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hplatero bzip [54 articles]

Recent papers added to hplatero library classified by the tag bzip. You can also see everyone's bzip.
  • Close encounters of many kinds: Fos-Jun interactions that mediate transcription regulatory specificity
    Oncogene, Vol. 20, No. 19. (April 2001), pp. 2438-2452.
    by Yurii
    posted to bzip by hplatero on 2008-05-30 22:20:50 as **
  • Dimers, leucine zippers and DNA-binding domains.
    Trends in genetics : TIG, Vol. 6, No. 2. (February 1990), pp. 36-40.
    by SJ Busch, P Sassone-Corsi
    posted to bzip by hplatero on 2008-05-19 20:55:42 as **
  • The leucine zipper: a hypothetical structure common to a new class of DNA binding proteins.
    Science, Vol. 240 (1988), pp. 1759-1764.
    by Landschulz
    posted to bzip by hplatero on 2008-05-19 20:55:24 as **
  • Yeast putative transcription factors involved in salt tolerance
    FEBS Letters, Vol. 425, No. 2. (27 March 1998), pp. 323-328.
    by Iratxe Mendizabal, Gabino Rios, Jose M Mulet, Ramón Serrano, Iñigo F de Larrinoa
    posted to yap6 cin5 bzip by hplatero on 2008-05-16 22:19:38 as **
  • Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
    J Mol Biol, Vol. 300, No. 2. (7 July 2000), pp. 377-402.
    by B Tripet, K Wagschal, P Lavigne, CT Mant, RS Hodges
    posted to bzip by hplatero on 2008-05-16 00:09:27 as ** along with 2 people ca3295 cjeans
  • Leucine Is the Most Stabilizing Aliphatic Amino Acid in the d Position of a Dimeric Leucine Zipper Coiled Coil
    Biochemistry, Vol. 36 (1997), pp. 12567-12573.
    by Jaideep
    posted to bzip by hplatero on 2008-05-16 00:01:54 as **
  • Reconstruction of ancestral protein interaction networks for the bZIP transcription factors
    Proceedings of the National Academy of Sciences (12 December 2007), 0706339104.
    by John W Pinney, Grigoris D Amoutzias, Magnus Rattray, David L Robertson
    posted to bzip by hplatero on 2008-05-14 07:20:37 as ** along with 4 people tmmurali grahamc cjeans Pao-Yang
  • AP-1 subunits: quarrel and harmony among siblings
    J Cell Sci, Vol. 117, No. 25. (1 December 2004), pp. 5965-5973.
    by Jochen Hess, Peter Angel, Marina Schorpp-Kistner
    posted to bzip by hplatero on 2008-05-14 07:05:51 as **
  • Identification and purification of a Saccharomyces cerevisiae protein with the DNA binding specificity of mammalian activating transcription factor.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 86, No. 1. (January 1989), pp. 109-113.
    by YS Lin, MR Green
    posted to bzip by hplatero on 2008-05-14 04:57:12 as **
  • Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.
    Science, Vol. 290, No. 5499. (15 December 2000), pp. 2105-2110.
    by JL Riechmann, J Heard, G Martin, L Reuber, C Jiang, J Keddie, L Adam, O Pineda, OJ Ratcliffe, RR Samaha, R Creelman, M Pilgrim, P Broun, JZ Zhang, D Ghandehari, BK Sherman, G Yu
    posted to bzip by hplatero on 2008-04-23 18:46:36 as ** along with 4 people and 2 groups tny nickluscombe kengg Hummel EBI-regulation Plantandetc
  • Diverse functions of JNK signaling and c-Jun in stress response and apoptosis
    Oncogene, Vol. 18, No. 45. (November 1999), pp. 6158-6162.
    by Sirpa
    posted to bzip by hplatero on 2008-04-23 18:36:52 as **
  • Transcription Factor Families Have Much Higher Expansion Rates in Plants than in Animals
    Plant Physiol., Vol. 139, No. 1. (1 September 2005), pp. 18-26.
    by Shin-Han Shiu, Ming-Che Shih, Wen-Hsiung Li
    posted to bzip by hplatero on 2008-04-21 22:52:31 as **
  • AP-1 transcription factors in yeast
    Current Opinion in Genetics & Development, Vol. 9, No. 1. (February 1999), pp. 55-61.
    by Mark W Toone, Nic Jones
    posted to bzip by hplatero on 2008-04-17 03:33:05 as **
  • Yeast bZip proteins mediate pleiotropic drug and metal resistance
    J. Biol. Chem., Vol. 268, No. 25. (5 September 1993), pp. 18850-18858.
    by A Wu, JA Wemmie, NP Edgington, M Goebl, JL Guevara, WS Moye-Rowley
    posted to first_paper bzip by hplatero on 2008-04-15 21:54:46 as **
  • Structure-based prediction of bZIP partnering specificity.
    J Mol Biol, Vol. 355, No. 5. (3 February 2006), pp. 1125-1142.
    by G Grigoryan, AE Keating
    posted to bzip by hplatero on 2008-04-15 21:45:40 as ** along with 4 people ca3295 cjeans gwenknight chgjb
  • bZIPDB : A database of regulatory information for human bZIP transcription factors
    BMC Genomics, Vol. 8 (30 May 2007), 136.
    by Taewoo Ryu, Juhyun Jung, Sunjae Lee, Ho J Nam, Sun W Hong, Jae W Yoo, Dong-Ki Lee, Doheon Lee
    posted to bzip by hplatero on 2008-04-15 21:40:32 as ** along with 2 people ihpark cjeans
  • Reduction/oxidation-phosphorylation control of DNA binding in the bZIP dimerization network
    BMC Genomics, Vol. 7, No. 1. (2006)
    by Gregory Amoutzias, Erich B Bauer, Stephen Oliver, David Robertson
    posted to bzip by hplatero on 2008-04-15 20:43:07 as **
  • ER stress signaling by regulated splicing: IRE1/HAC1/XBP1.
    Methods (San Diego, Calif.), Vol. 35, No. 4. (April 2005), pp. 395-416.
    by SH Back, M Schröder, K Lee, K Zhang, RJ Kaufman
    posted to bzip by hplatero on 2008-04-10 20:05:16 as **
  • IRE1- and HAC1-independent transcriptional regulation in the unfolded protein response of yeast.
    Molecular microbiology, Vol. 49, No. 3. (August 2003), pp. 591-606.
    by M Schröder, R Clark, RJ Kaufman
    posted to bzip by hplatero on 2008-04-10 19:56:25 as **
  • Yap5 Is an Iron-Responsive Transcriptional Activator That Regulates Vacuolar Iron Storage in Yeast
    Mol. Cell. Biol., Vol. 28, No. 4. (15 February 2008), pp. 1326-1337.
    by Liangtao Li, Dustin Bagley, Diane M Ward, Jerry Kaplan
    posted to bzip by hplatero on 2008-04-10 19:21:12 as **
  • One Billion Years of bZIP Transcription Factor Evolution: Conservation and Change in Dimerization and DNA-Binding Site Specificity
    Molecular Biology and Evolution, Vol. 24, No. 3. (March 2007), pp. 827-835.
    by Amoutzias, Gd, Veron, As, Weiner, , Robinson-Rechavi, , Bornberg-Bauer, , Oliver, Sg, Robertson, Dl
    posted to bzip by hplatero on 2008-04-08 20:30:04 as ** along with 1 person gwenknight
  • Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice.
    Plant Physiol, Vol. 146, No. 2. (February 2008), pp. 333-350.
    by A Nijhawan, M Jain, AK Tyagi, JP Khurana
    posted to bzip by hplatero on 2008-04-08 19:48:24 as ** along with 2 people icq242500260 gwenknight
  • Electrostatic control of half-site spacing preferences by the cyclic AMP response element-binding protein CREB
    Nucl. Acids Res., Vol. 29, No. 16. (15 August 2001), pp. 3311-3319.
    by Jin K Montclare, Leslie S Sloan, Alanna Schepartz
    posted to binding_specificity bzip by hplatero on 2008-02-11 22:27:04 as **
  • Structural Basis for DNA Recognition by the Basic Region Leucine Zipper Transcription Factor CCAAT/Enhancer-binding Protein alpha
    J. Biol. Chem., Vol. 278, No. 17. (18 April 2003), pp. 15178-15184.
    by Maria Miller, Jon D Shuman, Thomas Sebastian, Zbigniew Dauter, Peter F Johnson
    posted to bzip transfac_consensus_sequences by hplatero on 2008-02-08 21:25:12 as **
  • A thermodynamic scale for leucine zipper stability and dimerization specificity: e and g interhelical interactions.
    EMBO J, Vol. 13, No. 12. (1994), pp. 2849-2861.
    by Krylov
    posted to bzip eg_interactions by hplatero on 2008-02-08 18:37:43 as **
  • A heterodimerizing leucine zipper coiled coil system for examining the specificity of a position interactions: amino acids I, V, L, N, A, and K.
    Biochemistry, Vol. 41, No. 48. (3 December 2002), pp. 14122-14131.
    by A Acharya, SB Ruvinov, J Gal, JR Moll, C Vinson
    posted to bzip ge_interactions by hplatero on 2008-02-08 05:56:30 as **
  • The Arabidopsis HY5 gene encodes a bZIP protein that regulates stimulus-induced development of root and hypocotyl
    Genes Dev., Vol. 11, No. 22. (15 November 1997), pp. 2983-2995.
    by Tokitaka Oyama, Yoshiro Shimura, Kiyotaka Okada
    posted to bzip by hplatero on 2008-01-31 01:38:05 as **
  • Arabidopsis basic leucine zipper transcription factors involved in an abscisic acid-dependent signal transduction pathway under drought and high-salinity conditions
    Proceedings of the National Academy of Sciences, Vol. 97, No. 21. (10 October 2000), pp. 11632-11637.
    by Yuichi Uno, Takashi Furihata, Hiroshi Abe, Riichiro Yoshida, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki
    posted to bzip by hplatero on 2008-01-31 01:30:21 as **
  • Ybp1 is required for the hydrogen peroxide-induced oxidation of the Yap1 transcription factor.
    J Biol Chem, Vol. 278, No. 33. (15 August 2003), pp. 30896-30904.
    by EA Veal, SJ Ross, P Malakasi, E Peacock, BA Morgan
    posted to bzip regulation_of_tfs yap1 yml007w by hplatero on 2008-01-18 22:39:19 as **
  • The Aspergillus niger GCN4 homologue, cpcA, is transcriptionally regulated and encodes an unusual leucine zipper.
    Mol Microbiol, Vol. 23, No. 1. (January 1997), pp. 23-33.
    by C Wanke, S Eckert, G Albrecht, W van Hartingsveldt, PJ Punt, CA van den Hondel, GH Braus
    posted to bzip unusual_lz by hplatero on 2008-01-16 19:43:47 as **
  • AP-1 transcription factors in yeast.
    Curr Opin Genet Dev, Vol. 9, No. 1. (February 1999), pp. 55-61.
    by WM Toone, N Jones
    posted to bzip bzip_regulation yap_family by hplatero on 2008-01-15 19:26:26 as **
  • Yap, a novel family of eight bZIP proteins in Saccharomyces cerevisiae with distinct biological functions
    Mol. Cell. Biol., Vol. 17, No. 12. (1 December 1997), pp. 6982-6993.
    by L Fernandes, C Rodrigues-Pousada, K Struhl
    posted to basic_leucine_zipper bzip yap by hplatero on 2008-01-15 18:57:13 as **
  • Yeast putative transcription factors involved in salt tolerance.
    FEBS Lett, Vol. 425, No. 2. (27 March 1998), pp. 323-328.
    by I Mendizabal, G Rios, JM Mulet, R Serrano, IF de Larrinoa
    posted to bzip transcription_factor yap by hplatero on 2008-01-15 18:44:21 as **
  • Regulation of the arsenic-responsive transcription factor Yap8p involves the ubiquitin-proteasome pathway.
    J Cell Sci, Vol. 120, No. Pt 2. (15 January 2007), pp. 256-264.
    by Y Di, MJ Tamás
    posted to bzip by hplatero on 2008-01-07 18:32:01 as **
  • Predicting specificity in bZIP coiled-coil protein interactions.
    Genome Biol, Vol. 5, No. 2. (2004)
    by JH Fong, AE Keating, M Singh
    posted to bzip by hplatero on 2007-12-17 19:16:10 as ** along with 3 people cjeans gwenknight chgjb
  • Transcriptional Activation of Metalloid Tolerance Genes in Saccharomyces cerevisiae Requires the AP-1-like Proteins Yap1p and Yap8p
    Mol. Biol. Cell, Vol. 15, No. 5. (1 May 2004), pp. 2049-2060.
    by Robert Wysocki, Pierre-Karl Fortier, Ewa Maciaszczyk, Michael Thorsen, Anick Leduc, Asa Odhagen, Grzegorz Owsianik, Stanislaw Ulaszewski, Dindial Ramotar, Markus J Tamas
    posted to acr1 arr1 bzip ypr199c by hplatero on 2007-12-10 18:30:21 as **
  • Comprehensive identification of human bZIP interactions with coiled-coil arrays.
    Science, Vol. 300, No. 5628. (27 June 2003), pp. 2097-2101.
    by JR Newman, AE Keating
    posted to arr1 bzip ppi by hplatero on 2007-12-10 17:43:02 as ** along with 1 person kevinchannon
  • The 'interactome' of the Knr4/Smi1, a protein implicated in coordinating cell wall synthesis with bud emergence in Saccharomyces cerevisiae.
    Mol Genet Genomics, Vol. 275, No. 3. (March 2006), pp. 217-230.
    by F Basmaji, H Martin-Yken, F Durand, A Dagkessamanskaia, C Pichereaux, M Rossignol, J Francois
    posted to bzip cin5 knr4 smi1 yap4 by hplatero on 2007-11-28 23:46:53 as **
  • Expression of YAP4 in Saccharomyces cerevisiae under osmotic stress.
    Biochem J, Vol. 379, No. Pt 2. (15 April 2004), pp. 367-374.
    by T Nevitt, J Pereira, D Azevedo, P Guerreiro, C Rodrigues-Pousada
    posted to bzip cin5 osmotic_stress yap4 by hplatero on 2007-11-28 21:46:13 as **
  • Two nuclear proteins, Cin5 and Ydr259c, confer resistance to cisplatin in Saccharomyces cerevisiae.
    Mol Pharmacol, Vol. 59, No. 3. (March 2001), pp. 470-474.
    by T Furuchi, H Ishikawa, N Miura, M Ishizuka, K Kajiya, S Kuge, A Naganuma
    posted to yap6 yap4 osmotic_stress cin5 bzip by hplatero on 2007-11-27 22:06:35 as **
  • Yeast SKO1 gene encodes a bZIP protein that binds to the CRE motif and acts as a repressor of transcription.
    Nucleic Acids Res, Vol. 20, No. 20. (25 October 1992), pp. 5271-5278.
    by JO Nehlin, M Carlberg, H Ronne
    posted to bzip repressor sko1 transcription by hplatero on 2007-11-26 21:12:29 as **
  • Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress.
    Mol Cell, Vol. 9, No. 6. (June 2002), pp. 1307-1317.
    by M Proft, K Struhl
    posted to bzip hog1 sko1 by hplatero on 2007-11-26 18:07:50 as **
  • Interdependent recruitment of SAGA and Srb mediator by transcriptional activator Gcn4p.
    Mol Cell Biol, Vol. 25, No. 9. (May 2005), pp. 3461-3474.
    by H Qiu, C Hu, F Zhang, GJ Hwang, MJ Swanson, C Boonchird, AG Hinnebusch
    posted to bzip gcn4 mediator saga by hplatero on 2007-11-21 20:35:28 as ** along with 1 person mapplab
  • Characterization of physical interactions of the putative transcriptional adaptor, ADA2, with acidic activation domains and TATA-binding protein.
    J Biol Chem, Vol. 270, No. 33. (18 August 1995), pp. 19337-19344.
    by NA Barlev, R Candau, L Wang, P Darpino, N Silverman, SL Berger
    posted to ada2 bzip by hplatero on 2007-11-21 20:22:57 as **
  • The yeast transcription factor genes YAP1 and YAP2 are subject to differential control at the levels of both translation and mRNA stability.
    Nucleic Acids Res, Vol. 26, No. 5. (1 March 1998), pp. 1150-1159.
    by C Vilela, B Linz, C Rodrigues-Pousada, JE McCarthy
    posted to bzip yap1 yap2 by hplatero on 2007-11-21 20:09:32 as **
  • The Saccharomyces cerevisiae Sko1p transcription factor mediates HOG pathway-dependent osmotic regulation of a set of genes encoding enzymes implicated in protection from oxidative damage.
    Mol Microbiol, Vol. 40, No. 5. (June 2001), pp. 1067-1083.
    by M Rep, M Proft, F Remize, M Tamás, R Serrano, JM Thevelein, S Hohmann
    posted to bzip hog oxidative pathway sko1 stress by hplatero on 2007-11-21 20:04:57 as **
  • Oxidant-specific folding of YAP1P regulates both transcriptional activation and nuclear localization.
    J Biol Chem (11 October 2005)
    by Kailash Gulshan, Sherry A A Rovinsky, Sean T T Coleman, W Scott S Moye-Rowley
    posted to bzip yap1 by hplatero on 2007-11-21 19:57:13 as ** along with 1 person Schmidtc
  • Dimerization specificity of all 67 B-ZIP motifs in Arabidopsis thaliana: a comparison to Homo sapiens B-ZIP motifs.
    Nucleic Acids Res, Vol. 32, No. 11. (2004), pp. 3435-3445.
    by CD Deppmann, A Acharya, V Rishi, B Wobbes, S Smeekens, EJ Taparowsky, C Vinson
    posted to arabidopsis bzip dimerization specificity by hplatero on 2007-11-21 19:45:46 as ** along with 2 people gwenknight phoenixzxl
  • B-ZIP proteins encoded by the Drosophila genome: evaluation of potential dimerization partners.
    Genome Res, Vol. 12, No. 8. (August 2002), pp. 1190-1200.
    by J Fassler, D Landsman, A Acharya, JR Moll, M Bonovich, C Vinson
    posted to bzip drosophila by hplatero on 2007-11-21 19:42:47 as ** along with 1 person gwenknight
  • An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p.
    Mol Cell Biol, Vol. 24, No. 10. (May 2004), pp. 4104-4117.
    by H Qiu, C Hu, S Yoon, K Natarajan, MJ Swanson, AG Hinnebusch
    posted to bzip gcn4 by hplatero on 2007-11-21 19:39:31 as **
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