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cjeans hmm [9 articles]

Recent papers added to cjeans library classified by the tag hmm. You can also see everyone's hmm.
  • Uniformization for sampling realizations of Markov processes: Applications to Bayesian implementations of codon substitution models
    Bioinformatics (14 November 2007), btm532.
    by Nicolas Rodrigue, Herve Philippe, Nicolas Lartillot
    posted to algorithm statistics bayesian hmm by cjeans on 2007-11-15 06:13:20 as ** along with 1 person djkt
  • The SUPERFAMILY database in 2004: additions and improvements.
    Nucleic Acids Res, Vol. 32, No. Database issue. (1 January 2004)
    by M Madera, C Vogel, SK Kummerfeld, C Chothia, J Gough
    posted to database domain hmm structure by cjeans on 2007-11-11 11:19:15 as ** along with 1 person Cortel
  • SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments.
    Nucleic Acids Res, Vol. 30, No. 1. (1 January 2002), pp. 268-272.
    by J Gough, C Chothia
    posted to database domain hmm structure by cjeans on 2007-11-11 11:18:56 as **
  • The SUPERFAMILY database in structural genomics.
    Acta Crystallogr D Biol Crystallogr, Vol. 58, No. Pt 11. (November 2002), pp. 1897-1900.
    by J Gough
    posted to database domain hmm structure by cjeans on 2007-11-11 11:15:44 as **
  • Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure.
    J Mol Biol, Vol. 313, No. 4. (2 November 2001), pp. 903-919.
    by J Gough, K Karplus, R Hughey, C Chothia
    posted to database domain hmm by cjeans on 2007-11-11 11:14:50 as **
  • MORPH: Probabilistic Alignment Combined with Hidden Markov Models of cis-Regulatory Modules
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e216.
    by Saurabh Sinha, Xin He
    posted to hmm tfbs by cjeans on 2007-11-10 02:40:52 as ** along with 7 people and 2 groups ana dpollard zwang maximilianh hpaces Ema uwe EisenLab cis-regulatory-evolution
  • Profile hidden Markov models.
    Bioinformatics, Vol. 14, No. 9. (1998), pp. 755-763.
    by SR Eddy
    posted to hmm sequence by cjeans on 2007-11-08 08:05:26 as ** along with 9 people ca3295 miguel chad_davis eweaver dgront rabio suizan nklee yoanjacquemin
  • Hidden Markov models
    Current Opinion in Structural Biology, Vol. 6, No. 3. (June 1996), pp. 361-365.
    by Sean R Eddy
    posted to hmm sequence by cjeans on 2007-11-08 08:03:39 as **
  • Hidden Markov models in computational biology. Applications to protein modeling.
    J Mol Biol, Vol. 235, No. 5. (4 February 1994), pp. 1501-1531.
    by A Krogh, M Brown, IS Mian, K Sjölander, D Haussler
    posted to domain hmm sequence by cjeans on 2007-11-08 07:56:33 as ** along with 2 people wenhan rabio
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