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eckart_bindewald microrna [78 articles]

Recent papers added to eckart_bindewald library classified by the tag microrna. You can also see everyone's microrna.
  • Evolution of microRNAs and their targets: Are all microRNAs biologically relevant?
    Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. In Press, Uncorrected Proof
    by Michael J Axtell
    posted to evolution function microrna target by eckart_bindewald on 2008-03-19 15:38:26 as *** along with 2 people and 1 group maralena stajich Berkeley Mycology
  • GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay.
    Nat Struct Mol Biol (16 March 2008)
    by Ana Eulalio, Eric Huntzinger, Elisa Izaurralde
    posted to argonaute decay eif4e microrna repression translation by eckart_bindewald on 2008-03-19 15:37:27 as **
  • Predicting expression patterns from regulatory sequence in Drosophila segmentation
    Nature (02 January 2008)
    by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul
    posted to expression gene microrna prediction profile promoter by eckart_bindewald on 2008-03-13 15:34:23 as ***** along with 12 people siebert tresch tmmurali djkt bootsy biomcgary idonaldson roys emptyhb pkharchenko meiklej jrest
  • Computational Modeling of Post-Transcriptional Gene Regulation by MicroRNAs.
    J Comput Biol (11 March 2008)
    by Raya Khanin, Veronica Vinciotti
    posted to kinetics microrna by eckart_bindewald on 2008-03-13 14:58:10 as ** along with 5 people and 1 group heliopais jyuh bootsy jfr maralena microRNA
  • Detection of a MicroRNA Signal in an In Vivo Expression Set of mRNAs.
    PLoS ONE, Vol. 2, No. 8. (2007)
    by T Liu, T Papagiannakopoulos, K Puskar, S Qi, F Santiago, W Clay, K Lao, Y Lee, SF Nelson, HI Kornblum, F Doyle, L Petzold, B Shraiman, KS Kosik
    posted to correlation microrna mrna by eckart_bindewald on 2008-03-06 15:33:35 as **** along with 1 person and 1 group andersbj microRNA
  • Members of the miRNA-200 family regulate olfactory neurogenesis.
    Neuron, Vol. 57, No. 1. (10 January 2008), pp. 41-55.
    by PS Choi, L Zakhary, WY Choi, S Caron, E Alvarez-Saavedra, EA Miska, M McManus, B Harfe, AJ Giraldez, RH Horvitz, AF Schier, C Dulac
    posted to expression microrna neural olfactory tissue by eckart_bindewald on 2008-03-06 13:11:11 as **** along with 2 people and 1 group heliopais maralena microRNA
  • Morphogenesis in skin is governed by discrete sets of differentially expressed microRNAs
    Nature Genetics, Vol. 38, No. 3. (05 February 2006), pp. 356-362.
    by Rui Yi, Dónal O'Carroll, Hilda A Pasolli, Zhihong Zhang, Fred S Dietrich, Alexander Tarakhovsky, Elaine Fuchs
    posted to expression microrna profile skin by eckart_bindewald on 2008-03-06 13:08:54 as *** along with 3 people pcahan1 tardigrade panetebrother
  • A skin microRNA promotes differentiation by repressing ‘stemness’
    Nature (02 March 2008)
    by Rui Yi, Matthew N Poy, Markus Stoffel, Elaine Fuchs
    posted to expression function microrna protein skin by eckart_bindewald on 2008-03-06 13:07:58 as ***** along with 5 people and 1 group heliopais hplatero Alexander_Kanitz maralena snowcrash microRNA
  • Computational analysis of biological functions and pathways collectively targeted by co-expressed microRNAs in cancer
    BMC Bioinformatics, Vol. 8, No. Suppl 7. (2007)
    by Yuriy Gusev, Thomas Schmittgen, Megan Lerner, Russell Postier, Daniel Brackett
    posted to analysis cancer function microrna pathway prediction protein by eckart_bindewald on 2008-03-03 16:07:17 as *** along with 5 people jfr ealloza vinithepooh yugusev maralena
  • MicroRNA-21 targets tumor suppressor genes in invasion and metastasis.
    Cell Res (12 February 2008)
    by Shuomin Zhu, Hailong Wu, Fangting Wu, Daotai Nie, Shijie Sheng, Yin-Yuan Y Mo
    posted to cancer microrna by eckart_bindewald on 2008-02-15 13:06:01 as *** along with 1 person maralena
  • The Roles of MicroRNAs in Vertebrate Physiology and Human Disease.
    Annu Rev Genomics Hum Genet (14 August 2006)
    by Tsung-Cheng C Chang, Joshua T T Mendell
    posted to cancer microrna review by eckart_bindewald on 2007-12-11 20:53:23 as read along with 1 person and 1 group jyuh Bioinformatics
  • Inter- and intra-combinatorial regulation by transcription factors and microRNAs
    BMC Genomics, Vol. 8 (30 October 2007), 396.
    by Yiming Zhou, John Ferguson, Joseph T Chang, Yuval Kluger
    posted to interactions microrna network regulation transcription by eckart_bindewald on 2007-11-04 12:19:53 as **** along with 5 people and 1 group hpaces heliopais jfr bootsy maralena microRNA
  • MicroRNA-21 (miR-21) post-transcriptionally downregulates tumor suppressor Pdcd4 and stimulates invasion, intravasation and metastasis in colorectal cancer
    Oncogene, Vol. aop, No. current.
    by IA Asangani, SAK Rasheed, DA Nikolova, JH Leupold, NH Colburn, S Post, H Allgayer
    posted to cancer microrna pdcd4 tumor by eckart_bindewald on 2007-11-01 04:11:28 as *** along with 2 people maralena sandrapineau
  • Distinctive patterns of microRNA expression in primary muscular disorders.
    Proc Natl Acad Sci U S A (17 October 2007)
    by Iris Eisenberg, Alal Eran, Ichizo Nishino, Maurizio Moggio, Costanza Lamperti, Anthony A A Amato, Hart G G Lidov, Peter B B Kang, Kathryn N N North, Stella Mitrani-Rosenbaum, Kevin M M Flanigan, Lori A A Neely, Duncan Whitney, Alan H H Beggs, Isaac S S Kohane, Louis M M Kunkel
    posted to disorder expression microarray microrna muscular by eckart_bindewald on 2007-10-19 20:56:51 as *** along with 1 person balicea
  • MicroRNA silencing through RISC recruitment of eIF6
    Nature (16 May 2007)
    by Thimmaiah P Chendrimada, Kenneth J Finn, Xinjun Ji, David Baillat, Richard I Gregory, Stephen A Liebhaber, Amy E Pasquinelli, Ramin Shiekhattar
    posted to microrna ribosome risc translation translation_initiation by eckart_bindewald on 2007-10-09 15:59:24 as **** along with 2 people tardigrade saru
  • Classifying microRNAs in cancer: The good, the bad and the ugly.
    Biochim Biophys Acta (22 November 2006)
    by P Mathijs M Voorhoeve, Reuven Agami
    posted to cancer microrna by eckart_bindewald on 2006-12-27 16:46:30 as **** along with 1 person tardigrade
  • MicroRNA and cancer: Current status and prospective.
    Int J Cancer (12 December 2006)
    by Wei Wu, Miao Sun, Gang-Ming M Zou, Jianjun Chen
    posted to cancer microrna by eckart_bindewald on 2006-12-15 11:43:07 as *** along with 4 people giovenko jyuh jfr Garamonfok
  • MicroRNAs preferentially target the genes with high transcriptional regulation complexity.
    Biochem Biophys Res Commun (27 November 2006)
    by Qinghua Cui, Zhenbao Yu, Youlian Pan, Enrico O O Purisima, Edwin Wang
    posted to microrna transcription translation translation_initiation by eckart_bindewald on 2006-12-06 12:21:53 as ** along with 7 people and 5 groups natstreet tardigrade dchughes cdawson cursonivel1 heliopais maralena microRNA G4ID GIG Genetics-of-Gambling cursonivel1
  • Computational identification of microRNAs and their targets.
    Comput Biol Chem (21 November 2006)
    by Baohong Zhang, Xiaoping Pan, Qinglian Wang, George P P Cobb, Todd A A Anderson
    posted to microrna prediction target by eckart_bindewald on 2006-11-27 17:07:05 as *** along with 5 people and 2 groups jfr tardigrade cdawson GustavoLacerda heliopais microRNA GIG
  • MicroRNAs 143 and 145 are possible common onco-microRNAs in human cancers.
    Oncol Rep, Vol. 16, No. 4. (October 2006), pp. 845-850.
    by Y Akao, Y Nakagawa, T Naoe
    posted to cancer microrna by eckart_bindewald on 2006-09-15 13:10:08 as ** along with 1 person maralena
  • MOLECULAR BIOLOGY: A New RNA Dimension to Genome Control.
    Science, Vol. 313, No. 5785. (21 July 2006), pp. 305-306.
    by RW Carthew
    posted to microrna pirna by eckart_bindewald on 2006-07-24 14:26:09 as **** along with 7 people and 4 groups dayjm marcius tardigrade dchughes mtagaya jackjackjjj nicg G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • microRNAs exhibit high frequency genomic alterations in human cancer.
    Proc Natl Acad Sci U S A (5 June 2006)
    by Lin Zhang, Jia Huang, Nuo Yang, Joel Greshock, Molly S S Megraw, Antonis Giannakakis, Shun Liang, Tara L L Naylor, Andrea Barchetti, Michelle R R Ward, George Yao, Angelica Medina, Ann O'brien-Jenkins, Dionyssios Katsaros, Artemis Hatzigeorgiou, Phyllis A A Gimotty, Barbara L L Weber, George Coukos
    posted to cancer microrna by eckart_bindewald on 2006-06-07 17:22:15 as *** along with 6 people and 2 groups jfr maralena mtagaya cmm ealloza Garamonfok FAB-lab BioinfoCIPF
  • Oncomirs — microRNAs with a role in cancer
    Nature Reviews Cancer, Vol. 6, No. 4., pp. 259-269.
    by Aurora Esquela-Kerscher, Frank J Slack
    posted to cancer microrna by eckart_bindewald on 2006-04-24 20:44:59 as ***** along with 7 people and 6 groups jfr jyuh marcius xico dchughes cdawson ealloza WetBiology G4ID BioinfoCIPF SGU-CIPF GIG Genetics-of-Gambling
  • Identification and Classification of Conserved RNA Secondary Structures in the Human Genome.
    PLoS Comput Biol, Vol. 2, No. 4. (21 April 2006)
    by Jakob Skou S Pedersen, Gill Bejerano, Adam Siepel, Kate Rosenbloom, Kerstin Lindblad-Toh, Eric S S Lander, Jim Kent, Webb Miller, David Haussler
    posted to genome human microrna noncoding prediction rna by eckart_bindewald on 2006-04-24 16:27:41 as ***** along with 11 people and 2 groups hpaces marcius tardigrade arcticrasta tabu mtagaya Eonwe ilh djkt raylim tale BioinfoCIPF SGU-CIPF
  • The evolving role of microRNAs in animal gene expression.
    Bioessays, Vol. 28, No. 5. (13 April 2006), pp. 449-452.
    by Katlin B B Massirer, Amy E E Pasquinelli
    posted to microrna by eckart_bindewald on 2006-04-17 18:25:20 as *** along with 4 people and 4 groups marcius tardigrade balicea dchughes G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Characterization of 43 non-protein coding mRNA genes in Arabidopsis including the MIR162a-derived transcripts.
    Plant Physiol (24 February 2006)
    by Judith Hirsch, Vincent Lefort, Marion Vankersschaver, Adnane Boualem, Antoine Lucas, Claude Thermes, Yves d'Aubenton-Carafa, Martin Crespi
    posted to microrna noncoding rna by eckart_bindewald on 2006-04-12 18:34:27 as *** along with 3 people and 2 groups tardigrade andersbj cdawson microRNA GIG
  • Analysis of a new homozygous deletion in the tumor suppressor region at 3p12.3 reveals two novel intronic noncoding RNA genes.
    Genes Chromosomes Cancer (10 April 2006)
    by Debora Angeloni, Arja Ter Elst, Ming Hui H Wei, Anneke Y Y van der Veen, Eleonora A A Braga, Eugene A A Klimov, Tineke Timmer, Luba Korobeinikova, Michael I I Lerman, Charles H C M H Buys
    posted to cancer microrna noncoding rna by eckart_bindewald on 2006-04-12 18:31:04 as ****
  • RNA editing of human microRNAs.
    Genome Biol, Vol. 7, No. 4. (4 April 2006)
    by Matthew J Blow, Russell J Grocock, Stijn van Dongen, Anton J Enright, Ed Dicks, P Andrew A Futreal, Richard Wooster, Michael R Stratton
    posted to editing human microrna by eckart_bindewald on 2006-04-11 17:50:25 as *** along with 3 people and 3 groups marcius andersbj scroft microRNA BioinfoCIPF SGU-CIPF
  • Design of siRNAs producing unstructured guide-RNAs results in improved RNA interference efficiency
    Nature Biotechnology, Vol. 23, No. 11. (30 October 2005), pp. 1440-1444.
    by Volker Patzel, Sascha Rutz, Isabell Dietrich, Christian Köberle, Alexander Scheffold, Stefan HE Kaufmann
    posted to microrna risc sirna by eckart_bindewald on 2006-04-11 17:46:25 as **** along with 2 people and 1 group andersbj mtagaya microRNA
  • A comparison of RNA folding measures.
    BMC Bioinformatics, Vol. 6, No. 1. (3 October 2005)
    by Eva Freyhult, Paul P Gardner, Vincent Moulton
    posted to microrna noncoding by eckart_bindewald on 2006-03-17 14:44:47 as **** along with 5 people and 4 groups imouthesmp marcius mtagaya bsmagic Kiarostami Bioinformatics BioinfoCIPF bioinplant SGU-CIPF
  • Mammalian microRNAs: a small world for fine-tuning gene expression.
    Mamm Genome, Vol. 17, No. 3. (March 2006), pp. 189-202.
    by C Sevignani, GA Calin, LD Siracusa, CM Croce
    posted to microrna review by eckart_bindewald on 2006-03-17 14:41:29 as *** along with 3 people and 4 groups andersbj dchughes ealloza microRNA G4ID BioinfoCIPF Genetics-of-Gambling
  • A combined computational and microarray-based approach identifies novel microRNAs encoded by human gamma-herpesviruses.
    RNA (15 March 2006)
    by Adam Grundhoff, Christopher S S Sullivan, Don Ganem
    posted to microrna prediction by eckart_bindewald on 2006-03-17 14:38:44 as **** along with 3 people and 1 group andersbj mtagaya damiantrj microRNA
  • Evidence that miRNAs are different from other RNAs.
    Cell Mol Life Sci, Vol. 63, No. 2. (January 2006), pp. 246-254.
    by BH Zhang, XP Pan, SB Cox, GP Cobb, TA Anderson
    posted to microrna prediction by eckart_bindewald on 2006-03-17 14:37:24 as ** along with 4 people and 6 groups marcius andersbj dchughes cdawson microRNA G4ID BioinfoCIPF SGU-CIPF GIG Genetics-of-Gambling
  • Virus-encoded microRNAs: novel regulators of gene expression.
    Trends Microbiol (10 March 2006)
    by Venugopal Nair, Mihaela Zavolan
    posted to microrna virus by eckart_bindewald on 2006-03-16 14:03:31 as read
  • Regulating mammalian transcription with RNA.
    Trends Biochem Sci, Vol. 30, No. 12. (December 2005), pp. 655-658.
    by DR Corey
    posted to microrna review by eckart_bindewald on 2006-03-03 18:19:55 as ** along with 2 people and 2 groups balicea dchughes G4ID Genetics-of-Gambling
  • Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function
    Trends in Genetics, Vol. 22, No. 1. (January 2006), pp. 1-5.
    by Ken C Pang, Martin C Frith, John S Mattick
    posted to genome microrna by eckart_bindewald on 2006-03-03 18:18:40 as ** along with 6 people and 5 groups cassj marcius alexg andersbj dchughes mtagaya microRNA G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Gene regulation by microRNAs.
    Curr Opin Genet Dev (23 February 2006)
    by Richard W W Carthew
    posted to microrna review by eckart_bindewald on 2006-03-01 19:03:22 as ** along with 9 people and 4 groups marcius tardigrade rodrigo dchughes mtagaya balabu cdawson noano heliopais microRNA BioinfoCIPF SGU-CIPF GIG
  • The colorectal microRNAome.
    Proc Natl Acad Sci U S A (27 February 2006)
    by Jordan M M Cummins, Yiping He, Rebecca J J Leary, Ray Pagliarini, Luis A A Diaz, Tobias Sjoblom, Omer Barad, Zvi Bentwich, Anna E E Szafranska, Emmanuel Labourier, Christopher K K Raymond, Brian S S Roberts, Hartmut Juhl, Kenneth W W Kinzler, Bert Vogelstein, Victor E E Velculescu
    posted to genome human microrna by eckart_bindewald on 2006-03-01 19:02:37 as **** along with 6 people and 3 groups jyuh jfr marcius andersbj mtagaya cpnP microRNA BioinfoCIPF SGU-CIPF
  • MicroRNAs direct rapid deadenylation of mRNA.
    Proc Natl Acad Sci U S A (22 February 2006)
    by Ligang Wu, Jihua Fan, Joel G G Belasco
    posted to microrna by eckart_bindewald on 2006-02-24 22:14:32 as ** along with 4 people and 3 groups andersbj dchughes mtagaya heliopais microRNA G4ID Genetics-of-Gambling
  • A novel function for a micro RNA: Negative regulators can do positive for the hepatitis C virus.
    Hepatology, Vol. 43, No. 3. (22 February 2006), pp. 612-615.
    by Nicole Appel, Ralf Bartenschlager
    posted to microrna virus by eckart_bindewald on 2006-02-24 22:13:31 as *** along with 1 person and 1 group andersbj microRNA
  • Cell-type-specific signatures of microRNAs on target mRNA expression.
    Proc Natl Acad Sci U S A (13 February 2006)
    by Pranidhi Sood, Azra Krek, Mihaela Zavolan, Giuseppe Macino, Nikolaus Rajewsky
    posted to microrna prediction rna target by eckart_bindewald on 2006-02-16 14:14:27 as ** along with 7 people and 3 groups jyuh jfr andersbj dchughes mtagaya lp2 heliopais microRNA G4ID Genetics-of-Gambling
  • Computational models with thermodynamic and composition features improve siRNA design.
    BMC Bioinformatics, Vol. 7, No. 1. (12 February 2006)
    by Svetlana A Shabalina, Alexey N Spiridonov, Aleksey Y Ogurtsov
    posted to genome microrna prediction by eckart_bindewald on 2006-02-15 16:34:59 as ****
  • Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome
    Nature Biotechnology, Vol. 23, No. 11. (04 November 2005), pp. 1383-1390.
    by Stefan Washietl, Ivo L Hofacker, Melanie Lukasser, Alexander Hüttenhofer, Peter F Stadler
    posted to genome microrna noncoding prediction rna by eckart_bindewald on 2006-02-08 19:20:39 as read along with 6 people and 3 groups marcius tardigrade tabu cdawson ilh raylim BioinfoCIPF SGU-CIPF GIG
  • Identification of clustered microRNAs using an ab initio prediction method.
    BMC Bioinformatics, Vol. 6, No. 1. (7 November 2005)
    by Alain Sewer, Nicodeme Paul, Pablo Landgraf, Alexei Aravin, Sebastien Pfeffer, Michael J Brownstein, Thomas Tuschl, Erik van Nimwegen, Mihaela Zavolan
    posted to microrna prediction by eckart_bindewald on 2006-02-06 12:36:46 as **** along with 1 person mtagaya
  • miRBase: microRNA sequences, targets and gene nomenclature.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by S Griffiths-Jones, RJ Grocock, S van Dongen, A Bateman, AJ Enright
    posted to database microrna by eckart_bindewald on 2006-02-06 12:31:59 as *** along with 8 people and 3 groups marcius tardigrade cdawson ealloza Garamonfok natstreet maralena elfar BioinfoCIPF SGU-CIPF GIG
  • Genomics of microRNA.
    Trends Genet (27 January 2006)
    by V Narry N Kim, Jin-Wu W Nam
    posted to microrna prediction review rna by eckart_bindewald on 2006-02-06 12:24:10 as ***** along with 9 people and 6 groups jo_davies marcius tardigrade andersbj dchughes mtagaya stajich Garamonfok ale Bioinformatics microRNA G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Statistical Inference for Well-ordered Structures in Nucleotide Sequences.
    Proc IEEE Comput Soc Bioinform Conf, Vol. 2 (2003), pp. 190-196.
    by SY Le, JH Chen, JV Maize
    posted to microrna rna secondary structure by eckart_bindewald on 2006-02-06 12:21:43 as **
  • Non-coding RNAs: new players in eukaryotic biology.
    Gene, Vol. 357, No. 2. (12 September 2005), pp. 83-94.
    by FF Costa
    posted to microrna review by eckart_bindewald on 2006-01-23 20:40:27 as *** along with 3 people jwortman tardigrade mtagaya
  • MicroRNA identification based on sequence and structure alignment.
    Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3610-3614.
    by X Wang, J Zhang, F Li, J Gu, T He, X Zhang, Y Li
    posted to microrna prediction by eckart_bindewald on 2006-01-23 20:39:30 as **** along with 2 people and 2 groups marcius bioinfo BioinfoCIPF SGU-CIPF
  • A computational view of microRNAs and their targets.
    Drug Discov Today, Vol. 10, No. 8. (15 April 2005), pp. 595-601.
    by JR Brown, P Sanseau
    posted to microrna prediction review target by eckart_bindewald on 2006-01-23 20:20:06 as ****
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