biology and evolution, Vol. 21, No. 9. (September 2004), pp. 1792-1799.
    by MF Cardone, L Ballarati, M Ventura, M Rocchi, A Marozzi, E Ginelli, R Meneveri
    posted to beta-satellite centromere evolution repeat by sebastien_vigneau on 2008-04-24 22:03:30 as ***
  • Repeat-associated siRNAs cause chromatin silencing of retrotransposons in the Drosophila melanogaster germline.
    Nucleic Acids Res (15 August 2007)
    by Mikhail S S Klenov, Sergey A A Lavrov, Anastasia D D Stolyarenko, Sergey S S Ryazansky, Alexei A A Aravin, Thomas Tuschl, Vladimir A A Gvozdev
    posted to drosophila piwi rasirna repeat sirna by sebastien_vigneau on 2007-08-21 19:57:31 as ** along with 1 person epigenetics
  • Molecular Landscape of Modified Histones in Drosophila Heterochromatic Genes and Euchromatin-Heterochromatin Transition Zones.
    PLoS Genet, Vol. 4, No. 1. (18 January 2008)
    by Jiro C C Yasuhara, Barbara T T Wakimoto
    posted to h3k9me2 heterochromatin repeat retrotransposon translocation by sebastien_vigneau on 2008-01-27 15:12:43 as **** along with 2 people timflutre meiklej
  • The DXPas34 repeat regulates random and imprinted X inactivation.
    Developmental cell, Vol. 12, No. 1. (January 2007), pp. 57-71.
    by DE Cohen, LS Davidow, JA Erwin, N Xu, D Warshawsky, JT Lee
    posted to ctcf dxpas34 inactivation minisatellite repeat x-chromosome by sebastien_vigneau on 2008-05-21 15:30:39 as read
  • Immune dominance of Trypanosoma cruzi tandem repeat proteins.
    Infection and immunity (14 July 2008)
    by Yasuyuki Goto, Darrick Carter, Steven G G Reed
    posted to antigens cruzi repeat tandem trypanosoma by santiago on 2008-08-19 19:59:20 as read
  • Role of the Dnmt3 family in de novo methylation of imprinted and repetitive sequences during male germ cell development in the mouse.
    Hum Mol Genet, Vol. 16, No. 19. (1 October 2007), pp. 2272-2280.
    by Y Kato, M Kaneda, K Hata, K Kumaki, M Hisano, Y Kohara, M Okano, E Li, M Nozaki, H Sasaki
    posted to cell dnmt3a dnmt3b dnmt3l epigenetics germ iap imprinting line male methylation paternal repeat satellite sine sperm by rschulz on 2007-12-03 14:48:31 as read
  • Tandem repeats in the CpG islands of imprinted genes.
    Genomics, Vol. 88, No. 3. (September 2006), pp. 323-332.
    by B Hutter, V Helms, M Paulsen
    posted to cgi comparative dmr epigenetics evolution genomics human imprinting mouse repeat tandem by rschulz on 2007-12-10 12:04:54 as ** along with 1 person clearbluespring
  • Genome-wide tracking of unmethylated DNA Alu repeats in normal and cancer cells.
    Nucleic Acids Res (15 December 2007)
    by Jairo Rodriguez, Laura Vives, Mireia Jordà, Cristina Morales, Mar Muñoz, Elisenda Vendrell, Miguel A A Peinado
    posted to alu cancer dna human methylation repeat retrotransposition retrotransposon survey by rschulz on 2007-12-19 08:19:43 as ** along with 2 people renatomilani FMoncini
  • Comparative analyses of human single- and multilocus tandem repeats.
    Genetics, Vol. 179, No. 3. (July 2008), pp. 1693-1704.
    by D Ames, N Murphy, T Helentjaris, N Sun, V Chandler
    posted to tandem repeat imprinting by rschulz on 2008-09-22 10:17:21 as **
  • Size and number of tandem repeat arrays can determine somatic homologous pairing of transgene loci mediated by epigenetic modifications in Arabidopsis thaliana nuclei.
    Chromosoma, Vol. 117, No. 3. (June 2008), pp. 267-276.
    by G Jovtchev, K Watanabe, A Pecinka, FM Rosin, MF Mette, E Lam, I Schubert
    posted to tandem repeat pairing dna-methylation cpg chromosome by rschulz on 2008-09-30 09:45:58 as **
  • Imprinting mechanisms.
    Genome Res, Vol. 8, No. 9. (September 1998), pp. 881-900.
    by M Constância, B Pickard, G Kelsey, W Reik
    posted to epigenetics feature imprinting mechanism repeat sequence tandem transgene by rschulz on 2007-12-10 11:59:28 as **
  • Characteristics of imprinted genes.
    Nat Genet, Vol. 9, No. 1. (January 1995), pp. 12-13.
    by B Neumann, P Kubicka, DP Barlow
    posted to epigenetics feature imprinting methylation repeat sequence by rschulz on 2007-12-10 12:27:40 as ** along with 1 person clearbluespring
  • Genes with internal repeats require the THO complex for transcription.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 39. (26 September 2006), pp. 14423-14428.
    by V Voynov, KJ Verstrepen, A Jansen, VM Runner, S Buratowski, GR Fink
    posted to repeat tandem tho transcription by rschulz on 2008-06-26 09:42:01 as **
  • Replication slippage versus point mutation rates in short tandem repeats of the human genome.
    Mol Genet Genomics, Vol. 279, No. 1. (January 2008), pp. 53-61.
    by D Pumpernik, B Oblak, B Borstnik
    posted to repeat tandem variation by RichardDurbin on 2008-03-11 14:46:39 as **
  • The genome-wide determinants of human and chimpanzee microsatellite evolution.
    Genome Res (21 November 2007)
    by Yogeshwar D D Kelkar, Svitlana Tyekucheva, Francesca Chiaromonte, Kateryna D D Makova
    posted to repeat tandem variation by RichardDurbin on 2008-03-11 14:45:36 as ** along with 3 people balicea djkt ryanraaum
  • notes De novo repeat classification and fragment assembly.
    Genome Res, Vol. 14, No. 9. (September 2004), pp. 1786-1796.
    by PA Pevzner, H Tang, G Tesler
    posted to masking repeat tool by prajlondhe on 2007-05-23 19:45:15 as **** along with 11 people brl briann operon timflutre azazello nedwards urgi yoanjacquemin dmc Ema Neeperando
  • Automated de novo identification of repeat sequence families in sequenced genomes.
    Genome Res, Vol. 12, No. 8. (August 2002), pp. 1269-1276.
    by Z Bao, SR Eddy
    posted to assembly repeat by Neeperando on 2008-05-29 14:49:09 as ** along with 5 people aprasad timflutre Jporci urgi yoanjacquemin
  • The biological effects of simple tandem repeats: Lessons from the repeat expansion diseases
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1011-1019.
    by Karen Usdin
    posted to repeat by Neeperando on 2008-07-01 19:56:25 as ** along with 2 people balicea dchughes
  • Mammalian microRNAs derived from genomic repeats.
    Trends Genet, Vol. 21, No. 6. (June 2005), pp. 322-326.
    by NR Smalheiser, VI Torvik
    posted to microrna ncrna rasirna repeat by mtagaya on 2006-07-11 05:57:18 as ** along with 7 people and 3 groups ushishir andersbj dchughes scroft chenlc03 jackjackjjj N0131826 microRNA G4ID Genetics-of-Gambling
  • Ribonuclease Dicer Cleaves Triplet Repeat Hairpins into Shorter Repeats that Silence Specific Targets.
    Mol Cell, Vol. 25, No. 4. (23 February 2007), pp. 575-586.
    by J Krol, A Fiszer, A Mykowska, K Sobczak, M de Mezer, WJ Krzyzosiak
    posted to microrna repeat by mtagaya on 2007-02-26 10:07:54 as ** along with 2 people and 1 group tardigrade andersbj microRNA
  • Tandem repeats over the edit distance.
    Bioinformatics, Vol. 23, No. 2. (15 January 2007)
    by D Sokol, G Benson, J Tojeira
    posted to bioinformatics repeat by mtagaya on 2007-03-23 08:24:24 as ** along with 1 person operon
  • OMWSA: detection of DNA repeats using moving window spectral analysis.
    Bioinformatics (31 January 2007)
    by Liping Du, Hongxia Zhou, Hong Yan
    posted to bioinformatics repeat by mtagaya on 2007-03-22 04:59:46 as **
  • AT-rich repeats associated with chromosome 22q11.2 rearrangement disorders shape human genome architecture on Yq12.
    Genome Res (6 February 2007)
    by Melanie Babcock, Svetlana Yatsenko, Pawel Stankiewicz, James R R Lupski, Bernice E E Morrow
    posted to disorder repeat by mtagaya on 2007-02-27 07:56:25 as **
  • Identifying repeat domains in large genomes.
    Genome Biol, Vol. 7, No. 1. (2006)
    by D Zhi, BJ Raphael, AL Price, H Tang, PA Pevzner
    posted to c_elegans genome repeat by mtagaya on 2007-03-01 10:29:20 as **
  • Analysis of homologous gene clusters in Caenorhabditis elegans reveals striking regional cluster domains.
    Genetics, Vol. 172, No. 1. (January 2006), pp. 127-143.
    by JH Thomas
    posted to c_elegans cluster genome repeat by mtagaya on 2007-03-01 10:29:58 as **
  • How repetitive are genomes?
    BMC Bioinformatics, Vol. 7 (22 December 2006), 541.
    by Bernhard Haubold, Thomas Wiehe
    posted to repeat genome by mtagaya on 2007-02-05 01:54:17 as **
  • siRNAs and DNA Methylation Do a Two-Step to Silence Tandem Sequences
    PLoS Biology, Vol. 4, No. 11. (1 November 2006)
    by Richard Robinson
    posted to methylation repeat sirna by mtagaya on 2006-11-17 01:18:10 as **
  • RNA polymerase III transcribes human microRNAs.
    Nat Struct Mol Biol (12 November 2006)
    by Glen M M Borchert, William Lanier, Beverly L L Davidson
    posted to alu microrna ncrna polymerase repeat transcription by mtagaya on 2006-11-15 00:51:44 as read along with 3 people and 1 group tardigrade andersbj N0131826 microRNA
  • Alu elements within human mRNAs are probable microRNA targets
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Neil R Smalheiser, Vetle I Torvik
    posted to microrna ncrna repeat by mtagaya on 2006-10-26 10:29:35 as read along with 7 people and 4 groups tardigrade andersbj dchughes ealloza jackjackjjj N0131826 jayster4 microRNA G4ID BioinfoCIPF Genetics-of-Gambling
  • Human ribosomal RNA gene arrays display a broad range of palindromic structures.
    Genome Res, Vol. 15, No. 8. (August 2005), pp. 1079-1085.
    by S Caburet, C Conti, C Schurra, R Lebofsky, SJ Edelstein, A Bensimon
    posted to cluster ncrna repeat rrna by mtagaya on 2006-06-15 11:44:12 as **
  • Two-Step Recruitment of RNA-Directed DNA Methylation to Tandem Repeats.
    PLoS Biol, Vol. 4, No. 11. (24 October 2006)
    by Simon W-L W Chan, Xiaoyu Zhang, Yana V V Bernatavichute, Steven E E Jacobsen
    posted to methylation repeat sirna by mtagaya on 2006-11-17 01:17:03 as ** along with 1 person braingrind
  • Human rDNA: evolutionary patterns within the genes and tandem arrays derived from multiple chromosomes.
    Genomics, Vol. 73, No. 3. (1 May 2001), pp. 255-263.
    by IL Gonzalez, JE Sylvester
    posted to ncrna repeat rrna by mtagaya on 2006-06-15 11:40:26 as **
  • Complete sequence of the 43-kb human ribosomal DNA repeat: analysis of the intergenic spacer.
    Genomics, Vol. 27, No. 2. (20 May 1995), pp. 320-328.
    by IL Gonzalez, JE Sylvester
    posted to genome ncrna repeat rrna by mtagaya on 2006-06-15 11:35:44 as **
  • Origin and evolution of human microRNAs from transposable elements.
    Genetics (15 April 2007)
    by Jittima Piriyapongsa, Leonardo Mariño-Ramírez, I King K Jordan
    posted to microrna repeat by mtagaya on 2007-04-24 05:02:18 as ** along with 6 people and 5 groups gpappas tardigrade andersbj dchughes cisevol emptyhb microRNA G4ID Genetics-of-Gambling cis-regulatory-evolution BergmanLab
  • A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements.
    PLoS ONE, Vol. 2 (2007)
    by J Piriyapongsa, IK Jordan
    posted to mirna ncrna repeat by mtagaya on 2007-02-20 06:28:34 as ** along with 1 person and 1 group andersbj microRNA
  • NEAT: a domain duplicated in genes near the components of a putative Fe3+ siderophore transporter from Gram-positive pathogenic bacteria.
    Genome Biol, Vol. 3, No. 9. (15 August 2002)
    by MA Andrade, FD Ciccarelli, C Perez-Iratxeta, P Bork
    posted to analysis repeat sequence by miguel on 2005-09-12 20:41:28 as read
  • The association of CAG repeat length with clinical progression in Huntington disease.
    Neurology, Vol. 66, No. 7. (11 April 2006), pp. 1016-1020.
    by A Rosenblatt, KY Liang, H Zhou, MH Abbott, LM Gourley, RL Margolis, J Brandt, CA Ross
    posted to repeat length huntington cag by mgaldzic on 2007-01-31 20:57:27 as ** along with 1 group CHIP
  • A novel trinucleotide repeat expansion at chromosome 3q26.2 identified by a CAG/CTG repeat expansion detection array
    Human Genetics, Vol. 120, No. 2. (September 2006), pp. 193-200.
    by Holmes, , Wentzell, , Seixas, , Callahan, , Silveira, , Ross, , Margolis,
    posted to trinucleotide repeat expansion detection ctg cag array 3q262 by mgaldzic on 2007-01-31 21:00:31 as ** along with 1 group CHIP
  • Efficient Short Video Repeat Identification With Application to News Video Structure Analysis
    IEEE Transactions on Multimedia, Vol. 9, No. 3. (April 2007), pp. 600-609.
    by Xian-Feng Yang, Qi Tian, Ping Xue
    posted to analysis artificial cascade clip coding color data detection discovery extraction feature fingerprint identification image indexing intelligence knowledge learning mining news performance reinforcement repeat repeats segmentation short structure syntactical video by masaakif on 2008-02-20 05:00:17 as **
  • Signal Processing Methods for Music Transcription
    (09 May 2006)
    posted to repeat easyread by Malc on 2008-09-10 09:30:51 as ** along with 3 people ppeeling eddymier beete
  • The DMWD protein from the myotonic dystrophy (DM1) gene region is developmentally regulated and is present most prominently in synapse-dense brain areas.
    Brain Res, Vol. 971, No. 1. (2 May 2003), pp. 116-127.
    by JH Westerlaken, CE Van der Zee, W Peters, B Wieringa
    posted to 03 brain dm1 dmwd gene_ repeat synapse testis by klo on 2008-07-29 13:40:19 as ** along with 2 people and 2 groups dchughes praj22 G4ID Genetics-of-Gambling
  • hATpin, a Family of MITE-like hAT Mobile Elements Conserved in Diverse Plant Species that Forms Highly Stable Secondary Structures.
    Plant Mol Biol, Vol. 58, No. 6. (August 2005), pp. 869-886.
    by S Moreno-Vázquez, J Ning, BC Meyers
    posted to plant repeat by jwortman on 2005-11-21 00:39:23 as ***
  • Tandem repeats over the edit distance
    Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. e30-e35.
    by Sokol, Dina, Benson, Gary, Tojeira, Justin
    posted to repeat tandem by joavah on 2008-01-30 19:19:17 as **
  • Genetic Absolute Dating Based on Microsatellites and the Origin of Modern Humans
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 92, No. 15. (1995), pp. 6723-6727.
    by DB Goldstein, Ruiz A Linares, LL Cavalli-Sforza, MW Feldman
    posted to human loci model mutation origins out-of-africa phylogeny repeat stepwise tandem theory by JMCpaniscus on 2008-04-01 11:16:38 as **
  • Detection of APC gene deletion by double competitive polymerase chain reaction in patients with familial adenomatous polyposis.
    Int J Oncol, Vol. 29, No. 2. (August 2006), pp. 413-421.
    by M Takahashi, M Kikuchi, N Ohkura, H Yaguchi, Y Nagamura, S Ohnami, M Ushiama, T Yoshida, K Sugano, T Iwama, S Kosugi, T Tsukada
    posted to carcinogenesis deletion repeat by jlangdon on 2008-01-18 14:08:38 as **
  • Amplification and overexpression of genes in 17p11.2 ~ p12 in osteosarcoma.
    Cancer Genet Cytogenet, Vol. 153, No. 1. (August 2004), pp. 77-80.
    by M van Dartel, TJ Hulsebos
    posted to 17p112 carcinogenesis recombination repeat by jlangdon on 2008-01-18 14:28:55 as **
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