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fpattyn analysis [7 articles]

Recent papers added to fpattyn library classified by the tag analysis. You can also see everyone's analysis.
  • High-throughput single-nucleotide structural mapping by capillary automated footprinting analysis
    Nucl. Acids Res., Vol. 36, No. 11. (1 June 2008), e63.
    by Somdeb Mitra, Inna V Shcherbakova, Russ B Altman, Michael Brenowitz, Alain Laederach
    posted to footprinting analysis by fpattyn on 2008-06-24 16:28:01 as **
  • Transcription factor and microRNA motif discovery: The Amadeus platform and a compendium of metazoan target sets.
    Genome research (14 April 2008)
    by Chaim Linhart, Yonit Halperin, Ron Shamir
  • Global identification of Myc target genes reveals its direct role in mitochondrial biogenesis and its E-box usage in vivo.
    PLoS ONE, Vol. 3, No. 3. (2008)
    by J Kim, JH Lee, VR Iyer
    posted to promoter myc ebox chip analysis by fpattyn on 2008-04-28 15:41:57 as ** along with 1 group Neuroblastoma
  • Two different classes of co-occurring motif-pairs found by a novel visualization method in human promoter regions
    BMC Genomics, Vol. 9 (01 March 2008), 112.
    by Katsuhiko Murakami, Tadashi Imanishi, Takashi Gojobori, Kenta Nakai
    posted to analysis finding motif mycn promoter by fpattyn on 2008-03-12 09:42:43 as **
  • Trawler: de novo regulatory motif discovery pipeline for chromatin immunoprecipitation
    Nature Methods, Vol. 4, No. 7. (24 June 2007), pp. 563-565.
    by Laurence Ettwiller, Benedict Paten, Mirana Ramialison, Ewan Birney, Joachim Wittbrodt
  • Genome-wide analysis reveals regulatory role of G4 DNA in gene transcription
    Genome Res. (20 December 2007), gr.6905408.
    by Zhuo Du, Yiqiang Zhao, Ning Li
  • 28-Way vertebrate alignment and conservation track in the UCSC Genome Browser
    Genome Res. (5 November 2007), gr.6761107.
    by Webb Miller, Kate Rosenbloom, Ross C Hardison, Minmei Hou, James Taylor, Brian Raney, Richard Burhans, David C King, Robert Baertsch, Daniel Blankenberg, Kosakovsky, Anton Nekrutenko, Belinda Giardine, Robert S Harris, Svitlana Tyekucheva, Mark Diekhans, Thomas H Pringle, William J Murphy, Arthur Lesk, George M Weinstock, Kerstin Lindblad-Toh, Richard A Gibbs, Eric S Lander, Adam Siepel, David Haussler, James W Kent
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