Регистрация | Вход в службу | FAQ      [?] 

Yanno Список просмотра [667 articles]

Недавние статьи, Yanno которые соответствуют критериям списка просмотра
  • The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes
    BMC Bioinformatics, Vol. 9 (19 September 2008), 386.
    by Folker Meyer, Daniel Paarmann, Mark D'Souza, Robert D Olson, Elizabeth M Glass, Mike Kubal, Tobias Paczian, Alexis Rodriguez, Rick Stevens, Andreas Wilke, Jared Wilkening, Robert A Edwards
    posted to phylogenetics metagenomics by nuin on 2008-10-10 19:14:39 as ** along with 1 person neils
  • XplorSeq: A software environment for integrated management and phylogenetic analysis of metagenomic sequence data
    BMC Bioinformatics, Vol. 9 (07 October 2008), 420.
    by Daniel N Frank
    posted to phylogenetics metagenomics analysis by nuin on 2008-10-10 19:01:26 as **
  • Phylogenetic classification of short environmental DNA fragments
    Nucl. Acids Res., Vol. 36, No. 7. (1 April 2008), pp. 2230-2239.
    by Lutz Krause, Naryttza N Diaz, Alexander Goesmann, Scott Kelley, Tim W Nattkemper, Forest Rohwer, Robert A Edwards, Jens Stoye
    posted to metagenomics bioinformatics bacteria 454 2008 by hpaces on 2008-10-10 15:47:18 as *** along with 1 person vrich
  • Environmental Genomics Reveals a Single-Species Ecosystem Deep Within Earth
    Science, Vol. 322, No. 5899. (10 October 2008), pp. 275-278.
    by Dylan Chivian, Eoin L Brodie, Eric J Alm, David E Culley, Paramvir S Dehal, Todd Z Desantis, Thomas M Gihring, Alla Lapidus, Li-Hung Lin, Stephen R Lowry, Duane P Moser, Paul M Richardson, Gordon Southam, Greg Wanger, Lisa M Pratt, Gary L Andersen, Terry C Hazen, Fred J Brockman, Adam P Arkin, Tullis C Onstott
    posted to metagenomics genomics extremophile bacteria by neils on 2008-10-10 09:30:40 as ** along with 4 people and 2 groups djkt Katje dinnes kinestetika iSEEM microbiology_nijmegen
  • Comparative Analysis of Human Gut Microbiota by Barcoded Pyrosequencing
    PLoS ONE, Vol. 3, No. 7. (30 July 2008), e2836.
    by Anders F Andersson, Mathilda Lindberg, Hedvig Jakobsson, Fredrik Bäckhed, Pål Nyrén, Lars Engstrand
    posted to metagenomics by krausedo on 2008-10-10 04:54:55 as ** along with 1 person ax
  • The rational exploration of microbial diversity.
    The ISME journal (24 July 2008)
    by Christopher Quince, Thomas P P Curtis, William T T Sloan
    posted to theory metagenomics diversity by Katje to the group microbiology_nijmegen on 2008-10-07 18:47:34 as **** along with 2 people madhadron skato_toyaku
  • Molecular phylogenetic diversity of bacteria associated with soil of the savanna-like Cerrado vegetation
    Microbiological Research (26 February 2007)
    by B Quirino, G Pappas, A Tagliaferro, R Collevatti, E Neto, M Dasilva, M Bustamante, R Kruger
    posted to metagenomics georgios cerrado bacteria by gpappas on 2008-10-05 16:55:07 as **
  • Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields
    Archives of Microbiology, Vol. 190, No. 2. (August 2008), pp. 129-139.
    by Castro, Alinne, Quirino, Betania, Pappas, Georgios, Kurokawa, Adriane, Neto, Eduardo, Kruger, Ricardo
    posted to metagenomics georgios cerrado by gpappas on 2008-10-05 16:54:28 as **
  • High-resolution metagenomics targets specific functional types in complex microbial communities
    Nature Biotechnology, Vol. 26, No. 9. (17 August 2008), pp. 1029-1034.
    by Marina G Kalyuzhnaya, Alla Lapidus, Natalia Ivanova, Alex C Copeland, Alice C Mchardy, Ernest Szeto, Asaf Salamov, Igor V Grigoriev, Dominic Suciu, Samuel R Levine, Victor M Markowitz, Isidore Rigoutsos, Susannah G Tringe, David C Bruce, Paul M Richardson, Mary E Lidstrom, Ludmila Chistoserdova
    posted to methylotrophy methanotrophy methane metagenomics by Huub_odc on 2008-09-29 08:03:05 as ** along with 2 people and 1 group Katje zwang microbiology_nijmegen
  • A data-mining approach for assessing consistency between multiple representations in spatial databases
    International Journal of Geographical Information Science, Vol. 99999, No. 1. (2008), pp. 1-32.
    by D Sheeren, S Mustière, Zucker
    posted to datamining bancos_dados_espaciais by smarzaro on 2008-09-27 01:24:32 as ** along with 1 person xiangzhangchina
  • Microbiology: Metagenomics
    Nature, Vol. 455, No. 7212. (2008), pp. 481-483.
    by Philip Hugenholtz, Gene W Tyson
    posted to review metagenomics by neils on 2008-09-25 02:37:48 as ** along with 1 person aramata
  • Metagenomics: Read length matters
    Appl. Environ. Microbiol. (11 January 2008), AEM.02181-07.
    by Eric K Wommack, Jaysheel Bhavsar, Jacques Ravel
    posted to methods metagenomics 454 by vaulot on 2008-09-24 08:13:42 as ** along with 10 people and 4 groups djkt jmeppley azazello kinestetika Thaverkamp skato_toyaku rvgomes alexisfjdufresne alexl bluto Papers recommended by the Roscoff Plankton Group iSEEM Microbial-Ecology microbiology_nijmegen
  • Genome signature analysis of thermal virus metagenomes reveals Archaea and thermophilic signatures
    BMC Genomics, Vol. 9 (17 September 2008), 420.
    by David T Pride, Thomas Schoenfeld
    posted to virus thermophily sequence metagenomics archaea analysis by neils on 2008-09-18 13:51:45 as **
  • Metagenomics reveals our incomplete knowledge of global diversity.
    Bioinformatics (Oxford, England) (13 July 2008)
    by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames
    posted to metagenomics genome diversity bacteria by vaulot on 2008-09-12 21:01:33 as **** along with 4 people and 3 groups reyez djkt bootsy nuin Papers recommended by the Roscoff Plankton Group Microbial-Ecology iSEEM
  • Simultaneous Assessment of Soil Microbial Community Structure and Function through Analysis of the Meta-Transcriptome
    PLoS ONE, Vol. 3, No. 6. (25 June 2008), e2527.
    by Tim Urich, Anders Lanzén, Ji Qi, Daniel H Huson, Christa Schleper, Stephan C Schuster
    posted to transcriptome soil metagenomics community-structure community-genomics by jmeppley on 2008-09-11 19:09:01 as read
  • Phylogenetic analyses of ribosomal DNA-containing bacterioplankton genome fragments from a 4000m vertical profile in the North Pacific Subtropical Gyre
    Environmental Microbiology, Vol. 10, No. 9. (September 2008), pp. 2313-2330.
    by Pham, D Vinh, Konstantinidis, T Konstantinos, Palden, Tsultrim, Delong, F Edward
    posted to pacific metagenomics clone_libraries bacteria 16s by vaulot on 2008-09-10 15:58:24 as **** along with 2 groups Papers recommended by the Roscoff Plankton Group Microbial-Ecology
  • Using data mining as a strategy for assessing asynchronous discussion forums
    Computers & Education, Vol. 45, No. 1. (August 2005), pp. 141-160.
    by Laurie P Dringus, Timothy Ellis
    posted to mining discussion datamining data by hanbei on 2008-09-10 11:33:33 as ** along with 1 person koles
  • Opinion: Whither or wither geomicrobiology in the era of 'community metagenomics'
    Nature Reviews Microbiology, Vol. 3, No. 7. (01 July 2005), pp. 572-578.
    by Ronald S Oremland, Douglas G Capone, John F Stolz, Jed Fuhrman
    posted to review metagenomics by kinestetika on 2008-09-08 11:19:21 as ** along with 1 person and 2 groups mjetten anammox microbiology_nijmegen
  • Metagenomics is not enough.
    DNA and cell biology, Vol. 27, No. 5. (May 2008), pp. 219-221.
    by J Handelsman
    posted to review metagenomics by kinestetika on 2008-09-08 11:18:49 as ** along with 1 person and 2 groups mjetten anammox microbiology_nijmegen
  • What’s in a Cluster? Automatically Detecting Interesting Interactions in Student E-Discussions
    Intelligent Tutoring Systems (2008), pp. 333-342.
    by Jan Miksatko, Bruce Mclaren
    posted to mining educational education datamining data by hanbei on 2008-09-02 10:00:31 as **
  • Annotation of metagenome short reads using proxygenes.
    Bioinformatics (Oxford, England), Vol. 24, No. 16. (15 August 2008)
    by D Dalevi, NN Ivanova, K Mavromatis, SD Hooper, E Szeto, P Hugenholtz, NC Kyrpides, VM Markowitz
    posted to metagenomics annotation by jmeppley on 2008-09-02 02:54:40 as read
  • Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation.
    Omics : a journal of integrative biology (16 April 2008)
    by Samuel V V Angiuoli, Aaron Gussman, William Klimke, Guy Cochrane, Dawn Field, George Garrity, Chinnappa D D Kodira, Nikos Kyrpides, Ramana Madupu, Victor Markowitz, Tatiana Tatusova, Nick Thomson, Owen White
    posted to software metagenomics bioinformatics annotation by jmeppley on 2008-09-02 02:51:37 as read along with 1 person and 1 group mjetten microbiology_nijmegen
  • The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata.
    Nucleic acids research, Vol. 36, No. Database issue. (January 2008)
    by K Liolios, K Mavromatis, N Tavernarakis, NC Kyrpides
    posted to metagenomics bioinformatics by jmeppley on 2008-09-02 02:45:50 as *** along with 1 person stsaft
  • Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density SNP Genotyping Microarrays
    PLoS Genet, Vol. 4, No. 8. (2008), e1000167.
    by Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig
    posted to snps metagenomics by djkt on 2008-09-01 18:55:00 as ** along with 5 people chrisamiller sometwo jasonbobe rs fpattyn
  • Detection of Large Numbers of Novel Sequences in the Metatranscriptomes of Complex Marine Microbial Communities
    PLoS ONE, Vol. 3, No. 8. (2008), e3042.
    by Jack A Gilbert, Dawn Field, Ying Huang, Rob Edwards, Weizhong Li, Paul Gilna, Ian Joint
    posted to metagenomics microbiology sequencing transcriptomics by neils on 2008-08-23 02:15:14 as **
  • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    Nature (20 July 2008)
    by Julius S Lipp, Yuki Morono, Fumio Inagaki, Kai-Uwe Hinrichs
    posted to ecology metagenomics microbes by djkt on 2008-08-20 20:14:10 as *** along with 1 person and 1 group neils iSEEM
  • The next meta-challenge for Bioinformatics.
    Bioinformation, Vol. 2, No. 8. (2008), pp. 358-362.
    by W Valdivia-Granda
    posted to bioinformatics metagenomics by jyuh on 2008-08-19 03:14:48 as **
  • The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples.
    PLoS ONE, Vol. 3, No. 1. (2008)
    by SJ Williamson, DB Rusch, S Yooseph, AL Halpern, KB Heidelberg, JI Glass, C Andrews-Pfannkoch, D Fadrosh, CS Miller, G Sutton, M Frazier, JC Venter
    posted to empirical metagenomics ploscb08 virus by jlgreen on 2008-08-18 19:04:16 as ** along with 2 people and 3 groups jdelcampo mjetten Microbial-Ecology microbiology_nijmegen iSEEM
  • Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil
    Science, Vol. 309, No. 5739. (26 August 2005), pp. 1387-1390.
    by Jason Gans, Murray Wolinsky, John Dunbar
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-15 18:22:43 as ** along with 4 people and 1 group knaseanka jmeppley paleorthid jlgreen iSEEM
  • Binning sequences using very sparse labels within a metagenome
    BMC Bioinformatics, Vol. 9 (28 April 2008), 215.
    by Chon-Kit K Chan, Arthur L Hsu, Saman K Halgamuge, Sen-Lin Tang
    posted to metagenomics microbes by djkt on 2008-08-15 18:13:29 as ** along with 4 people and 2 groups alexl mjetten werwiesel jlgreen microbiology_nijmegen iSEEM
  • Reverse Methanogenesis: Testing the Hypothesis with Environmental Genomics
    Science, Vol. 305, No. 5689. (3 September 2004), pp. 1457-1462.
    by Steven J Hallam, Nik Putnam, Christina M Preston, John C Detter, Daniel Rokhsar, Paul M Richardson, Edward F Delong
    posted to anme metagenomics by kinestetika on 2008-08-14 11:43:28 as ** along with 4 people and 2 groups bluto calamar cursonivel1 jmeppley cursonivel1 microbiology_nijmegen
  • A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea.
    Genome biology, Vol. 6, No. 2. (2005)
    by L Chistoserdova, JA Vorholt, ME Lidstrom
    posted to anme genome metagenomics methylotroph by kinestetika on 2008-08-14 11:42:56 as ** along with 1 group microbiology_nijmegen
  • Annotation of metagenome short reads using proxygenes
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i7-13.
    by Daniel Dalevi, Natalia N Ivanova, Konstantinos Mavromatis, Sean D Hooper, Ernest Szeto, Philip Hugenholtz, Nikos C Kyrpides, Victor M Markowitz
    posted to 454 annotation genome metagenomics by neils on 2008-08-11 00:33:57 as **
  • Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions
    ISME J, Vol. 2, No. 8. (May 2008), pp. 865-886.
    by Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, David Moreira, Jose C Alba, Elena Ivars-Martinez, Matthew R Henn, Emmanuel Talla, Purificacion Lopez-Garcia
    posted to diversity ecology metagenomics microbes by djkt on 2008-08-08 02:28:19 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • A bacterial metapopulation adapts locally to phage predation despite global dispersal
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 293-297.
    by Victor Kunin, Shaomei He, Falk Warnecke, Brook S Peterson, Garcia, Matthew Haynes, Natalia Ivanova, Linda L Blackall, Mya Breitbart, Forest Rohwer, Katherine D Mcmahon, Philip Hugenholtz
    posted to ecology metagenomics virus wastewater by kinestetika on 2008-08-04 13:33:19 as ** along with 2 people and 1 group jmeppley Thaverkamp microbiology_nijmegen
  • Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution
    Microbial Ecology, Vol. 53, No. 2. (February 2007), pp. 197-207.
    by Ramette, Alban, Tiedje, James
    posted to diversity ecology evolution metagenomics microbes by djkt on 2008-07-29 21:13:00 as read along with 1 person and 2 groups jlgreen Green Lab iSEEM
  • Biodiversity and biogeography of phages in modern stromatolites and thrombolites
    Nature (02 March 2008)
    by Christelle Desnues, Beltran Rodriguez-Brito, Steve Rayhawk, Scott Kelley, Tuong Tran, Matthew Haynes, Hong Liu, Mike Furlan, Linda Wegley, Betty Chau, Yijun Ruan, Dana Hall, Florent E Angly, Robert A Edwards, Linlin Li, Rebecca V Thurber, Pamela R Reid, Janet Siefert, Valeria Souza, David L Valentine, Brandon K Swan, Mya Breitbart, Forest Rohwer
    posted to diversity ecology metagenomics virus by djkt on 2008-07-29 20:46:52 as ** along with 2 people and 2 groups dayjm jlgreen Green Lab iSEEM
  • Tracking microbial biodiversity through molecular and genomic ecology.
    Research in microbiology, Vol. 159, No. 1. (b 2008), pp. 67-73.
    by P López-García, D Moreira
    posted to ecology evolution metagenomics microbes popgen review by djkt on 2008-07-29 20:36:24 as read along with 2 people and 3 groups mjetten jlgreen microbiology_nijmegen Green Lab iSEEM
  • Community genomics in microbial ecology and evolution
    Nature Reviews Microbiology, Vol. 3, No. 6. (01 June 2005), pp. 489-498.
    by Eric E Allen, Jillian F Banfield
    posted to evolution metagenomics microbes review by djkt on 2008-07-29 20:24:26 as read along with 4 people and 2 groups knaseanka jmeppley mcox jlgreen Green Lab iSEEM
  • Accurate phylogenetic classification of variable-length DNA fragments
    Nature Methods, Vol. 4, No. 1. (10 December 2006), pp. 63-72.
    by Alice C Mchardy, Héctor G Martín, Aristotelis Tsirigos, Philip Hugenholtz, Isidore Rigoutsos
    posted to metagenomics microbes phylogenetics by djkt on 2008-07-29 20:01:28 as read along with 4 people and 3 groups bluto azazello wenhan jlgreen MBLAB Green Lab iSEEM
  • The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity.
    The ISME journal (8 May 2008)
    by Stephen J J Bent, Larry J J Forney
    posted to diversity metagenomics microbes by djkt on 2008-07-29 19:48:18 as read along with 4 people and 4 groups vaulot jdelcampo jlgreen skembel Papers recommended by the Roscoff Plankton Group Microbial-Ecology Green Lab iSEEM
  • MEGAN analysis of metagenomic data.
    Genome Res, Vol. 17, No. 3. (March 2007), pp. 377-386.
    by DH Huson, AF Auch, J Qi, SC Schuster
    posted to 2007 bioinformatics ht_sequencing metagenomics phylogeny software by hpaces on 2008-07-29 16:07:03 as ** along with 5 people and 2 groups azazello wenhan carpi alexl mjetten anammox microbiology_nijmegen
  • Metagenomic analysis of the microbial community associated with the coral Porites astreoides
    Environmental Microbiology, Vol. 0, No. 0. (0000), pp. ???-???.
    by Linda Wegley, Robert Edwards, Beltran Rodriguez-Brito, Hong Liu, Forest Rohwer
    posted to 2007 454 ht_sequencing marine metagenomics by hpaces on 2008-07-29 15:49:44 as ** along with 2 people bluto vrich
  • Building on basic metagenomics with complementary technologies
    Genome Biology, Vol. 8 (28 December 2007), 231.
    by Falk Warnecke, Philip Hugenholtz
    posted to metagenomics by jlgreen to the group iSEEM on 2008-07-25 23:45:00 as ** along with 2 people and 2 groups alexisfjdufresne mjetten microbiology_nijmegen Green Lab
  • Viral population estimation using pyrosequencing.
    PLoS computational biology, Vol. 4, No. 4. (April 2008)
    by N Eriksson, L Pachter, Y Mitsuya, SY Rhee, C Wang, B Gharizadeh, M Ronaghi, RW Shafer, N Beerenwinkel
    posted to diversity metagenomics popgen virus by djkt on 2008-07-24 23:16:52 as read along with 2 people and 1 group jmeppley bmaust iSEEM
  • Inference of population genetic parameters in metagenomics: A clean look at messy data
    Genome Res., Vol. 16, No. 10. (1 October 2006), pp. 1320-1327.
    by Philip L Johnson, Montgomery Slatkin
    posted to metagenomics popgen by djkt on 2008-07-24 23:14:43 as read along with 2 people and 1 group jmeppley bluto iSEEM
  • Investigations of Oligonucleotide Usage Variance Within and Between Prokaryotes
    PLoS Comput Biol, Vol. 4, No. 4. (18 April 2008), e1000057.
    by Jon Bohlin, Eystein Skjerve, David W Ussery
    posted to metagenomics microbes by djkt on 2008-07-24 23:12:46 as read along with 1 person and 2 groups jlgreen iSEEM Green Lab
  • FastGroupII: A web-based bioinformatics platform for analyses of large 16S rDNA libraries
    BMC Bioinformatics, Vol. 7, No. 1. (2006)
    by Yanan Yu, Mya Breitbart, Pat Mcnairnie, Forest Rohwer
    posted to metagenomics rna by djkt on 2008-07-24 23:08:05 as read along with 1 group iSEEM
  • Metabolic complementarity and genomics of the dual bacterial symbiosis of sharpshooters.
    PLoS Biol, Vol. 4, No. 6. (June 2006)
    by D Wu, SC Daugherty, SE Van Aken, GH Pai, KL Watkins, H Khouri, LJ Tallon, JM Zaborsky, HE Dunbar, PL Tran, NA Moran, JA Eisen
    posted to metagenomics microbes rna by djkt on 2008-07-24 22:43:18 as read along with 1 person and 1 group operon iSEEM
  • Predicting prokaryotic ecological niches using genome sequence analysis.
    PLoS ONE, Vol. 2, No. 1. (2007)
    by G Suen, BS Goldman, RD Welch
    posted to ecology metagenomics microbes by djkt on 2008-07-24 22:41:01 as read along with 5 people and 3 groups jdelcampo blobbybirdman Thaverkamp kroos druvus Microbial-Ecology Myxo group iSEEM
    • Вы можете ссылаться на эту страницу по адресу: http://www.citeulike.org/user/Yanno/watchlist

    Result page: 1 2 3 4 5 6 7 8 9 10 Next RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.