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austin pseudoknot [10 articles]

Recent papers added to austin library classified by the tag pseudoknot. You can also see everyone's pseudoknot.
  • Prediction and statistics of pseudoknots in RNA structures using exactly clustered stochastic simulations.
    Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15310-15315.
  • Modeling RNA folding paths with pseudoknots: Application to hepatitis delta virus ribozyme
    PNAS, Vol. 97, No. 12. (6 June 2000), pp. 6515-6520.
    by Herve Isambert, Eric D Siggia
  • Pseudoknots: RNA structures with diverse functions.
    PLoS Biol, Vol. 3, No. 6. (June 2005)
    by DW Staple, SE Butcher
  • Regulation of ribozyme cleavage activity by oligonucleotides.
    Methods Mol Biol, Vol. 252 (2004), pp. 165-177.
    posted to activation hairpin hammerhead pseudoknot ribozyme by austin on 2007-09-03 15:08:36 as read
  • Induction of ribozyme activity by anti-ribozyme oligonucleotides.
    Nucleic Acids Symp Ser, No. 42. (1999), pp. 279-280.
    posted to activation hammerhead pseudoknot ribozyme by austin on 2007-09-03 15:07:16 as read
  • Pseudo--half-knot formation with RNA.
    Science, Vol. 257, No. 5072. (14 August 1992), pp. 958-961.
    by DJ Ecker, TA Vickers, TW Bruice, SM Freier, RD Jenison, M Manoharan, M Zounes
    posted to pseudoknot rna by austin on 2007-09-03 01:06:43 as read
  • Construction of new ribozymes requiring short regulator oligonucleotides as a cofactor
    Journal of Molecular Biology, Vol. 299, No. 5. (23 June 2000), pp. 1231-1243.
    by Yasuo Komatsu, Shigeko Yamashita, Nobuhiro Kazama, Kaoru Nobuoka, Eiko Ohtsuka
    posted to activation pseudoknot ribozyme by austin on 2007-09-03 00:42:23 as read
  • A new principle of RNA folding based on pseudoknotting.
    Nucleic Acids Res, Vol. 13, No. 5. (11 March 1985), pp. 1717-1731.
    by CW Pleij, K Rietveld, L Bosch
    posted to folding pseudoknot rna by austin on 2007-08-28 20:27:56 as *****
  • Kinefold web server for RNA/DNA folding path and structure prediction including pseudoknots and knots.
    Nucleic Acids Res, Vol. 33, No. Web Server issue. (1 July 2005)
  • ILM: a web server for predicting RNA secondary structures with pseudoknots.
    Nucleic Acids Res, Vol. 32, No. Web Server issue. (1 July 2004)
    by J Ruan, GD Stormo, W Zhang
    posted to folding prediction pseudoknot rna website by austin on 2007-08-27 14:35:42 as read along with 1 person balajis
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