MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.

by: SW Doniger, N Salomonis, KD Dahlquist, K Vranizan, SC Lawlor, BR Conklin

Genome Biol, Vol. 4, No. 1. (2003)

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Abstract

MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.

@article{citeulike:1884439, abstract = {MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.}, address = {Gladstone Institute of Cardiovascular Disease, University of California, San Francisco, CA 94141-9100, USA.}, author = {Doniger, S. W. and Salomonis, N. and Dahlquist, K. D. and Vranizan, K. and Lawlor, S. C. and Conklin, B. R. }, citeulike-article-id = {1884439}, doi = {http://dx.doi.org/10.1186/gb-2003-4-1-r7}, issn = {1465-6914}, journal = {Genome Biol}, keywords = {gene\_ontology, tools}, number = {1}, posted-at = {2008-02-28 12:11:56}, priority = {2}, title = {MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.}, url = {http://dx.doi.org/10.1186/gb-2003-4-1-r7}, volume = {4}, year = {2003} }

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TY - JOUR ID - citeulike:1884439 L3 - citeulike-article-id:1884439 TI - MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data. JF - Genome Biol VL - 4 IS - 1 AD - Gladstone Institute of Cardiovascular Disease, University of California, San Francisco, CA 94141-9100, USA. SN - 1465-6914 N2 - MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged. KW - gene_ontology KW - tools AU - Doniger, SW AU - Salomonis, N AU - Dahlquist, KD AU - Vranizan, K AU - Lawlor, SC AU - Conklin, BR PY - 2003/// UR - http://dx.doi.org/10.1186/gb-2003-4-1-r7 ER -

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