Регистрация | Вход в службу | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

jfr Kim [40 articles]

Recent papers posted to jfr library by the author Kim. You can also see Kim everyone.
  • A gene sets approach for identifying prognostic gene signatures for outcome prediction
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Seon Y Kim, Yong S Kim
    posted to prognosis meta-analysis gene_set_analysis breast_cancer by jfr on 2008-09-04 10:05:06 as *** along with 3 people barriot srp33 ptrobajo
  • Biomarker discovery for colon cancer using a 761 gene RT-PCR assay
    BMC Genomics, Vol. 8 (15 August 2007), 279.
    by Kim M Clark-Langone, Jenny Y Wu, Chithra Sangli, Angela Chen, James L Snable, Anhthu Nguyen, James R Hackett, Joffre Baker, Greg Yothers, Chungyeul Kim, Maureen T Cronin
    posted to classification colon_cancer rt-pcr by jfr on 2008-08-05 17:35:59 as **** along with 1 person jyuh
  • Genome-wide promoter analysis uncovers portions of the cancer methylome.
    Cancer research, Vol. 68, No. 8. (15 April 2008), pp. 2661-2670.
    by MO Hoque, MS Kim, KL Ostrow, J Liu, GB Wisman, HL Park, ML Poeta, C Jeronimo, R Henrique, A Lendvai, E Schuuring, S Begum, E Rosenbaum, M Ongenaert, K Yamashita, J Califano, W Westra, AG van der Zee, W Van Criekinge, D Sidransky
    posted to methylation by jfr on 2008-06-17 18:00:18 as ***
  • Microarray data mining using landmark gene-guided clustering
    BMC Bioinformatics, Vol. 9 (11 February 2008), 92.
    by Pankaj Chopra, Jaewoo Kang, Jiong Yang, Hyungjun Cho, Heenam S Kim, Min-Goo Lee
    posted to clustering microarray_analysis by jfr on 2008-06-17 16:55:08 as **** along with 1 person jyuh
  • Comprehensive assessment of DNA copy number alterations in human prostate cancers using Affymetrix 100K SNP mapping array.
    Genes, chromosomes & cancer, Vol. 45, No. 11. (November 2006), pp. 1018-1032.
    by W Liu, B Chang, J Sauvageot, L Dimitrov, M Gielzak, T Li, G Yan, J Sun, J Sun, TS Adams, AR Turner, JW Kim, DA Meyers, SL Zheng, WB Isaacs, J Xu
    posted to copy-number snp-arrays by jfr on 2008-06-11 09:02:04 as read
  • Effects of dependence in high-dimensional multiple testing problems
    BMC Bioinformatics, Vol. 9 (25 February 2008), 114.
    by Kyung I Kim, Mark A van de Wiel
    posted to fdr multiple_testing by jfr on 2008-04-30 18:21:51 as ** along with 3 people jyuh shigepong barriot
  • Estimating the False Discovery Rate Using Nonparametric Deconvolution
    Biometrics, Vol. 63, No. 3. (September 2007), pp. 806-815.
    by Van de Wiel, A Mark, In Kim, Kyung
    posted to fdr statistics by jfr on 2008-04-17 14:13:34 as ** along with 1 person jyuh
  • BioLattice: a framework for the biological interpretation of microarray gene expression data using concept lattice analysis.
    Journal of biomedical informatics, Vol. 41, No. 2. (April 2008), pp. 232-241.
    by J Kim, HJ Chung, Y Jung, KK Kim, JH Kim
    posted to visualization by jfr on 2008-04-14 11:34:17 as ** along with 1 person jyuh
  • miRGator: an integrated system for functional annotation of microRNAs.
    Nucleic Acids Res (16 October 2007)
    by Seungyoon Nam, Bumjin Kim, Seokmin Shin, Sanghyuk Lee
    posted to database mirna resource by jfr on 2008-04-09 14:28:06 as read along with 2 people ealloza maralena
  • Allelic loss of chromosome 18q and prognosis in colorectal cancer.
    N Engl J Med, Vol. 331, No. 4. (28 July 1994), pp. 213-221.
    by J Jen, H Kim, S Piantadosi, ZF Liu, RC Levitt, P Sistonen, KW Kinzler, B Vogelstein, SR Hamilton
    posted to 18q_loh colon_cancer prognosis by jfr on 2008-02-20 12:51:33 as read
  • Chromosomal imbalances in the colorectal carcinomas with microsatellite instability.
    Am J Pathol, Vol. 163, No. 4. (October 2003), pp. 1429-1436.
    by LS Li, NG Kim, SH Kim, C Park, H Kim, HJ Kang, KH Koh, SN Kim, WH Kim, NK Kim, H Kim
    posted to colon_cancer copy-number msi by jfr on 2008-02-13 17:05:19 as **
  • Whole genome analysis for liver metastasis gene signatures in colorectal cancer.
    Int J Cancer, Vol. 121, No. 9. (1 November 2007), pp. 2005-2012.
    by DH Ki, HC Jeung, CH Park, SH Kang, GY Lee, WS Lee, NK Kim, HC Chung, SY Rha
    posted to colon_cancer gene_expression metastasis by jfr on 2008-02-13 13:48:25 as **
  • Oligonucleotide microarray analysis of distinct gene expression patterns in colorectal cancer tissues harboring BRAF and K-ras mutations
    Carcinogenesis, Vol. 27, No. 3. (March 2006), pp. 392-404.
    by Il-Jin Kim, Hio C Kang, Kun Kim, Sun-A Ahn, Hyun-Ju Yoon, Sang N Yoon, Jae-Gahb Park
    posted to colon_cancer gene_expression by jfr on 2008-02-12 16:05:33 as **
  • A Gene Expression Signature of Genetic Instability in Colon Cancer
    Cancer Res, Vol. 65, No. 20. (15 October 2005), pp. 9200-9205.
    by Craig P Giacomini, Suet Y Leung, Xin Chen, Siu T Yuen, Young H Kim, Eric Bair, Jonathan R Pollack
    posted to colon_cancer gene_expression msi by jfr on 2008-02-11 11:59:18 as read along with 2 people jen_drake cpnP
  • Clustering of change patterns using Fourier coefficients
    Bioinformatics, Vol. 24, No. 2. (15 January 2008), pp. 184-191.
    by Jaehee Kim, Haseong Kim
    posted to clustering by jfr on 2008-02-06 13:23:37 as ** along with 2 people jyuh dps
  • Inferring biological functions and associated transcriptional regulators using gene set expression coherence analysis
    BMC Bioinformatics, Vol. 8 (17 November 2007), 453.
    by Tae-Min Kim, Yeun-Jun Chung, Mun-Gan Rhyu, Myeong H Jung
    posted to module_detection regulation by jfr on 2008-02-06 13:12:52 as ** along with 2 people ealloza heliopais
  • Integrative genomic approaches identify IKBKE as a breast cancer oncogene.
    Cell, Vol. 129, No. 6. (15 June 2007), pp. 1065-1079.
    by JS Boehm, JJ Zhao, J Yao, SY Kim, R Firestein, IF Dunn, SK Sjostrom, LA Garraway, S Weremowicz, AL Richardson, H Greulich, CJ Stewart, LA Mulvey, RR Shen, L Ambrogio, T Hirozane-Kishikawa, DE Hill, M Vidal, M Meyerson, JK Grenier, G Hinkle, DE Root, TM Roberts, ES Lander, K Polyak, WC Hahn
    posted to breast_cancer by jfr on 2008-02-04 11:39:40 as *** along with 2 people and 2 groups jyuh dejori ic4 generif_paper
  • GAzer: gene set analyzer.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1697-1699.
    by SB Kim, S Yang, SK Kim, SC Kim, HG Woo, DJ Volsky, SY Kim, IS Chu
    posted to gene_set_analysis software by jfr on 2008-01-23 15:28:01 as * along with 1 person jyuh
  • Genome-wide combination profiling of copy number and methylation offers an approach for deciphering misregulation and development in cancer cells.
    Gene, Vol. 407, No. 1-2. (15 January 2008), pp. 139-147.
    by JJ Park, JK Kang, S Hong, ES Ryu, JI Kim, JH Lee, JS Seo
    posted to copy-number integration methylation by jfr on 2007-12-19 09:26:11 as read
  • Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome.
    Science (27 September 2007)
    by Jan O O Korbel, Alexander Eckehart E Urban, Jason P P Affourtit, Brian Godwin, Fabian Grubert, Jan Fredrik F Simons, Philip M M Kim, Dean Palejev, Nicholas J J Carriero, Lei Du, Bruce E E Taillon, Zhoutao Chen, Andrea Tanzer, A C Eugenia C Saunders, Jianxiang Chi, Fengtang Yang, Nigel P P Carter, Matthew E E Hurles, Sherman M M Weissman, Timothy T T Harkins, Mark B B Gerstein, Michael Egholm, Michael Snyder
    posted to cnv copy-number genomics by jfr on 2007-12-17 12:01:03 as read along with 9 people and 1 group dpollard dchughes AaronDarling rdiaz giovanni jlangdon annacarina07 Neeperando caseybrown EisenLab
  • Novel and simple transformation algorithm for combining microarray data sets
    BMC Bioinformatics, Vol. 8 (25 June 2007), 218.
    by Ki-Yeol Kim, Dong H Ki, Ha J Jeong, Hei-Cheul Jeung, Hyun C Chung, Sun Y Rha
    posted to integration meta-analysis by jfr on 2007-12-03 11:12:23 as *** along with 4 people jyuh shigepong fmenolascina GeeSharpMinor
  • An adaptive alpha spending algorithm improves the power of statistical inference in microarray data analysis.
    Bioinformation, Vol. 1, No. 10. (2007), pp. 384-389.
    by JP Brand, L Chen, X Cui, AA Bartolucci, GP Page, K Kim, S Barnes, V Srinivasasainagendra, MT Beasley, DB Allison
    posted to fdr feature_selection statistics by jfr on 2007-09-04 17:15:39 as *
  • Subsystem identification through dimensionality reduction of large-scale gene expression data.
    Genome Res, Vol. 13, No. 7. (July 2003), pp. 1706-1718.
    by PM Kim, B Tidor
    posted to clustering nmf by jfr on 2007-07-23 18:31:27 as ** along with 2 people yama_tah pliz
  • Mediators of vascular remodelling co-opted for sequential steps in lung metastasis
    Nature, Vol. 446, No. 7137., pp. 765-770.
    by Gaorav P Gupta, Don X Nguyen, Anne C Chiang, Paula D Bos, Juliet Y Kim, Cristina Nadal, Roger R Gomis, Katia Manova-Todorova, Joan Massagué
    posted to breast_cancer metastasis by jfr on 2007-07-11 13:05:53 as ** along with 1 person and 1 group stevezhang SGMO_ZFP
  • Error-pooling-based statistical methods for identifying novel temporal replication profiles of human chromosomes observed by DNA tiling arrays.
    Nucleic Acids Res, Vol. 35, No. 9. (2007)
    by T Park, Y Kim, S Bekiranov, JK Lee
    posted to tiling_array by jfr on 2007-07-10 17:09:26 as **
  • Towards clustering of incomplete microarray data without the use of imputation.
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 107-113.
    by DW Kim, KY Lee, KH Lee, D Lee
    posted to clustering methodology missing_values by jfr on 2007-06-08 16:42:11 as ** along with 1 person jyuh
  • The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e59.
    by Haiyuan Yu, Philip M Kim, Emmett Sprecher, Valery Trifonov, Mark Gerstein
    posted to network systems_biology by jfr on 2007-05-29 17:32:19 as **** along with 4 people zwang Takayuki hryk carlk
  • Gene expression and benefit of chemotherapy in women with node-negative, estrogen receptor-positive breast cancer.
    J Clin Oncol, Vol. 24, No. 23. (10 August 2006), pp. 3726-3734.
    by S Paik, G Tang, S Shak, C Kim, J Baker, W Kim, M Cronin, FL Baehner, D Watson, J Bryant, JP Costantino, CE Geyer, DL Wickerham, N Wolmark
    posted to breast_cancer tamoxifen by jfr on 2007-05-11 14:47:24 as **
  • A genome-wide screen for promoter methylation in lung cancer identifies novel methylation markers for multiple malignancies.
    PLoS Med, Vol. 3, No. 12. (December 2006)
    by DS Shames, L Girard, B Gao, M Sato, CM Lewis, N Shivapurkar, A Jiang, CM Perou, YH Kim, JR Pollack, KM Fong, CL Lam, M Wong, Y Shyr, R Nanda, OI Olopade, W Gerald, DM Euhus, JW Shay, AF Gazdar, JD Minna
    posted to methylation by jfr on 2007-05-10 16:56:30 as ** along with 2 people epigenetics blackm0k
  • Effects of HER2 overexpression on cell signaling networks governing proliferation and migration
    Mol Syst Biol, Vol. 2 (3 October 2006)
    by Alejandro Wolf-Yadlin, Neil Kumar, Yi Zhang, Sampsa Hautaniemi, Muhammad Zaman, Hyung-Do Kim, Viara Grantcharova, Douglas A Lauffenburger, Forest M White
    posted to erbb by jfr on 2007-03-23 14:34:44 as *** along with 3 people and 1 group balabu cdppublications pjasper CDP
  • Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer.
    Genes Chromosomes Cancer, Vol. 45, No. 11. (November 2006), pp. 1033-1040.
    by A Bergamaschi, YH Kim, P Wang, T Sørlie, T Hernandez-Boussard, PE Lonning, R Tibshirani, AL Børresen-Dale, JR Pollack
    posted to array-cgh breast_cancer copy-number subtypes by jfr on 2007-03-09 17:19:07 as **** along with 4 people frohike srp33 rdiaz emb51
  • Prevention of Brca1-mediated mammary tumorigenesis in mice by a progesterone antagonist.
    Science, Vol. 314, No. 5804. (1 December 2006), pp. 1467-1470.
    by AJ Poole, Y Li, Y Kim, SC Lin, WH Lee, EY Lee
    posted to brca breast_cancer by jfr on 2007-03-01 11:48:08 as **
  • NCBI GEO: mining tens of millions of expression profiles--database and tools update.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by T Barrett, DB Troup, SE Wilhite, P Ledoux, D Rudnev, C Evangelista, IF Kim, A Soboleva, M Tomashevsky, R Edgar
    posted to software by jfr on 2007-01-11 14:49:09 as * along with 6 people jyuh balajis hpiwowar incovoma pziarsolo tvdbulck
  • Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data
    BMC Bioinformatics, Vol. 7 (04 July 2006), 330.
    by Seon-Young Kim, Yongsung Kim
    posted to tfbs regulation methodology integration by jfr on 2007-01-11 14:12:54 as * along with 2 people xwbcn Ao_Li2007
  • The ASAP II database: analysis and comparative genomics of alternative splicing in 15 animal species.
    Nucleic Acids Res (15 November 2006)
    by Namshin Kim, Alexander V V Alekseyenko, Meenakshi Roy, Christopher Lee
    posted to software by jfr on 2007-01-11 14:00:47 as * along with 1 person Ayest
  • A high-resolution map of active promoters in the human genome
    Nature (29 June 2005)
    by Tae H Kim, Leah O Barrera, Ming Zheng, Chunxu Qu, Michael A Singer, Todd A Richmond, Yingnian Wu, Roland D Green, Bing Ren
    posted to promoters genomics by jfr on 2007-01-11 13:50:10 as * along with 6 people and 1 group imouthesmp okarsligil tuck balicea sebastien_vigneau olympos Bioinformatics
  • Generalization of DNA microarray dispersion properties: microarray equivalent of t-distribution
    Biology Direct, Vol. 1 (07 September 2006), 27.
    by Jaroslav P Novak, Seon-Young Kim, Jun Xu, Olga Modlich, David J Volsky, David Honys, Joan L Slonczewski, Douglas A Bell, Fred R Blattner, Eduardo Blumwald, Marjan Boerma, Manuel Cosio, Zoran Gatalica, Marian Hajduch, Juan Hidalgo, Roderick R Mcinnes, Merrill C Miller, Milena Penkowa, Michael S Rolph, Jordan Sottosanto, Rene St-Arnaud, Michael J Szego, David Twell, Charles Wang
    posted to microarray_technology evaluation by jfr on 2007-01-10 14:34:33 as **
  • Differential coexpression analysis using microarray data and its application to human cancer
    Bioinformatics, Vol. 21, No. 24. (15 December 2005), pp. 4348-4355.
    by Jung K Choi, Ungsik Yu, Ook J Yoo, Sangsoo Kim
    posted to co-expression by jfr on 2007-01-10 12:04:21 as **** along with 2 people dragonrez gabe_rosser
  • miTarget: microRNA target-gene prediction using a Support Vector Machine
    BMC Bioinformatics, Vol. 7 (18 September 2006), 411.
    by Sung-Kyu Kim, Jin-Wu Nam, Je-Keun Rhee, Wha-Jin Lee, Byoung-Tak Zhang
    posted to mirna mirna_target software by jfr on 2006-11-08 14:17:18 as read along with 3 people and 1 group tardigrade heliopais maralena microRNA
  • A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies
    Nature Biotechnology, Vol. 24, No. 7. (02 July 2006), pp. 832-840.
    by Winston P Kuo, Fang Liu, Jeff Trimarchi, Claudio Punzo, Michael Lombardi, Jasjit Sarang, Mark E Whipple, Malini Maysuria, Kyle Serikawa, Sun Y Lee, Donald Mccrann, Jason Kang, Jeffrey R Shearstone, Jocelyn Burke, Daniel J Park, Xiaowei Wang, Trent L Rector, Paola Ricciardi-Castagnoli, Steven Perrin, Sangdun Choi, Roger Bumgarner, Ju H Kim, Glenn F Short, Mason W Freeman, Brian Seed, Roderick Jensen, George M Church, Eivind Hovig, Connie L Cepko, Peter Park, Lucila Ohno-Machado, Tor-Kristian Jenssen
    posted to annotation by jfr on 2006-11-06 16:02:21 as ** along with 2 people and 2 groups dchughes stsaft G4ID Genetics-of-Gambling
    • Вы можете ссылаться на эту страницу по адресу: http://www.citeulike.org/user/jfr/author/Kim

    RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.