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jfr breast_cancer [305 articles]

Recent papers added to jfr library classified by the tag breast_cancer. You can also see everyone's breast_cancer.
  • Molecular signatures predict outcomes of breast cancer.
    The New England journal of medicine, Vol. 355, No. 6. (10 August 2006), pp. 615-617.
    by JA O'Shaughnessy
    posted to comparison comment classification breast_cancer by jfr on 2008-07-23 10:01:32 as read
  • Gene-expression profiling in breast cancer.
    Lancet, Vol. 365, No. 9460. (5 2005), pp. 634-635.
    by TK Jenssen, E Hovig
    posted to comment breast_cancer by jfr on 2008-07-21 18:17:43 as read
  • Individualized care for patients with cancer - a work in progress.
    The New England journal of medicine, Vol. 351, No. 27. (30 December 2004), pp. 2865-2867.
    by RC Bast, GN Hortobagyi
    posted to therapy rt-pcr comment breast_cancer by jfr on 2008-07-21 18:11:16 as read
  • Technology insight: Emerging techniques to predict response to preoperative chemotherapy in breast cancer.
    Nature clinical practice. Oncology, Vol. 1, No. 1. (November 2004), pp. 44-50.
    by L Pusztai, L Gianni
    posted to therapy review microarray_technology gene_expression breast_cancer by jfr on 2008-07-21 18:08:40 as read
  • Trawling for genes that predict response to breast cancer adjuvant therapy.
    Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 22, No. 12. (15 June 2004), pp. 2267-2269.
    by M Ellis, K Ballman
    posted to therapy comment breast_cancer by jfr on 2008-07-21 18:04:37 as read
  • Clinical trial design for microarray predictive marker discovery and assessment.
    Ann Oncol, Vol. 15, No. 12. (December 2004), pp. 1731-1737.
    by L Pusztai, KR Hess
    posted to trial review breast_cancer by jfr on 2008-07-17 17:38:52 as ** along with 2 people and 1 group jeremymiller lauracorrigan GeschwindLab
  • Identification of cancer genes using a statistical framework for multiexperiment analysis of nondiscretized array CGH data.
    Nucleic acids research, Vol. 36, No. 2. (February 2008)
    by C Klijn, H Holstege, J de Ridder, X Liu, M Reinders, J Jonkers, L Wessels
    posted to breast_cancer bioinformatics array-cgh by jfr on 2008-07-10 17:03:13 as ****
  • Small is beautiful: microRNAs and breast cancer-where are we now?
    The Journal of pathology, Vol. 215, No. 3. (July 2008), pp. 214-221.
    by E Verghese, A Hanby, V Speirs, T Hughes
    posted to review mirna breast_cancer by jfr on 2008-06-27 09:09:35 as **
  • Visualizing chromosomes as transcriptome correlation maps: evidence of chromosomal domains containing co-expressed genes--a study of 130 invasive ductal breast carcinomas.
    Cancer research, Vol. 65, No. 4. (15 February 2005), pp. 1376-1383.
    by F Reyal, N Stransky, I Bernard-Pierrot, A Vincent-Salomon, Y de Rycke, P Elvin, A Cassidy, A Graham, C Spraggon, Y Désille, A Fourquet, C Nos, P Pouillart, H Magdelénat, D Stoppa-Lyonnet, J Couturier, B Sigal-Zafrani, B Asselain, X Sastre-Garau, O Delattre, JP Thiery, F Radvanyi
    posted to integration gene_expression copy-number breast_cancer by jfr on 2008-06-17 12:04:03 as ***
  • Current Status of Prognostic Profiling in Breast Cancer
    Oncologist, Vol. 13, No. 4. (1 April 2008), pp. 350-360.
    by Lajos Pusztai
    posted to review prognostic breast_cancer by jfr on 2008-06-13 16:35:57 as read along with 1 person jo_davies
  • Patterns and changes in gene expression following neo-adjuvant anti-estrogen treatment in estrogen receptor-positive breast cancer.
    Endocrine-related cancer, Vol. 15, No. 2. (June 2008), pp. 439-449.
    by Vera Cappelletti, Manuela Gariboldi, Loris De Cecco, Sara Toffanin, James F F Reid, Lara Lusa, Emilio Bajetta, Luigi Celio, Marco Greco, Alessandra Fabbri, Marco A A Pierotti, Maria Grazia G Daidone
    posted to jfrbib breast_cancer by jfr on 2008-06-09 13:33:33 as read
  • Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen
    BMC Genomics, Vol. 9 (22 May 2008), 239.
    by Sherene Loi, Benjamin Haibe-Kains, Christine Desmedt, Pratyaksha Wirapati, Francoise Lallemand, Andrew M Tutt, Cheryl Gillet, Paul Ellis, Kenneth Ryder, James Reid, Maria G Daidone, Marco A Pierotti, Els MJJ Berns, Maurice PHM Jansen, John A Foekens, Mauro Delorenzi, Gianluca Bontempi, Martine J Piccart, Christos Sotiriou
    posted to tamoxifen jfrbib classification breast_cancer by jfr on 2008-06-09 12:41:38 as read
  • Gene expression signatures, clinicopathological features, and individualized therapy in breast cancer.
    JAMA : the journal of the American Medical Association, Vol. 299, No. 13. (2 April 2008), pp. 1574-1587.
    by CR Acharya, DS Hsu, CK Anders, A Anguiano, KH Salter, KS Walters, RC Redman, SA Tuchman, CA Moylan, S Mukherjee, WT Barry, HK Dressman, GS Ginsburg, KP Marcom, KS Garman, GH Lyman, JR Nevins, A Potti
    posted to therapy gene_expression classification breast_cancer bio_signature by jfr on 2008-05-16 10:17:02 as read along with 1 person jyuh
  • Sorting Out Breast-Cancer Gene Signatures
    N Engl J Med, Vol. 356, No. 3. (18 January 2007), pp. 294-297.
    by Joan Massague
    posted to editorial breast_cancer by jfr on 2008-04-30 10:13:49 as read along with 1 person srp33
  • Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate regulation
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by David Smith, Pal Saetrom, Ola Snove, Cathryn Lundberg, Guillermo Rivas, Carlotta Glackin, Garrett Larson
    posted to tfbs meta-analysis gene_expression estrogen breast_cancer by jfr on 2008-04-29 15:22:53 as read along with 3 people and 1 group shigepong heliopais xili03 microRNA
  • Sixteen-kinase gene expression identifies luminal breast cancers with poor prognosis.
    Cancer research, Vol. 68, No. 3. (1 February 2008), pp. 767-776.
    by P Finetti, N Cervera, E Charafe-Jauffret, C Chabannon, C Charpin, M Chaffanet, J Jacquemier, P Viens, D Birnbaum, F Bertucci
    posted to breast_cancer gene_expression by jfr on 2008-04-22 08:48:40 as **
  • Clinical application of the 70-gene profile: the MINDACT trial.
    Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 26, No. 5. (10 February 2008), pp. 729-735.
    by F Cardoso, L Van't Veer, E Rutgers, S Loi, S Mook, MJ Piccart-Gebhart
    posted to breast_cancer classification prognosis trial by jfr on 2008-04-22 08:45:00 as ***
  • The prognostic biomarkers HOXB13, IL17BR, and CHDH are regulated by estrogen in breast cancer.
    Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 13, No. 21. (1 November 2007), pp. 6327-6334.
    by Z Wang, S Dahiya, H Provencher, B Muir, E Carney, K Coser, T Shioda, XJ Ma, DC Sgroi
    posted to breast_cancer marker rt-pcr tamoxifen treatment by jfr on 2008-04-22 08:37:59 as read
  • Prediction of breast cancer prognosis by gene expression profile of TP53 status.
    Cancer science, Vol. 99, No. 2. (February 2008), pp. 324-332.
    by S Takahashi, T Moriya, T Ishida, H Shibata, H Sasano, N Ohuchi, C Ishioka
    posted to breast_cancer gene_expression p53 prognosis by jfr on 2008-04-17 14:10:49 as ***
  • Poor outcome in estrogen receptor-positive breast cancers predicted by loss of plexin B1.
    Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 13, No. 4. (15 February 2007), pp. 1115-1122.
    by A Rody, U Holtrich, R Gaetje, M Gehrmann, K Engels, G von Minckwitz, S Loibl, R Diallo-Danebrock, E Ruckhäberle, D Metzler, A Ahr, C Solbach, T Karn, M Kaufmann
    posted to breast_cancer gene_expression by jfr on 2008-04-16 17:53:50 as **
  • Gene expression profiling and clinical outcome in breast cancer.
    Omics : a journal of integrative biology, Vol. 10, No. 4. (2006), pp. 429-443.
    by F Bertucci, P Finetti, N Cervera, D Maraninchi, P Viens, D Birnbaum
    posted to breast_cancer gene_expression review by jfr on 2008-04-15 11:39:32 as **
  • Molecular signatures of neoadjuvant endocrine therapy for breast cancer: characteristics of response or intrinsic resistance.
    Breast cancer research and treatment (9 March 2008)
    by Djuana M Harvell, Nicole S Spoelstra, Meenakshi Singh, James L McManaman, Christina Finlayson, Tzu Phang, Susan Trapp, Lawrence Hunter, Wendy W Dye, Virginia F Borges, Anthony Elias, Kathryn B Horwitz, Jennifer K Richer
    posted to breast_cancer classification therapy by jfr on 2008-04-14 16:48:35 as **
  • Triple negative tumours: a critical review
    Histopathology, Vol. 52, No. 1. (January 2008), pp. 108-118.
    by Reis-Filho, , Tutt,
    posted to breast_cancer review by jfr on 2008-04-14 16:34:00 as **
  • Endogenous human microRNAs that suppress breast cancer metastasis
    Nature, Vol. 451, No. 7175., pp. 147-152.
    by Sohail F Tavazoie, Claudio Alarcón, Thordur Oskarsson, David Padua, Qiongqing Wang, Paula D Bos, William L Gerald, Joan Massagué
    posted to breast_cancer metastasis mirna by jfr on 2008-04-11 16:27:07 as *** along with 3 people and 1 group heliopais mtagaya lp2 microRNA
  • Systematic review: gene expression profiling assays in early-stage breast cancer.
    Ann Intern Med, Vol. 148, No. 5. (4 March 2008), pp. 358-369.
    by L Marchionni, RF Wilson, AC Wolff, S Marinopoulos, G Parmigiani, EB Bass, SN Goodman
    posted to breast_cancer classification gene_expression review by jfr on 2008-04-09 14:25:05 as read along with 1 person jyuh
  • Use of 70-gene signature to predict prognosis of patients with node-negative breast cancer: a prospective community-based feasibility study (RASTER).
    Lancet Oncol, Vol. 8, No. 12. (December 2007), pp. 1079-1087.
    by JM Bueno-de-Mesquita, WH van Harten, VP Retel, LJ van't Veer, FS van Dam, K Karsenberg, KF Douma, H van Tinteren, JL Peterse, J Wesseling, TS Wu, D Atsma, EJ Rutgers, G Brink, AN Floore, AM Glas, RM Roumen, FE Bellot, C van Krimpen, S Rodenhuis, MJ van de Vijver, SC Linn
    posted to breast_cancer gene_expression prognosis by jfr on 2008-04-09 14:11:34 as ** along with 2 people ptrobajo frohike
  • Decoding the fine-scale structure of a breast cancer genome and transcriptome
    Genome Res., Vol. 16, No. 3. (1 March 2006), pp. 394-404.
    by Stanislav Volik, Benjamin J Raphael, Guiqing Huang, Michael R Stratton, Graham Bignel, John Murnane, John H Brebner, Krystyna Bajsarowicz, Pamela L Paris, Quanzhou Tao, David Kowbel, Anna Lapuk, Dmitri A Shagin, Irina A Shagina, Joe W Gray, Jan-Fang Cheng, Pieter J de Jong, Pavel Pevzner, Colin Collins
    posted to microarray_technology breast_cancer sequencing by jfr on 2008-04-09 13:11:05 as * along with 2 people tuck emb51
  • Integrative analysis of a cancer somatic mutome
    Molecular Cancer, Vol. 6 (05 February 2007), 13.
    by Pilar Hernandez, Xavier Sole, Joan Valls, Victor Moreno, Gabriel Capella, Ander Urruticoechea, Miguel A Pujana
    posted to breast_cancer copy-number gene_expression mutations by jfr on 2008-04-04 17:15:02 as read along with 1 person jjohnson17
  • Evaluation of oestrogen receptor expression in breast cancer by quantification of mRNA
    Histopathology, Vol. 51, No. 6. (December 2007), pp. 829-836.
    by Potemski, , Pluciennik, , Bednarek, , Kusinska, , Kubiak, , Kordek,
    posted to breast_cancer estrogen by jfr on 2008-02-06 13:22:24 as *
  • Ten genes for inherited breast cancer.
    Cancer Cell, Vol. 11, No. 2. (February 2007), pp. 103-105.
    by T Walsh, MC King
    posted to brca breast_cancer by jfr on 2008-02-06 11:45:57 as ** along with 3 people and 1 group MonkeyMan lilith jdiezperezj DNAGearHeads
  • Estrogen receptor alpha (ERalpha) mRNA copy numbers in immunohistochemically positive-, and negative breast cancer tissues
    BMC Cancer, Vol. 7 (28 March 2007), 56.
    by Indira Poola, Qingqi Yue
    posted to breast_cancer estrogen immunohistochemistry rt-pcr by jfr on 2008-02-05 11:46:15 as *
  • EGFR associated expression profiles vary with breast tumor subtype
    BMC Genomics, Vol. 8 (31 July 2007), 258.
    by Katherine A Hoadley, Victor J Weigman, Cheng Fan, Lynda R Sawyer, Xiaping He, Melissa A Troester, Carolyn I Sartor, Thais Rieger-House, Philip S Bernard, Lisa A Carey, Charles M Perou
    posted to breast_cancer egfr subtypes by jfr on 2008-02-05 11:28:33 as *
  • An immune response gene expression module identifies a good prognosis subtype in estrogen receptor negative breast cancer
    Genome Biology, Vol. 8 (02 August 2007), R157.
    by Andrew E Teschendorff, Ahmad Miremadi, Sarah E Pinder, Ian O Ellis, Carlos Caldas
    posted to breast_cancer estrogen by jfr on 2008-02-04 13:30:24 as **
  • Identification of aberrant chromosomal regions from gene expression microarray studies applied to human breast cancer
    Bioinformatics, Vol. 23, No. 17. (1 September 2007), pp. 2273-2280.
    by Andreas Buness, Ruprecht Kuner, Markus Ruschhaupt, Annemarie Poustka, Holger Sultmann, Achim Tresch
    posted to breast_cancer copy-number by jfr on 2008-02-04 11:48:00 as *** along with 2 people and 1 group rdiaz ealloza BioinfoCIPF
  • Integrative genomic approaches identify IKBKE as a breast cancer oncogene.
    Cell, Vol. 129, No. 6. (15 June 2007), pp. 1065-1079.
    by JS Boehm, JJ Zhao, J Yao, SY Kim, R Firestein, IF Dunn, SK Sjostrom, LA Garraway, S Weremowicz, AL Richardson, H Greulich, CJ Stewart, LA Mulvey, RR Shen, L Ambrogio, T Hirozane-Kishikawa, DE Hill, M Vidal, M Meyerson, JK Grenier, G Hinkle, DE Root, TM Roberts, ES Lander, K Polyak, WC Hahn
    posted to breast_cancer by jfr on 2008-02-04 11:39:40 as *** along with 2 people and 2 groups jyuh dejori ic4 generif_paper
  • High expression of lymphocyte-associated genes in node-negative HER2+ breast cancers correlates with lower recurrence rates.
    Cancer Res, Vol. 67, No. 22. (15 November 2007), pp. 10669-10676.
    by G Alexe, GS Dalgin, D Scanfeld, P Tamayo, JP Mesirov, C DeLisi, L Harris, N Barnard, M Martel, AJ Levine, S Ganesan, G Bhanot
    posted to erbb consensus_clustering breast_cancer by jfr on 2008-02-04 10:50:32 as read along with 1 person chrisamiller
  • Gene arrays for diagnosis, prognosis and treatment of breast cancer metastasis.
    Clin Exp Metastasis, Vol. 24, No. 8. (2007), pp. 575-585.
    by K Driouch, T Landemaine, S Sin, S Wang, R Lidereau
    posted to breast_cancer metastasis review by jfr on 2008-02-04 09:58:18 as **
  • Integrated analysis of independent gene expression microarray datasets improves the predictability of breast cancer outcome
    BMC Genomics, Vol. 8 (20 September 2007), 331.
    by Zhe Zhang, Dechang Chen, David A Fenstermacher
    posted to breast_cancer classification integration by jfr on 2008-02-04 09:31:53 as read
  • Network modeling links breast cancer susceptibility and centrosome dysfunction.
    Nat Genet (7 October 2007)
    by Miguel Angel A Pujana, Jing-Dong J D Han, Lea M M Starita, Kristen N N Stevens, Muneesh Tewari, Jin Sook S Ahn, Gad Rennert, Víctor Moreno, Tomas Kirchhoff, Bert Gold, Volker Assmann, Wael M M Elshamy, Jean-François F Rual, Douglas Levine, Laura S S Rozek, Rebecca S S Gelman, Kristin C C Gunsalus, Roger A A Greenberg, Bijan Sobhian, Nicolas Bertin, Kavitha Venkatesan, Nono Ayivi-Guedehoussou, Xavier Solé, Pilar Hernández, Conxi Lázaro, Katherine L L Nathanson, Barbara L L Weber, Michael E E Cusick, David E E Hill, Kenneth Offit, David M M Livingston, Stephen B B Gruber, Jeffrey D D Parvin, Marc Vidal
    posted to brca breast_cancer network by jfr on 2008-01-23 15:35:57 as read along with 6 people and 1 group chrisamiller ealloza cjeans nedwards jdiezperezj phoenixzxl BioinfoCIPF
  • Gene expression in 16q is associated with survival and differs between Sørlie breast cancer subtypes.
    Genes Chromosomes Cancer, Vol. 46, No. 1. (January 2007), pp. 87-97.
    by K Wennmalm, S Calza, A Ploner, P Hall, J Bjöhle, S Klaar, J Smeds, Y Pawitan, J Bergh
    posted to breast_cancer copy-number integration subtypes by jfr on 2008-01-23 15:16:18 as **
  • Increased expression of urokinase-type plasminogen activator mRNA determines adverse prognosis in ErbB2-positive primary breast cancer.
    J Clin Oncol, Vol. 24, No. 26. (10 September 2006), pp. 4245-4253.
    by P Urban, V Vuaroqueaux, M Labuhn, M Delorenzi, P Wirapati, E Wight, HJ Senn, C Benz, U Eppenberger, S Eppenberger-Castori
    posted to marker erbb breast_cancer by jfr on 2008-01-23 15:11:04 as *
  • The Genomic Landscapes of Human Breast and Colorectal Cancers.
    Science (11 October 2007)
    by Laura D D Wood, D Williams W Parsons, Siân Jones, Jimmy Lin, Tobias Sjöblom, Rebecca J J Leary, Dong Shen, Simina M M Boca, Thomas Barber, Janine Ptak, Natalie Silliman, Steve Szabo, Zoltan Dezso, Vadim Ustyanksky, Tatiana Nikolskaya, Yuri Nikolsky, Rachel Karchin, Paul A A Wilson, Joshua S S Kaminker, Zemin Zhang, Randal Croshaw, Joseph Willis, Dawn Dawson, Michail Shipitsin, James K V K Willson, Saraswati Sukumar, Kornelia Polyak, Ben Ho H Park, Charit L L Pethiyagoda, P V Krishna V Pant, Dennis G G Ballinger, Andrew B B Sparks, James Hartigan, Douglas R R Smith, Erick Suh, Nickolas Papadopoulos, Phillip Buckhaults, Sanford D D Markowitz, Giovanni Parmigiani, Kenneth W W Kinzler, Victor E E Velculescu, Bert Vogelstein
    posted to breast_cancer colon_cancer genomics mutations by jfr on 2008-01-23 14:47:37 as read along with 13 people and 1 group cerami gwenknight jyuh tmmurali rdiaz eisei ramensky massivemayhem bioyang cabbagezs xingxu shikin renatomilani VUMCGenomics
  • Module-based outcome prediction using breast cancer compendia.
    PLoS ONE, Vol. 2, No. 10. (2007)
    by MH van Vliet, CN Klijn, LF Wessels, MJ Reinders
    posted to meta-analysis breast_cancer network by jfr on 2007-12-18 13:02:32 as read along with 2 people macavity1g ptrobajo
  • Cytokeratin KRT8/18 expression differentiates distinct subtypes of grade 3 invasive ductal carcinoma of the breast.
    Cancer Genet Cytogenet, Vol. 178, No. 2. (15 October 2007), pp. 94-103.
    by LC Walker, GC Harris, AJ Holloway, GW McKenzie, JE Wells, BA Robinson, CM Morris
    posted to breast_cancer subtypes by jfr on 2007-12-17 12:21:50 as **
  • Molecular subtyping of breast cancer: opportunities for new therapeutic approaches.
    Cell Mol Life Sci (22 October 2007)
    by P B Mullan, R C Millikan
    posted to breast_cancer review subtypes therapy by jfr on 2007-12-17 12:20:27 as ****
  • Pharmacogenomic predictor discovery in phase II clinical trials for breast cancer.
    Clin Cancer Res, Vol. 13, No. 20. (15 October 2007), pp. 6080-6086.
    by L Pusztai, K Anderson, KR Hess
    posted to therapy erbb classification breast_cancer by jfr on 2007-12-17 12:16:16 as read
  • Network-based classification of breast cancer metastasis
    Mol Syst Biol, Vol. 3 (16 October 2007)
    by Han-Yu Chuang, Eunjung Lee, Yu-Tsueng Liu, Doheon Lee, Trey Ideker
    posted to breast_cancer classification network by jfr on 2007-12-17 12:07:52 as read along with 12 people and 2 groups kengg frohike mikaelhuss cjeans zwang cerami abhattac shikin oelemento roys ptrobajo dap5087 Bioinformatics GeneGo
  • MicroRNA expression profiling of human breast cancer identifies new markers of tumour subtype
    Genome Biology, Vol. 8 (08 October 2007), R214.
    by Cherie Blenkiron, Leonard D Goldstein, Natalie P Thorne, Inmaculada Spiteri, Suet-Feung Chin, Mark J Dunning, Nuno L Barbosa-Morais, Andrew E Teschendorff, Andrew R Green, Ian O Ellis, Simon Tavare, Carlos Caldas, Eric A Miska
    posted to subtypes breast_cancer mirna by jfr on 2007-12-07 17:53:45 as *** along with 3 people and 1 group giovenko ealloza heliopais microRNA
  • High-resolution array-CGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer
    Genome Biology, Vol. 8 (09 October 2007), R215.
    by Suet F Chin, Andrew E Teschendorff, John C Marioni, Yanzhong Wang, Nuno L Barbosa-Morais, Natalie P Thorne, Jose L Costa, Sarah E Pinder, Mark A van de Wiel, Andrew R Green, Ian O Ellis, Peggy L Porter, Simon Tavare, James D Brenton, Bauke Ylstra, Carlos Caldas
    posted to subtypes array-cgh breast_cancer estrogen by jfr on 2007-12-07 17:51:31 as *** along with 2 people chrisamiller rdiaz
  • Gene expression profiling and histopathological characterization of triple negative/basal-like breast carcinomas
    Breast Cancer Research, Vol. 9 (02 October 2007), R65.
    by Bas Kreike, Marieke van Kouwenhove, Hugo Horlings, Britta Weigelt, Harry Bartelink, Marc J Van de Vijver
    posted to basal_subtype breast_cancer by jfr on 2007-12-07 17:49:09 as *** along with 1 person debasis
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