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ankur_iitg library [54 articles]

Статьи, недавно добавленные в библиотеку ankur_iitg .
  • Non-adaptive evolution of genome complexity
    Wiley Interscience, Vol. 28 (2006), pp. 979-982.
    by SJ Yi
    posted to complexity evolution genome non-adaptive by ankur_iitg on 2007-08-05 13:39:58 as read
  • Sequence-specific binding of single-stranded RNA: is there a code for recognition?
    Nucleic Acids Research, Vol. 34, No. 17. (October 2006), pp. 4943-4959.
    posted to binding recognition rna single-stranded by ankur_iitg on 2007-08-05 13:34:05 as ***** along with 1 person marck
  • What's So Hot about Recombination Hotspots?
    PLoS Biology, Vol. 2, No. 6. (1 June 2004), e190.
    by Jody Hey
    posted to hotspots recombination by ankur_iitg on 2007-08-05 13:31:43 as read
  • Energetics of protein–DNA interactions
    Nucleic Acids Research, Vol. 35, No. 4. (January 2007), pp. 1039-1047.
    by JE Donald, WW Chen, E Shakhnowich
    posted to energetics interaction protein-dna by ankur_iitg on 2007-08-05 13:29:00 as *****
  • Non-EST-based prediction of novel alternatively spliced cassette exons with cell signaling function in Caenorhabditis elegans and human
    Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3192-3202.
    by German G Leparc, Robi D Mitra
  • Machine Learning and Its Applications to Biology
    PLoS Computational Biology, Vol. 3, No. 6. (June 2007), pp. 0953-0963.
    by AL Tarca, VJ Carey, X Chen, R Romero, S Draghici
    posted to appliction biology learning machine by ankur_iitg on 2007-08-05 13:20:41 as read
  • Correlated Asymmetry of Sequence and Functional Divergence Between Duplicate Proteins of Saccharomyces cerevisiae
    Molecular Biology and Evolution, Vol. 23, No. 5. (15 May 2006), pp. 1068-1075.
    by Seong-Ho Kim, Soojin V Yi
    posted to asymmetry correlation divergence functional sequence by ankur_iitg on 2007-08-05 13:13:17 as *****
  • Computational identification of transcriptional regulatory elements in DNA sequence
    Nucl. Acids Res., Vol. 34, No. 12. (19 July 2006), pp. 3585-3598.
    by Debraj Guhathakurta
  • Molecular Evolution of Recombination Hotspots and Highly Recombining Pseudoautosomal Regions in Hominoids
    Molecular Biology and Evolution, Vol. 22, No. 5. (15 May 2005), pp. 1223-1230.
    by Soojin Yi, Wen-Hsiung Li
    posted to evolution hotspots molecular pseudoautosomal by ankur_iitg on 2007-08-05 13:07:06 as *****
  • Evolutionary rates vary among rRNA structural elements
    Nucleic Acids Research, Vol. 35, No. 10. (2007), pp. 3339-3354.
    by S Smit, J Widmann, R Knight
    posted to evolution rates rrna structural by ankur_iitg on 2007-08-05 13:02:08 as *****
  • Amino acids determining enzyme-substrate specificity in prokaryotic and eukaryotic protein kinases
    PNAS, Vol. 100, No. 8. (15 April 2003), pp. 4463-4468.
    by Lewyn Li, Eugene I Shakhnovich, Leonid A Mirny
  • From the Cover: Structural basis and prediction of substrate specificity in protein serine/threonine kinases
    PNAS, Vol. 100, No. 1. (7 January 2003), pp. 74-79.
    by Ross I Brinkworth, Robert A Breinl, Bostjan Kobe
  • Detecting Changes in the Functional Constraints of Paralogous Genes
    Journal of Molecular Evolution, Vol. 52, No. 1. (1 January 2001), pp. 17-28.
    by , Ignacio M Rid="a1">, , Mario, , Fernando G Rid="a1">, , Eladio B Rid="a1">, , Andrés M Rid="a1">
    posted to constraints functional genes paralogous by ankur_iitg on 2007-08-04 05:12:21 as read
  • Position and distance specificity are important determinants of cis-regulatory motifs in addition to evolutionary conservation
    Nucl. Acids Res., Vol. 35, No. 10. (11 May 2007), pp. 3203-3213.
    by Saran Vardhanabhuti, Junwen Wang, Sridhar Hannenhalli
  • Comprehensive splice-site analysis using comparative genomics.
    Nucleic Acids Res (12 August 2006)
    by Nihar Sheth, Xavier Roca, Michelle L L Hastings, Ted Roeder, Adrian R R Krainer, Ravi Sachidanandam
  • The interaction networks of structured RNAs
    Nucleic Acids Research, Vol. 34, No. 22. (December 2006), pp. 6587-6604.
  • Positive and negative selection on the human genome.
    Genetics, Vol. 158, No. 3. (July 2001), pp. 1227-1234.
    by JC Fay, GJ Wyckoff, CI Wu
  • A sliding window-based method to detect selective constraints in protein-coding genes and its application to RNA viruses.
    J Mol Evol, Vol. 55, No. 5. (November 2002), pp. 509-521.
    by MA Fares, SF Elena, J Ortiz, A Moya, E Barrio
  • Codon-Substitution Models to Detect Adaptive Evolution that Account for Heterogeneous Selective Pressures Among Site Classes
    Mol Biol Evol, Vol. 19, No. 1. (1 January 2002), pp. 49-57.
    by Ziheng Yang, Willie J Swanson
  • Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution.
    Mol Biol Evol, Vol. 18, No. 8. (August 2001), pp. 1585-1592.
  • Estimation of the Transition/Transversion Ratio
    Journal of Molecular Evolution, Vol. 46, No. 5. (1 May 1998), pp. 521-533.
    by , Yasuo Ina
    posted to estimate ratio transition transversion by ankur_iitg on 2007-07-26 12:57:18 as read
  • Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models.
    Mol Biol Evol, Vol. 17, No. 1. (January 2000), pp. 32-43.
    by Z Yang, R Nielsen
  • Selectionism and Neutralism in Molecular Evolution
    Mol Biol Evol, Vol. 22, No. 12. (1 December 2005), pp. 2318-2342.
    by Masatoshi Nei
  • Near-neutrality in evolution of genes and gene regulation.
    Proc Natl Acad Sci U S A, Vol. 99, No. 25. (10 December 2002), pp. 16134-16137.
    by T Ohta
  • A method for detecting positive selection at single amino acid sites
    Mol Biol Evol, Vol. 16, No. 10. (1 October 1999), pp. 1315-1328.
    posted to aminoacid detect positive selection site by ankur_iitg on 2007-07-26 12:46:09 as read
  • Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions.
    Mol Biol Evol, Vol. 3, No. 5. (September 1986), pp. 418-426.
    by M Nei, T Gojobori
  • Evolutionary constraints in conserved nongenic sequences of mammals
    Genome Res., Vol. 15, No. 10. (1 October 2005), pp. 1373-1378.
    by Peter D Keightley, Gregory V Kryukov, Shamil Sunyaev, Daniel L Halligan, Daniel J Gaffney
  • Estimating Absolute Rates of Molecular Evolution and Divergence Times: A Penalized Likelihood Approach
    Mol Biol Evol, Vol. 19, No. 1. (1 January 2002), pp. 101-109.
    by Michael J Sanderson
    posted to divergence evolution molecular rates time by ankur_iitg on 2007-07-26 12:37:25 as read
  • Essential Genes Are More Evolutionarily Conserved Than Are Nonessential Genes in Bacteria
    Genome Res., Vol. 12, No. 6. (1 June 2002), pp. 962-968.
    by King I Jordan, Igor B Rogozin, Yuri I Wolf, Eugene V Koonin
  • DNA and the Neutral Theory
    Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, Vol. 312, No. 1154. (1986), pp. 343-354.
    by M Kimura
    posted to dna evolution neutral selection theory by ankur_iitg on 2007-07-26 12:28:48 as read
  • Evolutionary algorithms in computer-aided molecular design
    Journal of Computer-Aided Molecular Design, Vol. 10, No. 4. (1996), pp. 337-358.
    by David E Clark, David R Westhead
    posted to algorithms design evolution molecular by ankur_iitg on 2007-07-21 10:58:59 as read along with 1 person Alois
  • The Proof and Measurement of Association between Two Things
  • Numbers Game
    Chemistry and industry, Vol. 10 (2006), pp. 14-16.
    by Houlton Sarah
    posted to discovery drug screening by ankur_iitg on 2007-07-21 10:50:41 as read
  • Likelihood based hierarchical clustering
    Signal Processing, IEEE Transactions on [see also Acoustics, Speech, and Signal Processing, IEEE Transactions on], Vol. 52, No. 8. (2004), pp. 2308-2321.
    by RM Castro, MJ Coates, RD Nowak
    posted to clustering hierarchical likelihood by ankur_iitg on 2007-07-21 10:44:50 as read
  • New molecular shape descriptors: Application in database screening
    Journal of Computer-Aided Molecular Design, Vol. 9, No. 1. (1 February 1995), pp. 1-12.
    by Andrew C Good, Todd J Ewing, Daniel A Gschwend, Irwin D Kuntz
    posted to databases descriptors molecular screening structure by ankur_iitg on 2007-07-21 10:41:56 as read
  • Enhancing the diversity of a corporate database using chemical database clustering and analysis
    Journal of Computer-Aided Molecular Design, Vol. 9, No. 5. (1 October 1995), pp. 407-416.
    by Norah E Shemetulskis, James B Dunbar, Bonnie W Dunbar, David W Moreland, Christine Humblet
    posted to analysis chemical clustering databases diversity by ankur_iitg on 2007-07-21 10:38:35 as read
  • Identification of Biological Activity Profiles Using Substructural Analysis and Genetic Algorithms
    J. Chem. Inf. Model., Vol. 38, No. 2. (23 March 1998), pp. 165-179.
    by VJ Gillet, P Willett, J Bradshaw
  • Genetic algorithms
    ACM Comput. Surv., Vol. 28, No. 1. (March 1996), pp. 77-80.
    by Stephanie Forrest
    posted to algorithms basics genetic by ankur_iitg on 2007-07-21 10:35:19 as read
  • Hit and Lead Generation: Beyond High-Throughput Screening.
    Nature Review Drug Discovery, Vol. 2 (May 2003), pp. 369-378.
    by Bleicher Kh, H Böhm, K Müller, Alanine Ai
    posted to clustering discovery drug finding hit lead by ankur_iitg on 2007-07-21 10:33:35 as read
  • Identification of a Preferred Set of Molecular Descriptors for Compound Classification Based on Principal Component Analysis
    J. Chem. Inf. Model., Vol. 39, No. 4. (26 July 1999), pp. 699-704.
    by L Xue, J Godden, H Gao, J Bajorath
    posted to clustering descriptors finding molecular pca by ankur_iitg on 2007-07-21 10:30:20 as read
  • Discovering parametric clusters in social small-world graphs
    (2005), pp. 1231-1238.
    by Jonathan Mcpherson, Kwan-Liu Ma, Michael Ogawa
  • New techniques for best-match retrieval
    ACM Trans. Inf. Syst., Vol. 8, No. 2. (April 1990), pp. 140-158.
    by Dennis Shasha, Tsong-Li Wang
    posted to analysis descriptors new properties similarity by ankur_iitg on 2007-07-21 10:25:11 as read
  • A study of standardization of variables in cluster analysis
    Journal of Classification, Vol. 5, No. 2. (1988), pp. 181-204.
    by Glenn W Milligan, Martha C Cooper
  • Hierarchical Grouping to Optimize an Objective Function
    Journal of the American Statistical Association, Vol. 58, No. 301. (1963), pp. 236-244.
    by Joe H Ward
  • Chemical Similarity Using Physiochemical Property Descriptors
    J. Chem. Inf. Model., Vol. 36, No. 1. (24 January 1996), pp. 118-127.
    by SK Kearsley, S Sallamack, EM Fluder, JD Andose, RT Mosley, RP Sheridan
    posted to atom chemical descriptors physiochemical similarity by ankur_iitg on 2007-07-21 10:19:45 as read
  • Chemical Similarity Using Geometric Atom Pair Descriptors
    J. Chem. Inf. Model., Vol. 36, No. 1. (24 January 1996), pp. 128-136.
    by RP Sheridan, MD Miller, DJ Underwood, SK Kearsley
    posted to atom chemical descriptors geometric similarity by ankur_iitg on 2007-07-21 10:17:59 as read
  • Chemical Similarity Searching
    Journal of Chemical Information and Computer Sciences, Vol. 38 (1998), pp. 983-996.
    by P Willett
  • Molecular Descriptors for Effective Classification of Biologically Active Compounds Based on Principal Component Analysis Identified by a Genetic Algorithm
    J. Chem. Inf. Model., Vol. 40, No. 3. (22 May 2000), pp. 801-809.
    by L Xue, J Bajorath
    posted to algorithm biological compounds descriptors genetic molecular pca by ankur_iitg on 2007-07-21 10:09:49 as read
  • Similarity Searching and Clustering of Chemical-Structure Databases Using Molecular Property Data
    Journal of Chemical Information and Computer Sciences, Vol. 34, No. 5. (1994), pp. 1094-1102.
    by Downs Gm, P Willett, W Fisanick
    posted to chemical clustering molecular properties similarity structure by ankur_iitg on 2007-07-21 10:06:10 as read
  • Recent developments in the analysis of comparative data.
    Q Rev Biol, Vol. 63, No. 4. (December 1988), pp. 413-440.
    by MD Pagel, PH Harvey
    posted to analysis comparison data by ankur_iitg on 2007-07-21 09:52:15 as read
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