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j3xucite function [12 articles]

Recent papers added to j3xucite library classified by the tag function. You can also see everyone's function.
  • Novel knowledge-based mean force potential at the profile level
    BMC Bioinformatics, Vol. 7 (27 June 2006), 324.
    by Qiwen Dong, Xiaolong Wang, Lei Lin
    posted to energy function by j3xucite on 2008-03-24 04:38:34 as ** along with 1 person aengisch
  • OPUS-PSP: An Orientation-dependent Statistical All-atom Potential Derived from Side-chain Packing
    Journal of Molecular Biology, Vol. 376, No. 1. (8 February 2008), pp. 288-301.
    by Mingyang Lu, Athanasios D Dousis, Jianpeng Ma
    posted to energy function by j3xucite on 2008-03-24 04:37:40 as ** along with 2 people cdeane kgutwin
  • Factors affecting the ability of energy functions to discriminate correct from incorrect folds
    Journal of Molecular Biology, Vol. 266, No. 4. (7 March 1997), pp. 831-846.
    by Britt H Park, Enoch S Huang, Michael Levitt
    posted to energy function by j3xucite on 2008-01-13 04:15:37 as ** along with 2 people wilbur Alois
  • An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction
    Journal of Molecular Biology, Vol. 275, No. 5. (6 February 1998), pp. 895-916.
    by Ram Samudrala, John Moult
    posted to energy function by j3xucite on 2008-01-13 04:13:02 as **
  • OPUS-Ca: A knowledge-based potential function requiring only Calpha positions
    Protein Sci, Vol. 16, No. 7. (1 July 2007), pp. 1449-1463.
    by Yinghao Wu, Mingyang Lu, Mingzhi Chen, Jialin Li, Jianpeng Ma
    posted to energy function by j3xucite on 2007-11-06 03:28:00 as ** along with 1 person kgutwin
  • Automated protein function prediction--the genomic challenge.
    Brief Bioinform (23 May 2006)
    by Iddo Friedberg
    posted to function prediction by j3xucite on 2007-05-13 05:08:12 as ** along with 6 people and 3 groups tjimenez yas marcius cdallett sgoetz bootsy T_lab BioinfoCIPF SGU-CIPF
  • The art of gene function prediction
    Nature Biotechnology, Vol. 24, No. 12., pp. 1474-1475.
    by TM Murali, Chang-Jiun Wu, Simon Kasif
    posted to function prediction by j3xucite on 2007-05-10 16:40:21 as ** along with 2 people mitko carlk
  • Statistical potential for assessment and prediction of protein structures.
    Protein Science, Vol. 15, No. 11. (November 2006), pp. 2507-2524.
    by MY Shen, A Sali
    posted to energy function by j3xucite on 2007-05-10 00:07:40 as ** along with 4 people kgutwin wouterboomsma cdeane dimka
  • Whole-proteome prediction of protein function via graph-theoretic analysis of interaction maps.
    Bioinformatics, Vol. 21 Suppl 1 (1 June 2005)
    by E Nabieva, K Jim, A Agarwal, B Chazelle, M Singh
    posted to function prediction by j3xucite on 2007-05-07 17:32:25 as ** along with 7 people and 2 groups tmmurali okarsligil lfriedl wnpx jiny Pao-Yang carlk kdl Bioinformatics
  • ConSeq: the identification of functionally and structurally important residues in protein sequences
    Bioinformatics, Vol. 20, No. 8. (22 May 2004), pp. 1322-1324.
    by Carine Berezin, Fabian Glaser, Josef Rosenberg, Inbal Paz, Tal Pupko, Piero Fariselli, Rita Casadio, Nir Ben-Tal
    posted to function prediction by j3xucite on 2007-02-02 19:53:33 as ** along with 1 person sriram_s
  • An accurate, residue-level, pair potential of mean force for folding and binding based on the distance-scaled, ideal-gas reference state.
    Protein Science, Vol. 13, No. 2. (February 2004), pp. 400-411.
    by C Zhang, S Liu, H Zhou, Y Zhou
    posted to energy function by j3xucite on 2006-07-09 23:49:05 as ** along with 2 people mirzazadeh kgutwin
  • Linear programming optimization and a double statistical filter for protein threading protocols.
    Proteins, Vol. 45, No. 3. (15 November 2001), pp. 241-261.
    by J Meller, R Elber
    posted to energy function threading training by j3xucite on 2006-03-11 20:05:42 as **
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