Cell, Vol. 122, No. 4. (26 August 2005), pp. 517-527.
by DK
Pokholok, CT
Harbison, S
Levine, M
Cole, NM
Hannett, TI
Lee, GW
Bell, K
Walker, PA
Rolfe, E
Herbolsheimer, J
Zeitlinger, F
Lewitter, DK
Gifford, RA
Young
Cell, Vol. 125, No. 2. (21 April 2006), pp. 315-326.
by BE
Bernstein, TS
Mikkelsen, X
Xie, M
Kamal, DJ
Huebert, J
Cuff, B
Fry, A
Meissner, M
Wernig, K
Plath, R
Jaenisch, A
Wagschal, R
Feil, SL
Schreiber, ES
Lander
Nature Genetics, Vol. 38, No. 6., pp. 608-609.
Cell, Vol. 124, No. 1. (13 January 2006), pp. 47-59.
Genome Res, Vol. 15, No. 2. (February 2005), pp. 330-340.
Nat Genet (4 February 2007)
by Nathaniel D D
Heintzman, Rhona K K
Stuart, Gary
Hon, Yutao
Fu, Christina W W
Ching, R David D
Hawkins, Leah O O
Barrera, Sara
Van Calcar, Chunxu
Qu, Keith A A
Ching, Wei
Wang, Zhiping
Weng, Roland D D
Green, Gregory E E
Crawford, Bing
Ren
Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15776-15781.
by T
Shiraki, S
Kondo, S
Katayama, K
Waki, T
Kasukawa, H
Kawaji, R
Kodzius, A
Watahiki, M
Nakamura, T
Arakawa, S
Fukuda, D
Sasaki, A
Podhajska, M
Harbers, J
Kawai, P
Carninci, Y
Hayashizaki
Nat Cell Biol, Vol. 6, No. 1. (January 2004), pp. 73-77.
posted to
tez by
olympos
on 2007-11-11 18:36:31
as
Curr Opin Genet Dev, Vol. 11, No. 2. (April 2001), pp. 155-161.
Genome Res (24 May 2007)
Journal of Computational and Graphical Statistics, Vol. 5, No. 3. (1996), pp. 299-314.
Nature (29 June 2005)
Proceedings of the National Academy of Sciences, Vol. 99, No. 13. (25 June 2002), pp. 8695-8700.
posted to
tez by
olympos
on 2007-11-11 18:34:39
as
Nat Genet, Vol. 36, No. 8. (August 2004), pp. 900-905.
Genome Res., Vol. 16, No. 9. (1 September 2006), pp. 1126-1135.
Journal of Molecular Biology, Vol. 349, No. 1. (27 May 2005), pp. 27-45.
Genome Res, Vol. 17, No. 6. (June 2007), pp. 839-851.
by D
Zheng, A
Frankish, R
Baertsch, P
Kapranov, A
Reymond, SW
Choo, Y
Lu, F
Denoeud, SE
Antonarakis, M
Snyder, Y
Ruan, CL
Wei, TR
Gingeras, R
Guigó, J
Harrow, MB
Gerstein
Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
by RM
Kuhn, D
Karolchik, AS
Zweig, H
Trumbower, DJ
Thomas, A
Thakkapallayil, CW
Sugnet, M
Stanke, KE
Smith, A
Siepel, KR
Rosenbloom, B
Rhead, BJ
Raney, A
Pohl, JS
Pedersen, F
Hsu, AS
Hinrichs, RA
Harte, M
Diekhans, H
Clawson, G
Bejerano, GP
Barber, R
Baertsch, D
Haussler, WJ
Kent
Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816.
Cell, Vol. 128, No. 4. (23 February 2007), pp. 707-719.
Trends Biotechnol, Vol. 22, No. 1. (January 2004), pp. 23-30.
Genome Res, Vol. 15, No. 8. (August 2005), pp. 1034-1050.
by A
Siepel, G
Bejerano, JS
Pedersen, AS
Hinrichs, M
Hou, K
Rosenbloom, H
Clawson, J
Spieth, LW
Hillier, S
Richards, GM
Weinstock, RK
Wilson, RA
Gibbs, WJ
Kent, W
Miller, D
Haussler
Gene, Vol. 240, No. 1. (15 November 1999), pp. 1-12.
posted to
tez by
olympos
on 2007-11-10 17:21:29
as
Trends in Genetics, Vol. 19, No. 2. (February 2003), pp. 68-72.
Science, Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351.
by JC
Venter, MD
Adams, EW
Myers, PW
Li, RJ
Mural, GG
Sutton, HO
Smith, M
Yandell, CA
Evans, RA
Holt, JD
Gocayne, P
Amanatides, RM
Ballew, DH
Huson, JR
Wortman, Q
Zhang, CD
Kodira, XH
Zheng, L
Chen, M
Skupski, G
Subramanian, PD
Thomas, J
Zhang, Gabor GL
Miklos, C
Nelson, S
Broder, AG
Clark, J
Nadeau, VA
Mckusick, N
Zinder, AJ
Levine, RJ
Roberts, M
Simon, C
Slayman, M
Hunkapiller, R
Bolanos, A
Delcher, I
Dew, D
Fasulo, M
Flanigan, L
Florea, A
Halpern, S
Hannenhalli, S
Kravitz, S
Levy, C
Mobarry, K
Reinert, K
Remington, J
Abu-Threideh, E
Beasley, K
Biddick, V
Bonazzi, R
Brandon, M
Cargill, I
Chandramouliswaran, R
Charlab, K
Chaturvedi, Z
Deng, V
Di Francesco, P
Dunn, K
Eilbeck, C
Evangelista, AE
Gabrielian, W
Gan, W
Ge, F
Gong, Z
Gu, P
Guan, TJ
Heiman, ME
Higgins, RR
Ji, Z
Ke, KA
Ketchum, Z
Lai, Y
Lei, Z
Li, J
Li, Y
Liang, X
Lin, F
Lu, GV
Merkulov, N
Milshina, HM
Moore, AK
Naik, VA
Narayan, B
Neelam, D
Nusskern, DB
Rusch, S
Salzberg, W
Shao, B
Shue, J
Sun, Z
Wang, A
Wang, X
Wang, J
Wang, M
Wei, R
Wides, C
Xiao, C
Yan, A
Yao, J
Ye, M
Zhan, W
Zhang, H
Zhang, Q
Zhao, L
Zheng, F
Zhong, W
Zhong, S
Zhu, S
Zhao, D
Gilbert, S
Baumhueter, G
Spier, C
Carter, A
Cravchik, T
Woodage, F
Ali, H
An, A
Awe, D
Baldwin, H
Baden, M
Barnstead, I
Barrow, K
Beeson, D
Busam, A
Carver, A
Center, ML
Cheng, L
Curry, S
Danaher, L
Davenport, R
Desilets, S
Dietz, K
Dodson, L
Doup, S
Ferriera, N
Garg, A
Gluecksmann, B
Hart, J
Haynes, C
Haynes, C
Heiner, S
Hladun, D
Hostin, J
Houck, T
Howland, C
Ibegwam, J
Johnson, F
Kalush, L
Kline, S
Koduru, A
Love, F
Mann, D
May, S
Mccawley, T
Mcintosh, I
Mcmullen, M
Moy, L
Moy, B
Murphy, K
Nelson, C
Pfannkoch, E
Pratts, V
Puri, H
Qureshi, M
Reardon, R
Rodriguez, YH
Rogers, D
Romblad, B
Ruhfel, R
Scott, C
Sitter, M
Smallwood, E
Stewart, R
Strong, E
Suh, R
Thomas, NN
Tint, S
Tse, C
Vech, G
Wang, J
Wetter, S
Williams, M
Williams, S
Windsor, E
Winn-Deen, K
Wolfe, J
Zaveri, K
Zaveri, JF
Abril, R
Guigó, MJ
Campbell, KV
Sjolander, B
Karlak, A
Kejariwal, H
Mi, B
Lazareva, T
Hatton, A
Narechania, K
Diemer, A
Muruganujan, N
Guo, S
Sato, V
Bafna, S
Istrail, R
Lippert, R
Schwartz, B
Walenz, S
Yooseph, D
Allen, A
Basu, J
Baxendale, L
Blick, M
Caminha, J
Carnes-Stine, P
Caulk, YH
Chiang, M
Coyne, C
Dahlke, A
Mays, M
Dombroski, M
Donnelly, D
Ely, S
Esparham, C
Fosler, H
Gire, S
Glanowski, K
Glasser, A
Glodek, M
Gorokhov, K
Graham, B
Gropman, M
Harris, J
Heil, S
Henderson, J
Hoover, D
Jennings, C
Jordan, J
Jordan, J
Kasha, L
Kagan, C
Kraft, A
Levitsky, M
Lewis, X
Liu, J
Lopez, D
Ma, W
Majoros, J
Mcdaniel, S
Murphy, M
Newman, T
Nguyen, N
Nguyen, M
Nodell, S
Pan, J
Peck, M
Peterson, W
Rowe, R
Sanders, J
Scott, M
Simpson, T
Smith, A
Sprague, T
Stockwell, R
Turner, E
Venter, M
Wang, M
Wen, D
Wu, M
Wu, A
Xia, A
Zandieh, X
Zhu
Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 720-731.
by Nathan D
Trinklein, Ulas
Karaoz, Jiaqian
Wu, Anason
Halees,
Force, Patrick J
Collins, Deyou
Zheng, Zhengdong D
Zhang, Mark B
Gerstein, Michael
Snyder, Richard M
Myers, Zhiping
Weng
Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
Proc Natl Acad Sci U S A, Vol. 101, No. 32. (10 August 2004), pp. 11701-11706.
Science, Vol. 284, No. 5423. (25 June 1999), pp. 2174-2177.
Nature, Vol. 419, No. 6905. (2002), pp. 407-411.
posted to
tez by
olympos
on 2007-11-11 18:35:14
as
Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 691-707.
by Christoph M
Koch, Robert M
Andrews, Paul
Flicek, Shane C
Dillon, Ulas
Karaoz, Gayle K
Clelland, Sarah
Wilcox, David M
Beare, Joanna C
Fowler, Phillippe
Couttet, Keith D
James, Gregory C
Lefebvre, Alexander W
Bruce, Oliver M
Dovey, Peter D
Ellis, Pawandeep
Dhami, Cordelia F
Langford, Zhiping
Weng, Ewan
Birney, Nigel P
Carter, David
Vetrie, Ian
Dunham
Nature Methods, Vol. 3, No. 7. (21 June 2006), pp. 511-518.
by Peter J
Sabo, Michael S
Kuehn, Robert
Thurman, Brett E
Johnson, Ericka M
Johnson, Hua
Cao, Man
Yu, Elizabeth
Rosenzweig, Jeff
Goldy, Andrew
Haydock, Molly
Weaver, Anthony
Shafer, Kristin
Lee, Fidencio
Neri, Richard
Humbert, Michael A
Singer, Todd A
Richmond, Michael O
Dorschner, Michael
Mcarthur, Michael
Hawrylycz, Roland D
Green, Patrick A
Navas, William S
Noble, John A
Stamatoyannopoulos
Gene, Vol. 240, No. 1. (15 November 1999), pp. 1-12.
Journal of Molecular Biology, Vol. 236, No. 4. (4 March 1994), pp. 1067-1078.
posted to
tez by
olympos
on 2007-11-05 17:35:45
as
Methods Enzymol, Vol. 376 (2004), pp. 289-304.
Genome Biology, Vol. 7, No. Suppl 1. (2006)
by Jennifer
Harrow, France
Denoeud, Adam
Frankish, Alexandre
Reymond, Chao K
Chen, Jacqueline
Chrast, Julien
Lagarde, James
Gilbert, Roy
Storey, David
Swarbreck, Colette
Rossier, Catherine
Ucla, Tim
Hubbard, Stylianos
Antonarakis, Roderic
Guigo
Molecular Cell, Vol. 11, No. 3. (March 2003), pp. 709-719.
posted to
tez by
olympos
on 2007-11-11 18:35:57
as
Science, Vol. 309, No. 5740. (02 September 2005), pp. 1529-1530.
Nucleic Acids Res, Vol. 34, No. 20. (2006), pp. 5943-5950.
Genome Res (31 January 2007)
Cell, Vol. 65, No. 6. (14 June 1991), pp. 1023-1031.
posted to
tez by
olympos
on 2007-11-10 21:14:07
as
Science, Vol. 298, No. 5595. (1 November 2002), pp. 1039-1043.
Current Opinion in Genetics & Development, Vol. 12, No. 2. (1 April 2002), pp. 198-209.
Annu Rev Genet, Vol. 37 (2003), pp. 123-151.
Science, Vol. 293, No. 5532. (10 August 2001), pp. 1074-1080.
PLoS Genet, Vol. 2, No. 4. (April 2006)
Genome Res (19 December 2006)
Biochemistry, Vol. 3 (January 1964), pp. 10-15.
posted to
tez by
olympos
on 2007-11-10 21:50:43
as
Genome Biology, Vol. 8 (26 March 2007), R42.
Genome Res (12 June 2006)