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eckart_bindewald motif [17 articles]

Recent papers added to eckart_bindewald library classified by the tag motif. You can also see everyone's motif.
  • Combining phylogenetic data with co-regulated genes to identify regulatory motifs.
    Bioinformatics, Vol. 19, No. 18. (12 December 2003), pp. 2369-2380.
    by T Wang, GD Stormo
    posted to alignment discovery motif ortholog phylogenetic by eckart_bindewald on 2008-03-25 20:43:30 as *** along with 3 people balajis dquest natstreet
  • Fast-Find: a novel computational approach to analyzing combinatorial motifs.
    BMC Bioinformatics, Vol. 7 (2006)
    by M Hamady, E Peden, R Knight, R Singh
    posted to database motif prediction rna search by eckart_bindewald on 2007-10-26 13:30:28 as ***
  • Modeling RNA tertiary structure motifs by graph-grammars.
    Nucleic Acids Res, Vol. 35, No. 5. (2007), pp. 1726-1736.
    by K St-Onge, P Thibault, S Hamel, F Major
    posted to graph motif rna structure by eckart_bindewald on 2007-10-23 14:25:06 as *** along with 1 person debatebob
  • Discovering Motifs in Ranked Lists of DNA Sequences
    PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e39.
    by Eran Eden, Doron Lipson, Sivan Yogev, Zohar Yakhini
    posted to dna microarray motif pattern prediction rna by eckart_bindewald on 2007-10-18 12:53:32 as ***** along with 6 people isimpson zwang GeeSharpMinor ppark idonaldson hpaces
  • MotifScorer: using a compendium of microarrays to identify regulatory motifs.
    Bioinformatics (30 November 2006)
    by Matteo Brilli, Renato Fani, Pietro Lió
    posted to microarray motif regulation transcription by eckart_bindewald on 2006-12-05 12:04:33 as *** along with 2 people gpalidwor shigepong
  • Analysis of RNA motifs.
    Curr Opin Struct Biol, Vol. 13, No. 3. (June 2003), pp. 300-308.
    by NB Leontis, E Westhof
    posted to building_block motif nanotechmology rna by eckart_bindewald on 2006-11-30 12:57:52 as read along with 3 people and 2 groups marcius arcticrasta debatebob BioinfoCIPF SGU-CIPF
  • Conformational flexibility of four-way junctions in RNA.
    J Mol Biol, Vol. 336, No. 1. (6 February 2004), pp. 69-79.
    by S Hohng, TJ Wilson, E Tan, RM Clegg, DM Lilley, T Ha
    posted to building_block flexibility junction motif rna by eckart_bindewald on 2006-11-30 12:32:04 as read
  • RNA structural motifs: building blocks of a modular biomolecule.
    Q Rev Biophys, Vol. 38, No. 3. (August 2005), pp. 221-243.
    by DK Hendrix, SE Brenner, SR Holbrook
    posted to building_block motif rna by eckart_bindewald on 2006-11-29 12:07:29 as ***** along with 2 people and 2 groups marcius debatebob BioinfoCIPF SGU-CIPF
  • RNA structure: the long and the short of it.
    Curr Opin Struct Biol, Vol. 15, No. 3. (June 2005), pp. 302-308.
    by SR Holbrook
    posted to building_block motif rna by eckart_bindewald on 2006-11-29 12:03:50 as ***** along with 2 people and 2 groups marcius debatebob BioinfoCIPF SGU-CIPF
  • The building blocks and motifs of RNA architecture.
    Curr Opin Struct Biol, Vol. 16, No. 3. (June 2006), pp. 279-287.
    by NB Leontis, A Lescoute, E Westhof
    posted to junction motif rna star2 by eckart_bindewald on 2006-09-05 16:46:40 as read along with 2 people and 2 groups marcius debatebob BioinfoCIPF SGU-CIPF
  • Motif prediction in ribosomal RNAs Lessons and prospects for automated motif prediction in homologous RNA molecules.
    Biochimie, Vol. 84, No. 9. (September 2002), pp. 961-973.
    by NB Leontis, J Stombaugh, E Westhof
    posted to motif nanodesign rna by eckart_bindewald on 2006-09-05 16:45:51 as *** along with 1 person and 2 groups marcius BioinfoCIPF SGU-CIPF
  • On counting position weight matrix matches in a sequence, with application to discriminative motif finding.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by S Sinha
    posted to motif pattern prediction sequence by eckart_bindewald on 2006-08-01 12:48:00 as *** along with 2 people xili03 samal
  • Apples to apples: improving the performance of motif finders and their significance analysis in the Twilight Zone.
    Bioinformatics, Vol. 22, No. 14. (15 July 2006)
    by P Ng, N Nagarajan, N Jones, U Keich
    posted to motif pattern sequence by eckart_bindewald on 2006-08-01 12:41:18 as *** along with 2 people dquest nedwards
  • Finding motifs from all sequences with and without binding sites*
    Bioinformatics (26 July 2006)
    by Henry C M C Leung, Francis Y L Y Chin
    posted to binding motif pattern sequence site by eckart_bindewald on 2006-07-31 12:20:55 as *** along with 2 people nuin dquest
  • Phylogenetic motif detection by expectation-maximization on evolutionary mixtures.
    Pac Symp Biocomput (2004), pp. 324-335.
    by AM Moses, DY Chiang, MB Eisen
    posted to dna expectation-maximization motif prediction by eckart_bindewald on 2006-03-17 15:00:40 as **** along with 3 people wenhan dquest lusk
  • PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences.
    BMC Bioinformatics, Vol. 5 (28 October 2004)
    by S Sinha, M Blanchette, M Tompa
    posted to alignment motif prediction by eckart_bindewald on 2006-03-17 14:57:11 as read along with 4 people dquest adsmitty lusk xili03
  • A catalog of stability-associated sequence elements in 3' UTRs of yeast mRNAs.
    Genome Biol, Vol. 6, No. 10. (2005)
    by R Shalgi, M Lapidot, R Shamir, Y Pilpel
    posted to motif mrna prediction utr by eckart_bindewald on 2006-03-17 14:54:28 as ****
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