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inesdesantiago wide_mapping [23 articles]

Recent papers added to inesdesantiago library classified by the tag wide_mapping. You can also see everyone's wide_mapping.
  • Spatial mapping of splicing factor complexes involved in exon and intron definition
    J. Cell Biol., Vol. 181, No. 6. (16 June 2008), pp. 921-934.
    by Jonathan D Ellis, David Lleres, Marco Denegri, Angus I Lamond, Javier F Caceres
  • H2A.Z: View from the Top
    Structure, Vol. 16, No. 2. (12 February 2008), pp. 166-179.
    by Jordanka Zlatanova, Amit Thakar
    posted to modifications review wide_mapping by inesdesantiago on 2008-08-05 15:33:16 as **
  • Genome-wide mapping and characterization of hypomethylated sites in human tissues and breast cancer cell lines.
    Genome research, Vol. 18, No. 5. (May 2008), pp. 791-801.
    by YJ Shann, C Cheng, CH Chiao, DT Chen, PH Li, MT Hsu
    posted to methylation wide_mapping by inesdesantiago on 2008-08-05 10:33:45 as ** along with 1 person jfr
  • Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation
    Nature Genetics, Vol. 40, No. 6. (18 May 2008), pp. 741-750.
    by Yutaka Kondo, Lanlan Shen, Alfred S Cheng, Saira Ahmed, Yanis Boumber, Chantale Charo, Tadanori Yamochi, Takeshi Urano, Koichi Furukawa, Bernard Kwabi-Addo, David L Gold, Yoshitaka Sekido, Tim H Huang, Jean-Pierre J Issa
  • Differential H3K4 Methylation Identifies Developmentally Poised Hematopoietic Genes
    Developmental Cell, Vol. 14, No. 5. (13 May 2008), pp. 798-809.
    by Keith Orford, Peter Kharchenko, Weil Lai, Maria C Dao, David J Worhunsky, Adam Ferro, Viktor Janzen, Peter J Park, David T Scadden
    posted to modifications wide_mapping by inesdesantiago on 2008-08-05 09:50:59 as *****
  • Sensitive ChIP-DSL technology reveals an extensive estrogen receptor alpha-binding program on human gene promoters.
    Proc Natl Acad Sci U S A, Vol. 104, No. 12. (20 March 2007), pp. 4852-4857.
    by YS Kwon, I Garcia-Bassets, KR Hutt, CS Cheng, M Jin, D Liu, C Benner, D Wang, Z Ye, M Bibikova, JB Fan, L Duan, CK Glass, MG Rosenfeld, XD Fu
    posted to wide_mapping by inesdesantiago on 2008-08-04 18:07:44 as ** along with 2 people jfr kengg
  • Genome-wide RNA polymerase II: not genes only!
    Trends in Biochemical Sciences, Vol. 33, No. 6. (June 2008), pp. 265-273.
    by Frederic Koch, Frederic Jourquin, Pierre Ferrier, Jean-Christophe Andrau
    posted to polymerase review wide_mapping by inesdesantiago on 2008-08-04 17:50:36 as *****
  • Characterization of genome-wide p53-binding sites upon stress response
    Nucl. Acids Res., Vol. 36, No. 11. (1 June 2008), pp. 3639-3654.
    by Leonie Smeenk, Simon J van Heeringen, Max Koeppel, Marc A van Driel, Stefanie J Bartels, Robert C Akkers, Sergei Denissov, Hendrik G Stunnenberg, Marion Lohrum
    posted to cancer wide_mapping by inesdesantiago on 2008-08-04 17:29:46 as ** along with 1 person jyuh
  • The Recombinational Anatomy of a Mouse Chromosome
    PLoS Genet, Vol. 4, No. 7. (11 July 2008), e1000119.
    by Kenneth Paigen, Jin P Szatkiewicz, Kathryn Sawyer, Nicole Leahy, Emil D Parvanov, Siemon H Ng, Joel H Graber, Karl W Broman, Petko M Petkov
    posted to wide_mapping by inesdesantiago on 2008-08-04 13:48:40 as ** along with 2 people djkt jasontsai
  • The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome
    PLoS Genet, Vol. 4, No. 7. (25 July 2008), e1000138.
    by Yutao Fu, Manisha Sinha, Craig L Peterson, Zhiping Weng
  • Genome-wide mapping of allele-specific protein-DNA interactions in human cells
    Nature Methods, Vol. 5, No. 4. (16 March 2008), pp. 307-309.
    by Nathaniel D Maynard, Jing Chen, Rhona K Stuart, Jian-Bing Fan, Bing Ren
  • Integration of External Signaling Pathways with the Core Transcriptional Network in Embryonic Stem Cells
    Cell, Vol. 133, No. 6. (13 June 2008), pp. 1106-1117.
    by Xi Chen, Han Xu, Ping Yuan, Fang Fang, Mikael Huss, Vinsensius B Vega, Eleanor Wong, Yuriy L Orlov, Weiwei Zhang, Jianming Jiang, Yuin-Han Loh, Hock C Yeo, Zhen X Yeo, Vipin Narang, Kunde R Govindarajan, Bernard Leong, Atif Shahab, Yijun Ruan, Guillaume Bourque, Wing-Kin Sung, Neil D Clarke, Chia-Lin Wei, Huck-Hui Ng
  • Polycomb complexes repress developmental regulators in murine embryonic stem cells
    Nature (19 April 2006)
    by Laurie A Boyer, Kathrin Plath, Julia Zeitlinger, Tobias Brambrink, Lea A Medeiros, Tong I Lee, Stuart S Levine, Marius Wernig, Adriana Tajonar, Mridula K Ray, George W Bell, Arie P Otte, Miguel Vidal, David K Gifford, Richard A Young, Rudolf Jaenisch
  • Genome-scale DNA methylation maps of pluripotent and differentiated cells
    Nature (06 July 2008)
    by Alexander Meissner, Tarjei S Mikkelsen, Hongcang Gu, Marius Wernig, Jacob Hanna, Andrey Sivachenko, Xiaolan Zhang, Bradley E Bernstein, Chad Nusbaum, David B Jaffe, Andreas Gnirke, Rudolf Jaenisch, Eric S Lander
  • Control of developmental regulators by polycomb in human embryonic stem cells.
    Cell, Vol. 125, No. 2. (21 April 2006), pp. 301-313.
    by TI Lee, RG Jenner, LA Boyer, MG Guenther, SS Levine, RM Kumar, B Chevalier, SE Johnstone, MF Cole, K Isono, H Koseki, T Fuchikami, K Abe, HL Murray, JP Zucker, B Yuan, GW Bell, E Herbolsheimer, NM Hannett, K Sun, DT Odom, AP Otte, TL Volkert, DP Bartel, DA Melton, DK Gifford, R Jaenisch, RA Young
  • A chromatin landmark and transcription initiation at most promoters in human cells.
    Cell, Vol. 130, No. 1. (13 July 2007), pp. 77-88.
    by MG Guenther, SS Levine, LA Boyer, R Jaenisch, RA Young
  • Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs
    Genome Res. (27 November 2007), gr.6654808.
    by Leah O Barrera, Zirong Li, Andrew D Smith, Karen C Arden, Webster K Cavenee, Michael Q Zhang, Roland D Green, Bing Ren
  • An Extended Transcriptional Network for Pluripotency of Embryonic Stem Cells
    Cell, Vol. 132, No. 6. (21 March 2008), pp. 1049-1061.
    by Jonghwan Kim, Jianlin Chu, Xiaohua Shen, Jianlong Wang, Stuart H Orkin
  • A lexicon for homeodomain-DNA recognition.
    Cell, Vol. 133, No. 7. (27 June 2008), pp. 1133-1135.
    by M Affolter, M Slattery, RS Mann
  • Global Mapping of DNA Methylation in Mouse Promoters Reveals Epigenetic Reprogramming of Pluripotency Genes
    PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000116.
    by Cassandra R Farthing, Gabriella Ficz, Ray K Ng, Chun-Fung Chan, Simon Andrews, Wendy Dean, Myriam Hemberger, Wolf Reik
  • notes CpG Island Mapping by Epigenome Prediction.
    PLoS Comput Biol, Vol. 3, No. 6. (8 June 2007)
    by Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer
  • notes High-resolution profiling of histone methylations in the human genome.
    Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837.
    by A Barski, S Cuddapah, K Cui, TY Roh, DE Schones, Z Wang, G Wei, I Chepelev, K Zhao
  • notes Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
    Nature (01 July 2007)
    by Tarjei S Mikkelsen, Manching Ku, David B Jaffe, Biju Issac, Erez Lieberman, Georgia Giannoukos, Pablo Alvarez, William Brockman, Tae-Kyung Kim, Richard P Koche, William Lee, Eric Mendenhall, Aisling O’donovan, Aviva Presser, Carsten Russ, Xiaohui Xie, Alexander Meissner, Marius Wernig, Rudolf Jaenisch, Chad Nusbaum, Eric S Lander, Bradley E Bernstein
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