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blobbybirdman amino [15 articles]

Recent papers added to blobbybirdman library classified by the tag amino. You can also see everyone's amino.
  • Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo
    BMC Bioinformatics, Vol. 3, No. 1. (2002)
    by N Rajewsky, M Vergassola, U Gaul, ED Siggia
    posted to acid algorithms amino animals binding biologymethods body chromosome comparative computational consensus developmentalgenetics drosophila expression gene geneticgenetics genomicsmethods govt mappingmethods melanogasterembryologygenetics motifs non-phs patterninggenetics phs proteinsgenetics regulation research sequence sitesgenetics software study support trans-activatorsgeneticsmetabolism transcription us bibtex-import by blobbybirdman on 2007-10-09 17:56:32 as **
  • Design superiority of palindromic DNA sites for site-specific recognition of proteins: tests using protein stitchery
    Proc Natl Acad Sci U S A, Vol. 90, No. 11. (1993), pp. 4892-6.
    by C Park, JL Campbell, 3rd
    posted to acid amino base binding comparative conformation data dna-binding dnageneticsmetabolism gene genes govt homology jun leucine macromolecular models molecular non-phs non-us nucleic oligodeoxyribonucleotideschemical oncogene p65gag-jungeneticsmetabolism peptideschemical protein proteinsgeneticsmetabolism rearrangement research secondary sequence sites structural structure study substances support synthesismetabolism us zippersgeneticsphysiology bibtex-import by blobbybirdman on 2007-10-09 17:56:31 as **
  • Gibbs motif sampling: detection of bacterial outer membrane protein repeats
    Protein Sci, Vol. 4, No. 8. (1995), pp. 1618-32.
    by AF Neuwald, JS Liu, CE Lawrence
    posted to acid algorithms amino animals bacterial chemical colichemistry data escherichia homology human membrane models molecular outer proteinschemistry sequence bibtex-import by blobbybirdman on 2007-10-09 17:56:30 as **
  • A powerful non-homology method for the prediction of operons in prokaryotes
    Bioinformatics, Vol. 18 Suppl 1 (2002), pp. S329-36.
    by Moreno G Hagelsieb, Collado J Vides
    posted to acid algorithms amino analysis bacteriagenetics bacterial bacterialgenetics base cells chromosome comparative data dnamethods expression factorsgenetics gene genome govt homology mappingmethods molecular non-us operongenetics profilingmethods prokaryotic regulation research sequence study support transcription bibtex-import by blobbybirdman on 2007-10-09 17:56:30 as **
  • Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment
    Science, Vol. 262, No. 5131. (1993), pp. 208-14.
    by CE Lawrence, SF Altschul, MS Boguski, JS Liu, AF Neuwald, JC Wootton
    posted to acid algorithms alignmentmethods amino carrier data govt helix-loop-helix isoprenylation models molecular motifs phs protein proteinschemistry secondary sequence software statistical structure support transferaseschemistry us bibtex-import by blobbybirdman on 2007-10-09 17:56:26 as **
  • Diversity and specificity in transcriptional regulation: the benefits of heterotypic dimerization
    Trends Biochem Sci, Vol. 16, No. 11. (1991), pp. 417-22.
    by P Lamb, SL Mcknight
    posted to acid amino animals base data dna-binding expression gene genetic molecular proteinsgenetics regulation sequence transcription bibtex-import by blobbybirdman on 2007-10-09 17:56:26 as **
  • Identification of regulatory elements using a feature selection method
    Bioinformatics, Vol. 18, No. 9. (2002), pp. 1167-75.
    by S Keles, M van der Laan, MB Eisen
    posted to acid amino analysis analysismethods and array base carlo cerevisiaegenetics data dnamethods expression gene genetic govt method mitosisgenetics models molecular monte motifsgenetics of oligonucleotide pattern phs recognition regulationgenetics reproducibility results saccharomyces sensitivity sequence specificity statistical support us bibtex-import by blobbybirdman on 2007-10-09 17:56:24 as **
  • Subtle motifs: defining the limits of motif finding algorithms
    Bioinformatics, Vol. 18, No. 10. (2002), pp. 1382-90.
    by U Keich, PA Pevzner
    posted to acid acidgenetics algorithms alignmentmethods amino analysis analysismethods and base benchmarking comparative consensus control data dna dnagenetics dnamethods genetic models molecular motifsgenetics mutational nucleic of processes quality regulatory reproducibility results sensitivity sequence sequencegenetics sequences software specificity statistical stochastic study bibtex-import by blobbybirdman on 2007-10-09 17:56:23 as **
  • Finding motifs in the twilight zone
    Bioinformatics, Vol. 18, No. 10. (2002), pp. 1374-81.
    by U Keich, PA Pevzner
    posted to acid acidgenetics algorithms alignmentmethods amino analysis and base benchmarking cerevisiaegeneticsmetabolism coligeneticsmetabolism comparative consensus control data dna-binding dnagenetics dnamethods escherichia geneticsgenetics molecular motifsgenetics nucleic promoter proteinsgenetics quality regions regulatory saccharomyces sensitivity sequence sequencegenetics sequences specificity study bibtex-import by blobbybirdman on 2007-10-09 17:56:23 as **
  • BioOptimizer: a Bayesian scoring function approach to motif discovery
    Bioinformatics, Vol. 20, No. 10. (2004), pp. 1557-64.
    by ST Jensen, JS Liu
    posted to acid algorithms alignmentmethods amino analysis bayes binding comparative dnachemistry dnamethods factorschemistry govt motifs non-phs phs protein research sequence sites software study support theorem transcription us bibtex-import by blobbybirdman on 2007-10-09 17:56:23 as **
  • Distribution patterns of over-represented k-mers in non-coding yeast DNA
    Bioinformatics, Vol. 18, No. 4. (2002), pp. 513-28.
    by S Hampson, D Kibler, P Baldi
    posted to acid amino analysis and array base cluster conserved data databases dnamethodsstatistics expression fungal gene genetic genome govt homology models molecular motifsgenetics non-us nucleic numerical of oligonucleotide pattern recognition regulationgenetics reproducibility results sensitivity sequence sequencegenetics specificity statistical support yeastsgenetics bibtex-import by blobbybirdman on 2007-10-09 17:56:21 as **
  • Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids
    Nucleic Acids Res, Vol. 21, No. 7. (1993), pp. 1655-64.
    by K Frech, G Herrmann, T Werner
    posted to acid algorithms alignmentmethods amino base binding comparative consensus data dna-binding factorsclassificationmetabolism genetic models molecular nucleic pattern protein proteinsclassificationmetabolism recognition regulatory sequence sequences sites software study transcription bibtex-import by blobbybirdman on 2007-10-09 17:56:19 as **
  • Quantitative discrimination of MEF2 sites
    Mol Cell Biol, Vol. 16, No. 1. (1996), pp. 437-41.
    by JW Fickett
    posted to acid amino animals binding biometry data dna-binding dnametabolism factorsgeneticsmetabolism govt human molecular musclesmetabolism mutagenesis non-us phs proteinsgeneticsmetabolism sequence site-directed sitesgenetics support transcription us bibtex-import by blobbybirdman on 2007-10-09 17:56:19 as **
  • Gene regulation for higher cells: a theory
    Science, Vol. 165, No. 891. (1969), pp. 349-57.
    by RJ Britten, EH Davidson
    posted to acid amino biological cell code differentiation dna evolution genes genetic models regulator rna sequence bibtex-import by blobbybirdman on 2007-10-09 17:56:13 as **
  • The value of prior knowledge in discovering motifs with MEME
    Proc Int Conf Intell Syst Mol Biol, Vol. 3 (1995), pp. 21-9.
    by TL Bailey, C Elkan
    posted to acid algorithms amino automated base comparative dnachemistry govt models of pattern phs proteinschemistry recognition reproducibility research results sequence study support theoretical us bibtex-import by blobbybirdman on 2007-10-09 17:56:10 as **
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