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dandaman library [199 articles]

Статьи, недавно добавленные в библиотеку dandaman .
  • The age of the earliest club mosses: the Silurian Baragwanathia flora in Victoria, Australia
    Geological Magazine, Vol. 137, No. 2. (1 March 2000), pp. 207-209.
    by RB Rickards
    posted to fossil_record by dandaman on 2008-07-24 15:38:11 as ** along with 1 person ms609
  • THE EARLIEST VASCULAR PLANT OR A LATER ROOTING SYSTEM? PINNATIRAMOSUS QIANENSIS FROM THE MARINE LOWER SILURIAN XIUSHAN FORMATION, GUIZHOU PROVINCE, CHINA
    Palaios, Vol. 22, No. 2. (1 March 2007), pp. 155-165.
    by Dianne Edwards, WANG Yi, Michael G Bassett, Li CHENG Sen
    posted to fossil_record by dandaman on 2008-07-24 15:35:26 as **
  • Morphologically complex plant macrofossils from the Late Silurian of Arctic Canada
    Am. J. Bot., Vol. 89, No. 6. (1 June 2002), pp. 1004-1013.
    by Michele E Kotyk, James F Basinger, Patricia G Gensel, Tim A de Freitas
    posted to fossil_record by dandaman on 2008-07-24 15:32:15 as **
  • Genetic diversity of Nostoc symbionts endophytically associated with two bryophyte species.
    Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4393-4396.
    by JL Costa, P Paulsrud, J Rikkinen, P Lindblad
    posted to symbiosis liverworts hornworts bryophyte by dandaman on 2008-07-22 16:42:28 as **
  • Nested Containment List (NCList): A new algorithm for accelerating interval query of genome alignment and interval databases
    Bioinformatics (18 January 2007), btl647.
    by Alexander V Alekseyenko, Christopher J Lee
    posted to data_structures databases algorithms by dandaman on 2008-07-22 14:27:45 as **
  • Pseudoallelism and gene evolution.
    Cold Spring Harbor symposia on quantitative biology, Vol. 16 (1951), pp. 159-174.
    by EB LEWIS
    posted to pseudoalleles by dandaman on 2008-07-10 10:05:49 as **
  • E. B. Lewis and the Bithorax Complex: Part I
    Genetics, Vol. 160, No. 4. (1 April 2002), pp. 1265-1272.
    by Ian Duncan, Geoffrey Montgomery
    posted to pseudoalleles by dandaman on 2008-07-10 07:09:02 as **
  • Earth's oldest liverworts--Metzgeriothallus sharonae sp. nov. from the Middle Devonian (Givetian) of eastern New York, USA
    Review of Palaeobotany and Palynology, Vol. In Press, Accepted Manuscript
    by Van Aller, Ed Landing, Kenneth E Bartowski
    posted to liverworts fossil_record evolution by dandaman on 2008-07-02 10:29:49 as **
  • Common Sequence Polymorphisms Shaping Genetic Diversity in Arabidopsis thaliana
    Science, Vol. 317, No. 5836. (20 July 2007), pp. 338-342.
    by Richard M Clark, Gabriele Schweikert, Christopher Toomajian, Stephan Ossowski, Georg Zeller, Paul Shinn, Norman Warthmann, Tina T Hu, Glenn Fu, David A Hinds, Huaming Chen, Kelly A Frazer, Daniel H Huson, Bernhard Scholkopf, Magnus Nordborg, Gunnar Ratsch, Joseph R Ecker, Detlef Weigel
    posted to variation population_genomics by dandaman on 2008-07-01 13:20:37 as ** along with 3 people and 1 group xwbcn sstoma braingrind VirtualPlants
  • The biology of bryophytes--bryophytes aren't just small tracheophytes
    Am. J. Bot., Vol. 88, No. 11. (1 November 2001), pp. 2129-2131.
    by Brent D Mishler
    posted to moss evolution bryophyte by dandaman on 2008-06-29 18:35:10 as **
  • Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins.
    Plant Cell, Vol. 16, No. 1. (January 2004), pp. 241-256.
    by JL Heazlewood, JS Tonti-Filippini, AM Gout, DA Day, J Whelan, AH Millar
    posted to targeting by dandaman on 2008-06-20 11:41:17 as **
  • Sorting Signals, N-Terminal Modifications and Abundance of the Chloroplast Proteome
    PLoS ONE, Vol. 3, No. 4. (23 April 2008), e1994.
    by Boris Zybailov, Heidi Rutschow, Giulia Friso, Andrea Rudella, Olof Emanuelsson, Qi Sun, Klaas J van Wijk
    posted to targeting plastid by dandaman on 2008-06-20 11:32:41 as **
  • Phylogenomics reveals a new 'megagroup' including most photosynthetic eukaryotes.
    Biology letters (3 June 2008)
    by Fabien Burki, Kamran Shalchian-Tabrizi, Jan Pawlowski
    posted to plastid_evolution planta evolution by dandaman on 2008-06-19 08:11:10 as **
  • Reconstructing evolution: gene transfer from plastids to the nucleus.
    BioEssays : news and reviews in molecular, cellular and developmental biology, Vol. 30, No. 6. (June 2008), pp. 556-566.
    by R Bock, JN Timmis
    posted to plastid_evolution endosymbiosis egt by dandaman on 2008-06-19 08:10:23 as **
  • Chlamydiae has contributed at least 55 genes to Plantae with predominantly plastid functions.
    PLoS ONE, Vol. 3, No. 5. (2008)
    by A Moustafa, A Reyes-Prieto, D Bhattacharya
    posted to plastid_evolution endosymbiosis by dandaman on 2008-06-19 08:09:36 as ** along with 1 person ahmedmoustafa
  • The origin of plastids.
    Philosophical transactions of the Royal Society of London. Series B, Biological sciences (9 May 2008)
    by C J J Howe, A C C Barbrook, R E R E Nisbet, P J J Lockhart, A W D W Larkum
    posted to plastid_evolution endosymbiosis by dandaman on 2008-06-19 08:07:52 as **
  • Phylogeny of plastids based on cladistic analysis of gene loss inferred from complete plastid genome sequences.
    Journal of molecular evolution, Vol. 57, No. 4. (October 2003), pp. 377-382.
    by H Nozaki, N Ohta, M Matsuzaki, O Misumi, T Kuroiwa
    posted to plastid_evolution monophyly by dandaman on 2008-06-18 10:13:07 as **
  • Contribution of genosystematics to current concepts of phylogeny and classification of bryophytes.
    Biochemistry. Biokhimii͡a, Vol. 72, No. 12. (December 2007), pp. 1368-1376.
    by AV Troitsky, MS Ignatov, VK Bobrova, IA Milyutina
    posted to moss bryophyte by dandaman on 2008-06-13 17:11:09 as **
  • Paleontological Evidence to Date the Tree of Life
    Mol Biol Evol, Vol. 24, No. 1. (1 January 2007), pp. 26-53.
    by Michael J Benton, Philip C Donoghue
    posted to paleontology molecular_clock fossil_record dating by dandaman on 2008-06-11 16:50:30 as ** along with 5 people smbe2008 aprasad Archaeogenetics akifumi maximilianh
  • Large-scale statistical analyses of rice ESTs reveal correlated patterns of gene expression.
    Genome Res, Vol. 9, No. 10. (October 1999), pp. 950-959.
    by RM Ewing, A Ben Kahla, O Poirot, F Lopez, S Audic, JM Claverie
    posted to methods expression est by dandaman on 2008-05-28 07:45:07 as ** along with 1 person cjeans
  • Devonian Fungi: Interactions with the Green Alga Palaeonitella
    Mycologia, Vol. 84, No. 6. (1992), pp. 901-910.
    by Thomas N Taylor, Hagen Hass, Winfried Remy
    posted to mycorrhiza charophyceae algae by dandaman on 2008-05-26 17:18:54 as **
  • Fungi from the Rhynie chert: a view from the dark side
    Transactions: Earth Sciences (December 2004), pp. 457-473.
    by TN Taylor, SD Klavins, M Krings, EL Taylor, H Kerp, H Hass
    posted to mycorrhiza evolution by dandaman on 2008-05-26 16:48:07 as **
  • The closest living relatives of land plants.
    Science (New York, N.Y.), Vol. 294, No. 5550. (14 December 2001), pp. 2351-2353.
    by KG Karol, RM McCourt, MT Cimino, CF Delwiche
    posted to charophyceae algae by dandaman on 2008-05-26 15:32:06 as **
  • Ribosomal ITS sequences and plant phylogenetic inference
    Molecular Phylogenetics and Evolution, Vol. 29, No. 3. (December 2003), pp. 417-434.
    by I Alvarez, JF Wendel
    posted to phylogenetic_methods its concerted_evolution by dandaman on 2008-05-22 09:54:31 as ** along with 2 people and 3 groups kehan echinotrix biodiversity_conservation Bioinformatics GrassBase
  • Are Combined Analyses Better Than Single Gene Phylogenies? A Case Study Using SSU rDNA and rbcL Sequence Comparisons in the Zygnematophyceae (Streptophyta)
    Mol Biol Evol, Vol. 21, No. 3. (1 March 2004), pp. 612-624.
    by Andrey A Gontcharov, Birger Marin, Michael Melkonian
    posted to phylogenetic_methods algae by dandaman on 2008-05-22 09:45:33 as **
  • Genome evolution in polyploids.
    Plant Mol Biol, Vol. 42, No. 1. (January 2000), pp. 225-249.
    by JF Wendel
    posted to polypoidy genome_evolution by dandaman on 2008-05-15 14:34:25 as ** along with 2 people echinotrix timflutre
  • Phylogenomics of plant genomes: a methodology for genome-wide searches for orthologs in plants
    BMC Genomics, Vol. 9 (21 April 2008), 183.
    by Matthieu G Conte, Sylvain Gaillard, Gaetan Droc, Christophe Perin
    posted to software phylogeny_pipeline ortholog_prediction by dandaman on 2008-05-15 14:11:04 as ** along with 1 person kengg
  • Different pathways of homologous recombination are used for the repair of double-strand breaks within tandemly arranged sequences in the plant genome
    The Plant Journal, Vol. 35, No. 5. (2003), pp. 604-612.
    by Nadiya Orel, Anzhela Kyryk, Holger Puchta
    posted to gene_conversion dsb_repair concerted_evolution by dandaman on 2008-05-15 10:17:40 as **
  • Efficient repair of genomic double-strand breaks by homologous recombination between directly repeated sequences in the plant genome.
    The Plant cell, Vol. 14, No. 5. (May 2002), pp. 1121-1131.
    by R Siebert, H Puchta
    posted to gene_conversion dsb_repair by dandaman on 2008-05-15 10:11:03 as **
  • Molecular evolution of the small subunit of ribulose bisphosphate carboxylase: nucleotide substitution and gene conversion.
    Genetics, Vol. 123, No. 4. (December 1989), pp. 845-863.
    by RB Meagher, S Berry-Lowe, K Rice
    posted to gene_conversion concerted_evolution by dandaman on 2008-05-15 09:53:52 as **
  • Sister chromatid gene conversion is a prominent double-strand break repair pathway in mammalian cells.
    The EMBO journal, Vol. 19, No. 13. (3 July 2000), pp. 3398-3407.
    by RD Johnson, M Jasin
    posted to gene_conversion by dandaman on 2008-05-15 09:50:15 as **
  • The effect of gene conversion on the divergence between duplicated genes.
    Genetics, Vol. 166, No. 3. (March 2004), pp. 1553-1560.
    by KM Teshima, H Innan
    posted to gene_evolution gene_conversion by dandaman on 2008-05-15 09:30:39 as **
  • Gene conversion in the rice genome
    BMC Genomics, Vol. 9 (25 February 2008), 93.
    by Shuqing Xu, Terry Clark, Hongkun Zheng, Soren Vang, Ruiqiang Li, Gane KS Wong, Jun Wang, Xiaoguang Zheng
    posted to gene_evolution gene_conversion by dandaman on 2008-05-15 08:57:42 as **
  • Nonadditive expression and parent-of-origin effects identified by microarray and allele-specific expression profiling of maize endosperm.
    Plant Physiol, Vol. 145, No. 2. (October 2007), pp. 411-425.
    by RM Stupar, PJ Hermanson, NM Springer
    posted to allelic_expression by dandaman on 2008-05-15 08:53:49 as ** along with 2 people echinotrix rschulz
  • Evolution of Duplicate Gene Expression in Polyploid and Hybrid Plants
    J Hered, Vol. 98, No. 2. (1 March 2007), pp. 136-141.
    by Keith L Adams
    posted to wgd genome_duplication gene_evolution gene_dosage expression by dandaman on 2008-05-15 08:33:21 as ** along with 5 people and 1 group balicea cmm echinotrix TaqSys natstreet FAB-lab
  • How to usefully compare homologous plant genes and chromosomes as DNA sequences
    The Plant Journal, Vol. 53, No. 4. (February 2008), pp. 661-673.
    by Lyons, Eric, Freeling, Michael
    posted to synteny syntenic_blocks software by dandaman on 2008-05-12 18:53:05 as ** along with 2 people kengg natstreet
  • Convergent evolution of shoots in land plants: lack of auxin polar transport in moss shoots
    Evolution & Development, Vol. 10, No. 2. (April 2008), pp. 176-186.
    by Fujita, Tomomichi, Sakaguchi, Hisako, Hiwatashi, Yuji, Wagstaff, J Steven, Ito, Motomi, Deguchi, Hironori, Sato, Toshiyuki, Hasebe, Mitsuyasu
    posted to bryophyte_evolution bryophyte auxin by dandaman on 2008-05-09 16:03:21 as **
  • Dissection of the light signal transduction pathways regulating the two early light-induced protein genes in Arabidopsis.
    Plant physiology, Vol. 127, No. 3. (November 2001), pp. 986-997.
    by O Harari-Steinberg, I Ohad, DA Chamovitz
    posted to lhcps lhcp lhc elips by dandaman on 2008-05-07 13:04:12 as **
  • Plants lacking the main light-harvesting complex retain photosystem II macro-organization
    Nature, Vol. 421, No. 6923. (6 February 2003), pp. 648-652.
    by AV Ruban, M Wentworth, AE Yakushevska, J Andersson, PJ Lee, W Keegstra, JP Dekker, EJ Boekema, S Jansson, P Horton
    posted to lhcps lhcp lhcb5 lhc by dandaman on 2008-05-06 18:53:39 as **
  • Mechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5 [angst] resolution
    The EMBO Journal, Vol. aop, No. current. (17 February 2005)
    by Jorg Standfuss, ACTv Anke, Matteo Lamborghini, Werner Kuhlbrandt
    posted to lhcps lhcp lhc by dandaman on 2008-05-06 17:28:11 as ** along with 1 person and 2 groups jwm Radiation_Damage Stressosome
  • A look within LHCII: differential analysis of the Lhcb1-3 complexes building the major trimeric antenna complex of higher-plant photosynthesis.
    Biochemistry, Vol. 43, No. 29. (27 July 2004), pp. 9467-9476.
    by S Caffarri, R Croce, L Cattivelli, R Bassi
    posted to lhcps lhcp lhc by dandaman on 2008-05-06 16:46:45 as **
  • EVOLUTION: Tracing Oxygen's Imprint on Earth's Metabolic Evolution
    Science, Vol. 311, No. 5768. (24 March 2006), pp. 1724-1725.
    by Paul G Falkowski
    posted to oxygen land_transition evolution by dandaman on 2008-05-05 22:20:37 as **
  • In silico and biochemical analysis of Physcomitrella patens photosynthetic antenna: identification of subunits which evolved upon land adaptation.
    PLoS ONE, Vol. 3, No. 4. (2008)
    by A Alboresi, S Caffarri, F Nogue, R Bassi, T Morosinotto
    posted to lhcps lhcp lhc by dandaman on 2008-05-05 20:28:38 as **
  • Photosynthetic acclimation: Structural reorganisation of light harvesting antenna role of redox-dependent phosphorylation of major and minor chlorophyll a/b binding proteins
    FEBS Journal, Vol. 275, No. 6. (March 2008), pp. 1056-1068.
    by Kargul, Joanna, Barber, James
    posted to lhcps lhcp lhc by dandaman on 2008-05-01 11:16:06 as **
  • Identification of the mobile light-harvesting complex II polypeptides for state transitions in Chlamydomonas reinhardtii.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 103, No. 2. (10 January 2006), pp. 477-482.
    by H Takahashi, M Iwai, Y Takahashi, J Minagawa
    posted to lhcps lhcp lhc by dandaman on 2008-04-30 13:24:07 as **
  • Light-induced short-term adaptation mechanisms under redox control in the PS II-LHCII supercomplex: LHC II state transitions and PS II repair cycle
    Naturwissenschaften, Vol. 88, No. 7. (1 July 2001), pp. 284-292.
    by Olaf Kruse
    posted to lhcps lhcp lhc by dandaman on 2008-04-30 10:41:34 as **
  • Lil3 assembles as chlorophyll-binding protein complex during deetiolation.
    FEBS letters, Vol. 582, No. 10. (30 April 2008), pp. 1547-1551.
    by V Reisinger, M Plöscher, LA Eichacker
    posted to lhcps elips by dandaman on 2008-04-29 16:16:08 as **
  • Let Me Count the Ways: Mechanisms of Gene Regulation by miRNAs and siRNAs
    Molecular Cell, Vol. 29, No. 1. (18 January 2008), pp. 1-7.
    by Ligang Wu, Joel G Belasco
    posted to small_rnas sirna ptgs mirna by dandaman on 2008-04-25 09:28:10 as ** along with 4 people and 1 group maralena heliopais neha_sarode lambda microRNA
  • A microRNA as a translational repressor of APETALA2 in Arabidopsis flower development.
    Science, Vol. 303, No. 5666. (26 March 2004), pp. 2022-2025.
    by X Chen
    posted to translation_inhibition small_rnas ptgs mirna by dandaman on 2008-04-25 09:19:02 as ** along with 1 person imouthesmp
  • Protein secondary structure prediction based on position-specific scoring matrices.
    J Mol Biol, Vol. 292, No. 2. (17 September 1999), pp. 195-202.
    by DT Jones
    posted to secondary_structure prediction by dandaman on 2008-04-24 17:30:53 as ** along with 8 people saunders chad_davis wouterboomsma j3xucite dgront leelarcombe rabio rph
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