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jandot library [82 articles]

Статьи, недавно добавленные в библиотеку jandot .
  • Advanced Genomic Data Mining
    PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000121.
    by Xosé M Fernández-Suárez, Ewan Birney
    posted to mining by jandot on 2008-09-26 20:58:43 as read along with 8 people and 1 group cisevol rdiaz aramesh2 sunhwan druvus mitko jameswasmuth dullhunk BergmanLab
  • Databases, data tombs and dust in the wind
    Bioinformatics, Vol. 24, No. 19. (1 October 2008), pp. 2127-2128.
    by Jonathan D Wren, Alex Bateman
    posted to database by jandot on 2008-09-26 11:16:30 as ** along with 12 people and 1 group hpiwowar ajaymalik cisevol renatomilani sjcockell reyez Yanno druvus GeeSharpMinor neils mdstobbe dullhunk BergmanLab
  • R/parallel - speeding up bioinformatics analysis with R
    BMC Bioinformatics, Vol. 9 (22 September 2008), 390.
    by Gonzalo Vera, Ritsert C Jansen, Remo L Suppi
    posted to r bioinformatics by jandot on 2008-09-22 22:38:38 as **** along with 14 people and 1 group dakelley chad_davis ptrobajo pengchy shikin robertlischke chrisamiller cisevol druvus renatomilani rdiaz nuin GeeSharpMinor neils BergmanLab
  • Structural variation in the human genome
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 85-97.
    by Lars Feuk, Andrew R Carson, Stephen W Scherer
    posted to variation cnv by jandot on 2008-09-19 13:32:15 as ** along with 15 people and 10 groups cgreal balajis bala balicea dchughes tabu darcyduke adepace AaronDarling rdiaz massivemayhem cat_worth jmrivort ccr Lip CGREL structural_bioinformatics Bioinformatics EisenLab SFX-Verde-team-MITLibraries G4ID G-quadruplex Supramolecular DictyosteliumGroup Genetics-of-Gambling
  • A robust statistical method for case-control association testing with copy number variation
    Nature Genetics (7 September 2008)
    by Chris Barnes, Vincent Plagnol, Tomas Fitzgerald, Richard Redon, Jonathan Marchini, David Clayton, Matthew E Hurles
    posted to cnv by jandot on 2008-09-19 10:23:57 as **
  • Double Dutch for duplications
    Nature Genetics, Vol. 39, No. 11., pp. 1303-1304.
    by Ewan Birney
    posted to cnv by jandot on 2008-09-15 14:01:18 as ** along with 1 person cjeans
  • Chromosome Fragile Sites
    Annual Review of Genetics, Vol. 41, No. 1. (2007), pp. 169-192.
    by Sandra G Durkin, Thomas W Glover
    posted to segmental_duplication fragile_site by jandot on 2008-09-15 11:37:37 as **
  • Segmental Duplications Arise from Pol32-Dependent Repair of Broken Forks through Two Alternative Replication-Based Mechanisms
    PLoS Genet, Vol. 4, No. 9. (2008), e1000175.
    by Celia Payen, Romain Koszul, Bernard Dujon, Gilles Fischer
    posted to segmental_duplication cnv by jandot on 2008-09-09 12:57:31 as **** along with 2 people bpcusack djkt
  • Integrated detection and population-genetic analysis of SNPs and copy number variation
    Nature Genetics (2008)
    by Steven A Mccarroll, Finny G Kuruvilla, Joshua M Korn, Simon Cawley, James Nemesh, Alec Wysoker, Michael H Shapero, Paul I de Bakker, Julian B Maller, Andrew Kirby, Amanda L Elliott, Melissa Parkin, Earl Hubbell, Teresa Webster, Rui Mei, James Veitch, Patrick J Collins, Robert Handsaker, Steve Lincoln, Marcia Nizzari, John Blume, Keith W Jones, Rich Rava, Mark J Daly, Stacey B Gabriel, David Altshuler
    posted to cnv by jandot on 2008-09-08 10:26:00 as ****
  • Asymmetric histone modifications between the original and derived loci of human segmental duplications
    Genome Biology, Vol. 9, No. 7. (2008)
    by Deyou Zheng
    posted to segmental_duplication epigenetics by jandot on 2008-09-05 14:04:54 as ** along with 2 people djkt bpcusack
  • Intra- and interindividual epigenetic variation in human germ cells.
    American journal of human genetics, Vol. 79, No. 1. (July 2006), pp. 67-84.
    by JM Flanagan, V Popendikyte, N Pozdniakovaite, M Sobolev, A Assadzadeh, A Schumacher, M Zangeneh, L Lau, C Virtanen, SC Wang, A Petronis
    posted to methylation epigenetics by jandot on 2008-09-05 14:01:48 as **
  • A probabilistic generative model for GO enrichment analysis
    Nucl. Acids Res. (1 August 2008), gkn434.
    by Yong Lu, Roni Rosenfeld, Itamar Simon, Gerard J Nau, Ziv Bar-Joseph
    posted to gene_ontology enrichment by jandot on 2008-09-05 10:29:03 as **** along with 6 people rdiaz paszkows barriot waszak tmmurali raiyar
  • Big data: Distilling meaning from data
    Nature, Vol. 455, No. 7209. (2008), pp. 30-30.
    by Felice Frankel, Rosalind Reid
    posted to visualization data_management by jandot on 2008-09-04 08:38:57 as *** along with 7 people and 1 group silberbauer ianturton amarois Zephyrus applebyb fgibson dullhunk Roswell Cancer Crosstalk
  • Primate segmental duplications: crucibles of evolution, diversity and disease
    Nature Reviews Genetics, Vol. 7, No. 7. (13 June 2006), pp. 552-564.
    by Jeffrey A Bailey, Evan E Eichler
    posted to segmental_duplication by jandot on 2008-09-03 19:00:32 as *** along with 2 people and 2 groups chad_davis dchughes G4ID Genetics-of-Gambling
  • Current topics in genome evolution: Molecular mechanisms of new gene formation
    Cellular and Molecular Life Sciences (CMLS), Vol. 64, No. 5. (14 March 2007), pp. 542-554.
    by D Babushok, E Ostertag, H Kazazian
    posted to segmental_duplication evolution by jandot on 2008-09-03 18:56:18 as ** along with 1 person and 1 group stajich Berkeley Mycology
  • Using GOstats to test gene lists for GO term association
    Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. 257-258.
    by Falcon, , Gentleman,
    posted to r gene_ontology by jandot on 2008-09-02 15:29:36 as ** along with 3 people jyuh macavity1g mcgannd
  • Extensive Copy-Number Variation of the Human Olfactory Receptor Gene Family
    The American Journal of Human Genetics, Vol. 83, No. 2. (8 August 2008), pp. 228-242.
    by Janet M Young, Raelynn M Endicott, Sean S Parghi, Megan Walker, Jeffrey M Kidd, Barbara J Trask
    posted to cnv by jandot on 2008-09-02 14:54:40 as ** along with 1 person jm12
  • Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes
    Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853.
    by Barbara E Stranger, Matthew S Forrest, Mark Dunning, Catherine E Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E Hurles, Emmanouil T Dermitzakis
    posted to cnv by jandot on 2008-08-27 15:23:42 as ** along with 19 people and 3 groups waszak daed psique jo_davies srp33 jyuh jfr dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu cisevol caseybrown frohike Bioinformatics EisenLab cis-regulatory-evolution
  • Evolutionary Dynamics of the T-Cell Receptor VB Gene Family as Inferred from the Human and Mouse Genomic Sequences
    Mol Biol Evol, Vol. 18, No. 4. (1 April 2001), pp. 503-513.
    by Chen Su, Masatoshi Nei
    posted to cow tcr by jandot on 2008-08-26 20:44:26 as **
  • Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution.
    Nature, Vol. 432, No. 7018. (9 December 2004), pp. 695-716.
    by LW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, P Bork, DW Burt, MA Groenen, ME Delany, JB Dodgson, AT Chinwalla, PF Cliften, SW Clifton, KD Delehaunty, C Fronick, RS Fulton, TA Graves, C Kremitzki, D Layman, V Magrini, JD McPherson, TL Miner, P Minx, WE Nash, MN Nhan, JO Nelson, LG Oddy, CS Pohl, J Randall-Maher, SM Smith, JW Wallis, SP Yang, MN Romanov, CM Rondelli, B Paton, J Smith, D Morrice, L Daniels, HG Tempest, L Robertson, JS Masabanda, DK Griffin, A Vignal, V Fillon, L Jacobbson, S Kerje, L Andersson, RP Crooijmans, J Aerts, JJ van der Poel, H Ellegren, RB Caldwell, SJ Hubbard, DV Grafham, AM Kierzek, SR McLaren, IM Overton, H Arakawa, KJ Beattie, Y Bezzubov, PE Boardman, JK Bonfield, MD Croning, RM Davies, MD Francis, SJ Humphray, CE Scott, RG Taylor, C Tickle, WR Brown, J Rogers, JM Buerstedde, SA Wilson, L Stubbs, I Ovcharenko, L Gordon, S Lucas, MM Miller, H Inoko, T Shiina, J Kaufman, J Salomonsen, K Skjoedt, GK Wong, J Wang, B Liu, J Wang, J Yu, H Yang, M Nefedov, M Koriabine, PJ Dejong, L Goodstadt, C Webber, NJ Dickens, I Letunic, M Suyama, D Torrents, C von Mering, EM Zdobnov, K Makova, A Nekrutenko, L Elnitski, P Eswara, DC King, S Yang, S Tyekucheva, A Radakrishnan, RS Harris, F Chiaromonte, J Taylor, J He, M Rijnkels, S Griffiths-Jones, A Ureta-Vidal, MM Hoffman, J Severin, SM Searle, AS Law, D Speed, D Waddington, Z Cheng, E Tuzun, E Eichler, Z Bao, P Flicek, DD Shteynberg, MR Brent, JM Bye, EJ Huckle, S Chatterji, C Dewey, L Pachter, A Kouranov, Z Mourelatos, AG Hatzigeorgiou, AH Paterson, R Ivarie, M Brandstrom, E Axelsson, N Backstrom, S Berlin, MT Webster, O Pourquie, A Reymond, C Ucla, SE Antonarakis, M Long, JJ Emerson, E Betrán, I Dupanloup, H Kaessmann, AS Hinrichs, G Bejerano, TS Furey, RA Harte, B Raney, A Siepel, WJ Kent, D Haussler, E Eyras, R Castelo, JF Abril, S Castellano, F Camara, G Parra, R Guigo, G Bourque, G Tesler, PA Pevzner, A Smit, LA Fulton, ER Mardis, RK Wilson,
    posted to chicken sequence by jandot on 2008-08-26 12:13:40 as read along with 5 people and 4 groups aprasad dchughes dullhunk harikrishna djkt hst-bmi Bioinformatics G4ID Genetics-of-Gambling
  • The minimum information required for reporting a molecular interaction experiment (MIMIx)
    Nature Biotechnology, Vol. 25, No. 8. (08 August 2007), pp. 894-898.
    by Sandra Orchard, Lukasz Salwinski, Samuel Kerrien, Luisa Montecchi-Palazzi, Matthias Oesterheld, Volker Stümpflen, Arnaud Ceol, Andrew Chatr-Aryamontri, John Armstrong, Peter Woollard, John J Salama, Susan Moore, Jérôme Wojcik, Gary D Bader, Marc Vidal, Michael E Cusick, Mark Gerstein, Anne-Claude Gavin, Giulio Superti-Furga, Jack Greenblatt, Joel Bader, Peter Uetz, Mike Tyers, Pierre Legrain, Stan Fields, Nicola Mulder, Michael Gilson, Michael Niepmann, Lyle Burgoon, Javier, Carlos Prieto, Victoria M Perreau, Chris Hogue, Hans-Werner Mewes, Rolf Apweiler, Ioannis Xenarios, David Eisenberg, Gianni Cesareni, Henning Hermjakob
    posted to guidelines miqas by jandot on 2008-08-22 16:16:58 as ** along with 6 people and 1 group jyuh hpiwowar yeastyboy grahamc softsimu zwang ParkinsonLab_at_MaRS
  • Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA).
    Omics : a journal of integrative biology, Vol. 10, No. 2. (2006), pp. 231-237.
    by J Leebens-Mack, T Vision, E Brenner, JE Bowers, S Cannon, MJ Clement, CW Cunningham, C dePamphilis, R deSalle, JJ Doyle, JA Eisen, X Gu, J Harshman, RK Jansen, EA Kellogg, EV Koonin, BD Mishler, H Philippe, JC Pires, YL Qiu, SY Rhee, K Sjölander, DE Soltis, PS Soltis, DW Stevenson, K Wall, T Warnow, C Zmasek
    posted to guidelines miqas by jandot on 2008-08-22 16:16:18 as ** along with 1 person and 1 group rvosa FAB-lab
  • A minimal and extensible data model for genetical genomics
    by Morris A Swertz
    posted to association miqas qtl by jandot on 2008-08-22 16:15:19 as **
  • The impact of Life Science Identifier on informatics data
    Drug Discovery Today, Vol. 10, No. 22. (15 November 2005), pp. 1566-1572.
    by Sean Martin, Moses M Hohman, Ted Liefeld
    posted to data_management miqas web_20 by jandot on 2008-08-22 16:14:38 as ** along with 2 people nicklynch moborg
  • QTL Express: mapping quantitative trait loci in simple and complex pedigrees
    Bioinformatics, Vol. 18, No. 2. (1 February 2002), pp. 339-340.
    by George Seaton, Chris S Haley, Sara A Knott, Mike Kearsey, Peter M Visscher
    posted to miqas qtl by jandot on 2008-08-22 16:13:42 as **
  • LOD significance thresholds for QTL analysis in experimental populations of diploid species
    Heredity, Vol. 83 (November 1999), pp. 613-624.
    by JW Van Ooijen
    posted to miqas qtl by jandot on 2008-08-22 16:12:55 as **
  • Ensembl 2008.
    Nucleic Acids Research (13 November 2007)
    by P Flicek, BLL Aken, K Beal, B Ballester, M Caccamo, Y Chen, L Clarke, G Coates, F Cunningham, T Cutts, T Down, SCC Dyer, T Eyre, S Fitzgerald, J Fernandez-Banet, S Gräf, S Haider, M Hammond, R Holland, KLL Howe, K Howe, N Johnson, A Jenkinson, A Kähäri, D Keefe, F Kokocinski, E Kulesha, D Lawson, I Longden, K Megy, P Meidl, B Overduin, A Parker, B Pritchard, A Prlic, S Rice, D Rios, M Schuster, I Sealy, G Slater, D Smedley, G Spudich, S Trevanion, AJJ Vilella, J Vogel, S White, M Wood, E Birney, T Cox, V Curwen, R Durbin, XMM Fernandez-Suarez, J Herrero, TJPJ Hubbard, A Kasprzyk, G Proctor, J Smith, A Ureta-Vidal, S Searle
    posted to miqas resource by jandot on 2008-08-22 16:11:25 as ** along with 9 people raistrick jyuh hpiwowar flexer daed dullhunk skumagai tharris janasont
  • High resolution mapping and identification of new quantitative trait loci (QTL) affecting susceptibility to Marek's disease
    Animal Genetics, Vol. 30, No. 2. (1999), pp. 126-135.
    by N Yonash, LD Bacon, RL Witter, HH Cheng
    posted to miqas qtl by jandot on 2008-08-22 16:10:39 as **
  • Genetic resistance to avian viruses
    Revue Scientifique et Technique, Vol. 17, No. 1. (April 1998), pp. 249-255.
    by N Bumstead
    posted to miqas by jandot on 2008-08-22 16:09:49 as **
  • Quantitative trait locus mapping in chickens by selective DNA pooling with dinucleotide microsatellite markers by using purified DNA and fresh or frozen red blood cells as applied to marker-assisted selection
    Poultry Science, Vol. 81, No. 3. (1 March 2002), pp. 283-292.
    by E Lipkin, J Fulton, H Cheng, N Yonash, M Soller
    posted to miqas qtl by jandot on 2008-08-22 16:07:38 as **
  • Mapping quantitative trait loci affecting fatness and breast muscle weight in meat-type chicken lines divergently selected on abdominal fatness
    Genetics Selection Evolution, Vol. 38 (2006), pp. 85-97.
    by Sandrine Lagarrigue, Frederique Pitel, Wilfrid Carre, Behname Abasht, Pascale Le Roy, Andre Neau, Yves Amigues, Michel Sourdioux, Jean Simon, Larry Cogburn, Sammy Aggrey, Bernard Leclercq, Alain Vignal, Madeleine Douaire
    posted to miqas qtl by jandot on 2008-08-22 16:07:02 as **
  • Mapping of quantitative trait loci affecting quality and production traits in egg layers
    Poultry Science, Vol. 81, No. 7. (1 July 2002), pp. 919-927.
    by M Tuiskula-Haavisto, M Honkatukia, J Vilkki, DJ de Koning, NF Schulman, A Maki-Tanila
    posted to miqas qtl by jandot on 2008-08-22 16:04:26 as **
  • Identification of trait loci affecting white meat percentage and other growth and carcass traits in commercial broiler chickens
    Poultry Science, Vol. 85, No. 4. (1 April 2006), pp. 593-605.
    by JP Mcelroy, JJ Kim, DE Harry, Brown, JC Dekkers, SJ Lamont
    posted to miqas qtl by jandot on 2008-08-22 16:03:53 as **
  • Chicken genomics: Feather-pecking and victim pigmentation
    Nature, Vol. 431, No. 7009. (7 October 2004), pp. 645-646.
    by Linda Keeling, Leif Andersson, Karin E Schutz, Susanne Kerje, Robert Fredriksson, Orjan Carlborg, Charles K Cornwallis, Tommaso Pizzari, Per Jensen
    posted to miqas qtl by jandot on 2008-08-22 15:42:55 as **
  • Quantitative trait locus detection in commercial broiler lines using candidate regions
    Journal of Animal Science, Vol. 81, No. 5. (1 May 2003), pp. 1158-1165.
    by DJ de Koning, D Windsor, PM Hocking, DW Burt, A Law, CS Haley, A Morris, J Vincent, H Griffin
    posted to miqas qtl by jandot on 2008-08-22 15:41:48 as **
  • Simultaneous mapping of epistatic QTL in chickens reveals clusters of QTL pairs with similar genetic effects on growth
    Genetical Research, Vol. 83, No. 3. (June 2004), pp. 197-209.
    by O Carlborg, PM Hocking, DW Burt, CS Haley
    posted to miqas qtl by jandot on 2008-08-22 15:41:06 as **
  • Genetic mapping of the QTL affecting body weight in chickens using a F2 family
    British Poultry Science, Vol. 42, No. 3. (2001), pp. 333-337.
    by K Tatsuda, K Fujinaka
    posted to miqas qtl by jandot on 2008-08-22 15:39:04 as **
  • Quantitative trait loci affecting fatness in the chicken
    Animal Genetics, Vol. 33, No. 6. (2002), pp. 428-435.
    by CON Ikeobi, JA Woolliams, DR Morrice, A Law, D Windsor, DW Burt, PM Hocking
    posted to miqas qtl by jandot on 2008-08-22 15:37:24 as **
  • Muscle-related traits in cattle: The role of the myostatin gene in the South Devon breed
    Genetics Selection Evolution, Vol. 34 (2002), pp. 221-232.
    by Pamela Wiener, Judith A Smith, Alyson M Lewis, John A Woolliams, John L Williams
    posted to miqas qtl by jandot on 2008-08-22 15:36:44 as **
  • Mutations in myostatin (GDF8) in Double-Muscled Belgian Blue and Piedmontese Cattle
    Genome Research, Vol. 7, No. 9. (September 1997), pp. 910-915.
    by Ravi Kambadur, Mridula Sharma, Timothy P Smith, John J Bass
    posted to miqas qtl by jandot on 2008-08-22 15:34:38 as **
  • The genetic architecture of quantitative traits.
    Annual Review of Genetics, Vol. 35 (2001), pp. 303-339.
    by TF Mackay
    posted to miqas qtl review by jandot on 2008-08-22 15:31:53 as ** along with 4 people maren RMGraze larios raiyar
  • The nature and identification of quantitative trait loci: a community's view
    Nature Reviews Genetics, Vol. 4, No. 11. (November 2003), pp. 911-916.
    by Complex Trait Consortium
    posted to miqas qtl review by jandot on 2008-08-22 15:30:19 as **
  • Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results.
    Nature Genetics, Vol. 11, No. 3. (November 1995), pp. 241-247.
    by E Lander, L Kruglyak
    posted to guidelines miqas qtl by jandot on 2008-08-22 15:29:32 as ** along with 1 person Ayest
  • Review of statistical methods for QTL mapping in experimental crosses
    Laboratory Animals, Vol. 30, No. 7. (2001), pp. 44-52.
    by KW Broman
    posted to miqas qtl by jandot on 2008-08-22 15:27:38 as **
  • Genomewide rapid association using mixed model and regression: a fast and simple method for genomewide pedigree-based quantitative trait loci association analysis.
    Genetics, Vol. 177, No. 1. (September 2007), pp. 577-585.
    by YS Aulchenko, DJ de Koning, C Haley
    posted to association miqas qtl by jandot on 2008-08-22 15:21:53 as ** along with 1 person jyuh
  • Family-based designs in the age of large-scale gene-association studies
    Nature Reviews Genetics, Vol. 7, No. 5., pp. 385-394.
    by Nan M Laird, Christoph Lange
    posted to association miqas qtl by jandot on 2008-08-22 15:21:18 as ** along with 3 people and 1 group jyuh oilcan cgreal CGREL
  • Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    Nature, Vol. 447, No. 7145. (7 June 2007), pp. 661-678.
    by The Wellcome Trust Case Control Consortium
    posted to association miqas wtccc by jandot on 2008-08-22 15:19:39 as ** along with 25 people and 3 groups lkolodziej xingxu raistrick jyuh jfr yas hpiwowar larios vplagnol frohike qmwwallace joepickrell massivemayhem Garamonfok PredictER hms jo_davies psique caseybrown mcgannd raiyar ramensky wenhui balicea mfm11 Bioinformatics T_lab parkinson's disease references
  • A General Population-Genetic Model for the Production by Population Structure of Spurious Genotype-Phenotype Associations in Discrete, Admixed or Spatially Distributed Populations
    Genetics, Vol. 173, No. 3. (1 July 2006), pp. 1665-1678.
    by Noah A Rosenberg, Magnus Nordborg
    posted to miqas by jandot on 2008-08-22 15:18:37 as ** along with 1 person and 1 group stevanspringer FAB-lab
  • A unified mixed-model method for association mapping that accounts for multiple levels of relatedness
    Nature Genetics, Vol. 38, No. 2. (25 December 2005), pp. 203-208.
    by Jianming Yu, Gael Pressoir, William H Briggs, Irie V Bi, Masanori Yamasaki, John F Doebley, Michael D Mcmullen, Brandon S Gaut, Dahlia M Nielsen, James B Holland, Stephen Kresovich, Edward S Buckler
    posted to association miqas by jandot on 2008-08-22 15:17:51 as read along with 3 people jyuh oilcan Ayest
  • An Arabidopsis Example of Association Mapping in Structured Samples
    PLoS Genetics, Vol. 3, No. 1. (1 January 2007), e4.
    by Keyan Zhao, María J Aranzana, Sung Kim, Clare Lister, Chikako Shindo, Chunlao Tang, Christopher Toomajian, Honggang Zheng, Caroline Dean, Paul Marjoram, Magnus Nordborg
    posted to association miqas by jandot on 2008-08-22 15:17:09 as read
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