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Auger library [42 articles]

Статьи, недавно добавленные в библиотеку Auger .
  • The neighbor-joining method: a new method for reconstructing phylogenetic trees.
    Mol Biol Evol, Vol. 4, No. 4. (July 1987), pp. 406-425.
    by N Saitou, M Nei
    posted to nj by Auger on 2008-05-14 13:24:05 as ** along with 7 people and 1 group bandrewfox greger_halltorp taka gelack BioNica usagi-kirin ArtemPankin Dead 60's
  • Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae.
    J Mol Biol, Vol. 296, No. 5. (10 March 2000), pp. 1205-1214.
    by JD Hughes, PW Estep, S Tavazoie, GM Church
    posted to search regulatory elements cis bioinformatics by Auger on 2008-05-05 14:28:43 as ** along with 4 people and 2 groups kaspermunch dquest maximilianh dandaman Dead 60's Bioinformatics
  • The DNA-binding specificity of the hepatocyte nuclear factor 3/forkhead domain is influenced by amino-acid residues adjacent to the recognition helix.
    Molecular and cellular biology, Vol. 14, No. 4. (April 1994), pp. 2755-2766.
    by DG Overdier, A Porcella, RH Costa
    posted to foxa consensus by Auger on 2008-05-05 14:16:16 as ** along with 1 group Dead 60's
  • Regulation of Organogenesis by the Caenorhabditis elegans FoxA Protein PHA-4
    Science, Vol. 295, No. 5556. (1 February 2002), pp. 821-825.
    by J Gaudet, SE Mango
    posted to tgttt foxa elegans c by Auger on 2008-05-05 14:08:29 as ** along with 4 people and 3 groups ana tardigrade postrational maximilianh Dead 60's structural_bioinformatics Bioinformatics
  • A web-based interactive developmental table for the ascidian Ciona intestinalis, including 3D real-image embryo reconstructions: I. From fertilized egg to hatching larva.
    Developmental dynamics : an official publication of the American Association of Anatomists, Vol. 236, No. 7. (July 2007), pp. 1790-1805.
    by K Hotta, K Mitsuhara, H Takahashi, K Inaba, K Oka, T Gojobori, K Ikeo
    posted to development ci 3d by Auger on 2008-05-05 13:51:15 as ** along with 1 group Dead 60's
  • Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme. II. The 16- and 32-cell stages.
    Developmental biology, Vol. 110, No. 2. (August 1985), pp. 440-454.
    by H Nishida, N Satoh
    posted to stages lineage cell 32-64-cell by Auger on 2008-05-05 13:49:43 as ** along with 1 group Dead 60's
  • Chromosome rearrangements in evolution: From gene order to genome sequence and back.
    Proc Natl Acad Sci U S A, Vol. 100, No. 20. (30 September 2003), pp. 11188-11189.
    by D Sankoff, JH Nadeau
    posted to bioinformatics by Auger on 2008-05-05 13:46:15 as ** along with 2 people and 1 group operon maximilianh Dead 60's
  • TRANSFAC: transcriptional regulation, from patterns to profiles.
    Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 374-378.
    by V Matys, E Fricke, R Geffers, E Gössling, M Haubrock, R Hehl, K Hornischer, D Karas, AE Kel, OV Kel-Margoulis, DU Kloos, S Land, B Lewicki-Potapov, H Michael, R Münch, I Reuter, S Rotert, H Saxel, M Scheer, S Thiele, E Wingender
    posted to transfac by Auger on 2008-05-05 13:42:47 as ** along with 5 people and 1 group aalibes setar chad_davis GustavoLacerda marti Dead 60's
  • A multicassette Gateway vector set for high throughput and comparative analyses in ciona and vertebrate embryos.
    PLoS ONE, Vol. 2, No. 9. (2007)
    by A Roure, U Rothbächer, F Robin, E Kalmar, G Ferone, C Lamy, C Missero, F Mueller, P Lemaire
    posted to technique gateway cloning by Auger on 2008-05-05 13:38:28 as ** along with 2 people and 1 group FJ maximilianh Dead 60's
  • I-SceI meganuclease mediates highly efficient transgenesis in fish.
    Mechanisms of development, Vol. 118, No. 1-2. (October 2002), pp. 91-98.
    by V Thermes, C Grabher, F Ristoratore, F Bourrat, A Choulika, J Wittbrodt, JS Joly
    posted to medaka i-scei by Auger on 2008-05-05 13:37:39 as ** along with 1 person and 1 group jsjoly Dead 60's
  • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood.
    Syst Biol, Vol. 52, No. 5. (October 2003), pp. 696-704.
    by S Guindon, O Gascuel
    posted to using trees phyml phylogeny by Auger on 2008-05-05 13:36:10 as ** along with 7 people and 1 group bpb chrn aprasad lyongu treangen Haggan cdallett Dead 60's
  • MUST, a computer package of Management Utilities for Sequences and Trees.
    Nucleic acids research, Vol. 21, No. 22. (11 November 1993), pp. 5264-5272.
    by H Philippe
    posted to phylogeny must by Auger on 2008-05-05 13:35:00 as ** along with 1 group Dead 60's
  • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools.
    Nucleic Acids Res, Vol. 25, No. 24. (15 December 1997), pp. 4876-4882.
    by JD Thompson, TJ Gibson, F Plewniak, F Jeanmougin, DG Higgins
    posted to clustal-x by Auger on 2008-05-05 13:34:03 as ** along with 4 people and 3 groups jwm gelack manzanita carpi Dead 60's Radiation_Damage Stressosome
  • VISTA: computational tools for comparative genomics.
    Nucleic acids research, Vol. 32, No. Web Server issue. (1 July 2004)
    by KA Frazer, L Pachter, A Poliakov, EM Rubin, I Dubchak
    posted to vista by Auger on 2008-05-05 13:32:02 as ** along with 1 person and 1 group natstreet Dead 60's
  • Characterization of a notochord-specific enhancer from the Brachyury promoter region of the ascidian, Ciona intestinalis.
    Development (Cambridge, England), Vol. 124, No. 3. (February 1997), pp. 589-602.
    by JC Corbo, M Levine, RW Zeller
    posted to pbra electroporation ci by Auger on 2008-05-05 13:24:26 as ** along with 1 group Dead 60's
  • Neural tissue in ascidian embryos is induced by FGF9/16/20, acting via a combination of maternal GATA and Ets transcription factors.
    Cell, Vol. 115, No. 5. (26 November 2003), pp. 615-627.
    by V Bertrand, C Hudson, D Caillol, C Popovici, P Lemaire
    posted to gata fgf91620 ci by Auger on 2008-05-05 13:23:29 as ** along with 1 person and 2 groups nickluscombe Dead 60's EBI-regulation
  • An automated in situ hybridization screen in the Medaka to identify unknown neural genes.
    Developmental dynamics : an official publication of the American Association of Anatomists, Vol. 234, No. 3. (November 2005), pp. 698-708.
    by C Deyts, E Candal, JS Joly, F Bourrat
    posted to robot his by Auger on 2008-05-05 13:22:12 as ** along with 1 person and 1 group deves Dead 60's
  • A cDNA resource from the basal chordate Ciona intestinalis.
    Genesis (New York, N.Y. : 2000), Vol. 33, No. 4. (August 2002), pp. 153-154.
    by Y Satou, L Yamada, Y Mochizuki, N Takatori, T Kawashima, A Sasaki, M Hamaguchi, S Awazu, K Yagi, Y Sasakura, A Nakayama, H Ishikawa, K Inaba, N Satoh
    posted to ci cdna bank by Auger on 2008-05-05 13:20:05 as ** along with 1 group Dead 60's
  • The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.
    Science, Vol. 298, No. 5601. (13 December 2002), pp. 2157-2167.
    by P Dehal, Y Satou, RK Campbell, J Chapman, B Degnan, A De Tomaso, B Davidson, A Di Gregorio, M Gelpke, DM Goodstein, N Harafuji, KE Hastings, I Ho, K Hotta, W Huang, T Kawashima, P Lemaire, D Martinez, IA Meinertzhagen, S Necula, M Nonaka, N Putnam, S Rash, H Saiga, M Satake, A Terry, L Yamada, HG Wang, S Awazu, K Azumi, J Boore, M Branno, S Chin-Bow, R DeSantis, S Doyle, P Francino, DN Keys, S Haga, H Hayashi, K Hino, KS Imai, K Inaba, S Kano, K Kobayashi, M Kobayashi, BI Lee, KW Makabe, C Manohar, G Matassi, M Medina, Y Mochizuki, S Mount, T Morishita, S Miura, A Nakayama, S Nishizaka, H Nomoto, F Ohta, K Oishi, I Rigoutsos, M Sano, A Sasaki, Y Sasakura, E Shoguchi, T Shin-i, A Spagnuolo, D Stainier, MM Suzuki, O Tassy, N Takatori, M Tokuoka, K Yagi, F Yoshizaki, S Wada, C Zhang, PD Hyatt, F Larimer, C Detter, N Doggett, T Glavina, T Hawkins, P Richardson, S Lucas, Y Kohara, M Levine, N Satoh, DS Rokhsar
    posted to genome draft ci by Auger on 2008-05-05 13:19:16 as ** along with 3 people and 4 groups dchughes nickluscombe maximilianh Dead 60's G4ID EBI-regulation Genetics-of-Gambling
  • Induced neural-type differentiation in the cleavage-arrested blastomere isolated from early ascidian embryos.
    The Journal of physiology, Vol. 427 (August 1990), pp. 603-623.
    by H Okado, K Takahashi
    posted to ciona by Auger on 2008-05-05 13:16:23 as ** along with 1 group Dead 60's
  • Induction of anterior neural fates in the ascidian Ciona intestinalis.
    Mechanisms of development, Vol. 100, No. 2. (February 2001), pp. 189-203.
    by C Hudson, P Lemaire
    posted to neural fates ci anterior by Auger on 2008-04-28 10:53:48 as ** along with 1 group Dead 60's
  • Ci-FoxA-a is the earliest zygotic determinant of the ascidian anterior ectoderm and directly activates Ci-sFRP1/5.
    Development, Vol. 133, No. 15. (August 2006), pp. 2835-2844.
    by C Lamy, U Rothbächer, D Caillol, P Lemaire
    posted to sfrp15 foxa by Auger on 2008-04-28 10:52:32 as ** along with 1 person and 1 group maximilianh Dead 60's
  • Assembly of polymorphic genomes: algorithms and application to Ciona savignyi.
    Genome Res, Vol. 15, No. 8. (August 2005), pp. 1127-1135.
    by JP Vinson, DB Jaffe, K O'Neill, EK Karlsson, N Stange-Thomann, S Anderson, JP Mesirov, N Satoh, Y Satou, C Nusbaum, B Birren, JE Galagan, ES Lander
    posted to savignyi genome c assembly by Auger on 2008-04-28 10:50:31 as ** along with 3 people and 1 group Neeperando jwortman nhp Dead 60's
  • The regulation of forkhead/HNF-3beta expression in the Ciona embryo.
    Developmental biology, Vol. 229, No. 1. (1 January 2001), pp. 31-43.
    by A Di Gregorio, JC Corbo, M Levine
    posted to technique electroportaion by Auger on 2008-04-28 10:49:20 as ** along with 1 group Dead 60's
  • Tunicates and not cephalochordates are the closest living relatives of vertebrates
    Nature, Vol. 439, No. 7079., pp. 965-968.
    by Frã©dã©ric Delsuc, Henner Brinkmann, Daniel Chourrout, Hervã© Philippe
    posted to tunicates phylogeny by Auger on 2008-04-28 10:46:13 as ** along with 3 people and 1 group aprasad maximilianh cmzmasek Dead 60's
  • The C. elegans ROR receptor tyrosine kinase, CAM-1, non-autonomously inhibits the Wnt pathway
    Development, Vol. 134, No. 22. (15 November 2007), pp. 4053-4062.
    by Jennifer L Green, Takao Inoue, Paul W Sternberg
    posted to wnt inhib cano cam-1 by Auger on 2008-04-28 10:41:21 as ** along with 1 person and 1 group maximilianh Dead 60's
  • Ror2 modulates the canonical Wnt signaling in lung epithelial cells through cooperation with Fzd2
    BMC Molecular Biology, Vol. 9 (23 January 2008), 11.
    by Changgong Li, Hongyan Chen, Lingyan Hu, Yiming Xing, Tomoyo Sasaki, Maria F Villosis, John Li, Michiru Nishita, Yasuhiro Minami, Parviz Minoo
    posted to ror2fz2 by Auger on 2008-04-28 10:39:04 as ** along with 1 person and 1 group maximilianh Dead 60's
  • The orphan receptor tyrosine kinase Ror2 modulates canonical Wnt signaling in osteoblastic cells.
    Molecular endocrinology (Baltimore, Md.), Vol. 19, No. 1. (January 2005), pp. 90-101.
    by J Billiard, DS Way, LM Seestaller-Wehr, RA Moran, A Mangine, PV Bodine
    posted to ror2 osteoblastic cells by Auger on 2008-04-28 10:38:17 as ** along with 1 group Dead 60's
  • Expression and function of the Ror-family receptor tyrosine kinases during development: lessons from genetic analyses of nematodes, mice, and humans.
    J Recept Signal Transduct Res, Vol. 23, No. 1. (February 2003), pp. 1-15.
    by A Yoda, I Oishi, Y Minami
    posted to ror prot family by Auger on 2008-04-28 10:36:36 as ** along with 1 person and 1 group maximilianh Dead 60's
  • The Xenopus receptor tyrosine kinase Xror2 modulates morphogenetic movements of the axial mesoderm and neuroectoderm via Wnt signaling.
    Development (Cambridge, England), Vol. 129, No. 22. (November 2002), pp. 5227-5239.
    by H Hikasa, M Shibata, I Hiratani, M Taira
    posted to xenopus ror2 by Auger on 2008-04-28 10:36:06 as ** along with 1 group Dead 60's
  • The receptor tyrosine kinase Ror2 is involved in non-canonical Wnt5a/JNK signalling pathway.
    Genes to cells : devoted to molecular & cellular mechanisms, Vol. 8, No. 7. (July 2003), pp. 645-654.
    by I Oishi, H Suzuki, N Onishi, R Takada, S Kani, B Ohkawara, I Koshida, K Suzuki, G Yamada, GC Schwabe, S Mundlos, H Shibuya, S Takada, Y Minami
    posted to ror2wnt5a by Auger on 2008-04-28 10:35:36 as ** along with 1 group Dead 60's
  • Expression of the receptor tyrosine kinase genes, Ror1 and Ror2, during mouse development.
    Mechanisms of development, Vol. 105, No. 1-2. (July 2001), pp. 153-156.
    by T Matsuda, M Nomi, M Ikeya, S Kani, I Oishi, T Terashima, S Takada, Y Minami
    posted to ror1ror2 mouse devt by Auger on 2008-04-28 10:33:13 as ** along with 1 group Dead 60's
  • The adenomatous polyposis coli (APC) tumor suppressor.
    Biochimica et biophysica acta, Vol. 1332, No. 3. (7 June 1997)
    by P Polakis
    posted to wnt by Auger on 2008-04-25 16:58:08 as ** along with 1 group Dead 60's
  • The many ways of Wnt in cancer.
    Current opinion in genetics & development, Vol. 17, No. 1. (February 2007), pp. 45-51.
    by P Polakis
    posted to wnt by Auger on 2008-04-25 16:56:30 as ** along with 1 group Dead 60's
  • When Wnts antagonize Wnts.
    The Journal of cell biology, Vol. 162, No. 5. (1 September 2003), pp. 753-755.
    by G Weidinger, RT Moon
    posted to wnt antago by Auger on 2008-04-25 16:38:52 as ** along with 1 group Dead 60's
  • Wnt-5a inhibits the canonical Wnt pathway by promoting GSK-3-independent beta-catenin degradation.
    The Journal of cell biology, Vol. 162, No. 5. (1 September 2003), pp. 899-908.
    by L Topol, X Jiang, H Choi, L Garrett-Beal, PJ Carolan, Y Yang
    posted to wnt5a wnt pathway inhib c by Auger on 2008-04-25 16:33:31 as ** along with 1 group Dead 60's
  • Activities of the Wnt-1 class of secreted signaling factors are antagonized by the Wnt-5A class and by a dominant negative cadherin in early Xenopus development.
    The Journal of cell biology, Vol. 133, No. 5. (June 1996), pp. 1123-1137.
    by MA Torres, JA Yang-Snyder, SM Purcell, AA DeMarais, LL McGrew, RT Moon
    posted to wnt nc inhib c by Auger on 2008-04-25 16:32:12 as ** along with 1 group Dead 60's
  • Secreted antagonists of the Wnt signalling pathway.
    J Cell Sci, Vol. 116, No. Pt 13. (1 July 2003), pp. 2627-2634.
    by Y Kawano, R Kypta
    posted to wnt antagonists by Auger on 2008-04-25 16:25:59 as ** along with 1 person and 1 group maximilianh Dead 60's
  • Purified Wnt5a protein activates or inhibits beta-catenin-TCF signaling depending on receptor context.
    PLoS Biol, Vol. 4, No. 4. (April 2006)
    by AJ Mikels, R Nusse
    posted to wnt5a ror2 by Auger on 2008-04-25 16:21:39 as ** along with 1 group Dead 60's
  • Culture of Ciona intestinalis in closed systems.
    Developmental dynamics : an official publication of the American Association of Anatomists, Vol. 236, No. 7. (July 2007), pp. 1832-1840.
    by JS Joly, S Kano, T Matsuoka, H Auger, K Hirayama, N Satoh, S Awazu, L Legendre, Y Sasakura
    posted to no-tag by Auger on 2008-04-25 15:26:12 as ** along with 1 group Dead 60's
  • Comparison of the expression of medaka (Oryzias latipes) pitx genes with other vertebrates shows high conservation and a case of functional shuffling in the pituitary.
    Gene, Vol. 406, No. 1-2. (30 December 2007), pp. 42-50.
    by Y Jaszczyszyn, M Haeussler, A Heuzé, M Debiais-Thibaud, D Casane, F Bourrat, JS Joly
    posted to no-tag by Auger on 2008-04-25 15:25:13 as ** along with 1 person maximilianh
  • Chick pulmonary Wnt5a directs airway and vascular tubulogenesis.
    Development (Cambridge, England), Vol. 135, No. 7. (April 2008), pp. 1365-1376.
    by M Loscertales, AJ Mikels, JK Hu, PK Donahoe, DJ Roberts
    posted to tubulogenesis ror by Auger on 2008-04-25 15:15:31 as **
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