Регистрация | Вход в службу | FAQ      [?] 
Recent | Unread | Search | Authors | Tags | Export

jfr pathway_analysis [33 articles]

Recent papers added to jfr library classified by the tag pathway_analysis. You can also see everyone's pathway_analysis.
  • Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via logistic mixed models
    BMC Bioinformatics, Vol. 9 (24 June 2008), 292.
    by Dawei Liu, Debashis Ghosh, Xihong Lin
    posted to pathway_analysis by jfr on 2008-09-26 16:19:49 as *** along with 2 people dolchan ptrobajo
  • Inferring differentiation pathways from gene expression.
    Bioinformatics (Oxford, England), Vol. 24, No. 13. (1 July 2008)
    by IG Costa, S Roepcke, C Hafemeister, A Schliep
    posted to pathway_analysis gene_set_analysis by jfr on 2008-09-26 10:56:15 as ** along with 1 person jyuh
  • Systematic reconstruction of TRANSPATH data into Cell System Markup Language
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Masao Nagasaki, Ayumu Saito, Chen Li, Euna Jeong, Satoru Miyano
    posted to systems_biology software pathway_analysis by jfr on 2008-09-24 13:49:23 as ** along with 3 people reyez bootsy JeremyZucker
  • Evaluation of biological pathways involved in chemotherapy response in breast cancer
    Breast Cancer Research, Vol. 10 (29 April 2008), R37.
    by Attila Tordai, Jing Wang, Fabrice Andre, Cornelia Liedtke, Kai Yan, Christos Sotiriou, Gabriel N Hortobagyi, Fraser W Symmans, Lajos Pusztai
    posted to therapy pathway_analysis breast_cancer by jfr on 2008-09-04 14:36:41 as read along with 1 person and 2 groups Zephyrus Breast Cancer Reading Club Breast cancer
  • An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer.
    BMC genomics, Vol. 9 Suppl 1 (2008)
    by M Xu, MC Kao, J Nunez-Iglesias, JR Nevins, M West, XJ Zhou
    posted to pathway_analysis integration breast_cancer by jfr on 2008-09-04 11:05:25 as ***** along with 3 people jyuh Zephyrus cswinburne
  • Pathway analysis of gene signatures predicting metastasis of node-negative primary breast cancer
    BMC Cancer, Vol. 7 (25 September 2007), 182.
    by Jack X Yu, Anieta M Sieuwerts, Yi Zhang, John WM Martens, Marcel Smid, Jan GM Klijn, Yixin Wang, John A Foekens
    posted to prognosis pathway_analysis gene_set_analysis breast_cancer by jfr on 2008-09-04 10:39:43 as *** along with 2 people and 1 group Zephyrus ealloza BioinfoCIPF
  • Modeling Cancer Progression via Pathway Dependencies.
    PLoS Comput Biol, Vol. 4, No. 2. (15 February 2008)
    by Elena J J Edelman, Justin Guinney, Jen-Tsan T Chi, Phillip G G Febbo, Sayan Mukherjee
    posted to model pathway_analysis progression by jfr on 2008-08-05 17:40:00 as **** along with 1 person bootsy
  • Linking oncogenic pathways with therapeutic opportunities
    Nature Reviews Cancer, Vol. 6, No. 9. (17 August 2006), pp. 735-741.
    by Andrea H Bild, Anil Potti, Joseph R Nevins
    posted to bio_signature classification pathway_analysis review therapy by jfr on 2008-07-22 10:21:29 as read along with 4 people aviad_work jackjackjjj frohike srp33
  • The use of logic relationships to model colon cancer gene expression networks with mRNA microarray data.
    Journal of biomedical informatics, Vol. 41, No. 4. (August 2008), pp. 530-543.
    by X Ruan, J Wang, H Li, RE Perozzi, EF Perozzi
    posted to colon_cancer gene_expression network pathway_analysis progression by jfr on 2008-07-17 14:36:18 as read along with 1 person balicea
  • Pathway Analysis of Microarray Data via Regression
    Journal of Computational Biology, Vol. 0, No. 0. (0), pp. 1-9.
    by AJ Adewale, I Dinu, JD Potter, Q Liu, Y Yasui
    posted to pathway_analysis by jfr on 2008-05-14 11:50:02 as ** along with 6 people tmmurali csgillespie huali heliopais jyuh AlexanderPico
  • Building pathway clusters from Random Forests classification using class votes
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Herbert Pang, Hongyu Zhao
    posted to clustering network pathway_analysis by jfr on 2008-04-29 15:40:12 as **** along with 4 people xtizon thomaskelder jyuh AlexanderPico
  • Bioinformatics applications for pathway analysis of microarray data.
    Curr Opin Biotechnol (18 January 2008)
    by Thomas Werner
    posted to pathway_analysis review by jfr on 2008-04-28 15:53:23 as ** along with 2 people jyuh AlexanderPico
  • KEGGanim: pathway animations for high-throughput data.
    Bioinformatics (1 December 2007)
    by Priit Adler, Jüri Reimand, Jürgen Jänes, Raivo Kolde, Hedi Peterson, Jaak Vilo
    posted to pathway_analysis software by jfr on 2008-04-09 15:05:49 as read along with 4 people jyuh dullhunk renatomilani AlexanderPico
  • Integrative microarray analysis of pathways dysregulated in metastatic prostate cancer.
    Cancer Res, Vol. 67, No. 21. (1 November 2007), pp. 10296-10303.
    by SR Setlur, TE Royce, A Sboner, JM Mosquera, F Demichelis, MD Hofer, KD Mertz, M Gerstein, MA Rubin
    posted to integration pathway_analysis meta-analysis by jfr on 2008-02-04 09:52:11 as *** along with 2 people oelemento dragonrez
  • A systems biology approach for pathway level analysis
    Genome Res. (4 September 2007), gr.6202607.
    by Sorin Draghici, Purvesh Khatri, Adi L Tarca, Kashyap Amin, Arina Done, Calin Voichita, Constantin Georgescu, Roberto Romero
    posted to database pathway_analysis software by jfr on 2007-12-07 15:02:14 as ** along with 16 people and 3 groups pengchy tmmurali dragonrez gurkanbebek grahamc shigepong zwang cabbagezs cerami xingxu shikin idonaldson Pao-Yang thomaskelder heliopais AlexanderPico Bioinformatics ParkinsonLab_at_MaRS OPIG
  • GenMAPP 2: New Features and Resources for Pathway Analysis
    BMC Bioinformatics, Vol. 8 (24 June 2007), 217.
    by Nathan Salomonis, Kristina Hanspers, Alexander C Zambon, Karen Vranizan, Steven C Lawlor, Kam D Dahlquist, Scott W Doniger, Joshua M Stuart, Bruce R Conklin, Alexander R Pico
    posted to pathway_analysis software by jfr on 2007-12-05 10:36:36 as * along with 1 person and 1 group AlexanderPico ConklinLab
  • VisANT 3.0: new modules for pathway visualization, editing, prediction and construction.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by Z Hu, DM Ng, T Yamada, C Chen, S Kawashima, J Mellor, B Linghu, M Kanehisa, JM Stuart, C DeLisi
    posted to database pathway_analysis by jfr on 2007-12-04 12:02:00 as ** along with 1 person AlexanderPico
  • PathExpress: a web-based tool to identify relevant pathways in gene expression data
    Nucl. Acids Res. (22 June 2007), gkm261.
    by Nicolas Goffard, Georg Weiller
    posted to database pathway_analysis by jfr on 2007-12-04 11:58:45 as * along with 3 people and 1 group jyuh ealloza AlexanderPico BioinfoCIPF
  • Mining pathway signatures from microarray data and relevant biological knowledge.
    J Biomed Inform, Vol. 40, No. 6. (December 2007), pp. 698-706.
    by E Panteris, S Swift, A Payne, X Liu
    posted to pathway_analysis by jfr on 2007-11-26 10:17:08 as ** along with 2 people jyuh AlexanderPico
  • Group additive regression models for genomic data analysis.
    Biostatistics (18 May 2007)
    by Yihui Luan, Hongzhe Li
    posted to pathway_analysis by jfr on 2007-11-23 15:12:28 as ** along with 1 person ptrobajo
  • Identification of key processes underlying cancer phenotypes using biologic pathway analysis.
    PLoS ONE, Vol. 2, No. 5. (2007)
    by S Efroni, CF Schaefer, KH Buetow
    posted to pathway_analysis by jfr on 2007-11-23 14:53:43 as ** along with 4 people dragonrez AlexanderPico daed thomaskelder
  • A search engine to identify pathway genes from expression data on multiple organisms
    BMC Systems Biology, Vol. 1, No. 1. (2007)
    by Chunnuan Chen, Matthew Weirauch, Corey Powell, Alexander Zambon, Joshua Stuart
    posted to pathway_analysis by jfr on 2007-09-07 13:09:18 as ** along with 6 people and 1 group tharris jyuh tmmurali rsandie waszak AlexanderPico C. elegans / WormBase
  • Extending the pathway analysis framework with a test for transcriptional variance implicates novel pathway modulation during myogenic differentiation.
    Bioinformatics (28 March 2007)
    by Daniel Kemp, N R R Nirmala, Joseph D D Szustakowski
    posted to gene_set_analysis pathway_analysis by jfr on 2007-09-07 11:44:27 as ** along with 2 people and 1 group ealloza hhlee BioinfoCIPF
  • Eu.Gene Analyzer a tool for integrating gene expression data with pathway databases.
    Bioinformatics (28 June 2007)
    by Duccio Cavalieri, Cinzia Castagnini, Simona Toti, Karolina Maciag, Thomas Kelder, Luca Gambineri, Samuele Angioli, Piero Dolara
    posted to pathway_analysis software by jfr on 2007-09-05 11:41:12 as * along with 6 people jyuh tmmurali aviad_work waszak AlexanderPico thomaskelder
  • Reactome: a knowledgebase of biological pathways and processes
    Genome Biology, Vol. 8 (16 March 2007), R39.
    by Imre Vastrik, Peter D'Eustachio, Esther Schmidt, Geeta Joshi-Tope, Gopal Gopinath, David Croft, Bernard de Bono, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein
    posted to bioinformatics pathway_analysis by jfr on 2007-07-31 16:29:35 as ** along with 6 people jyuh dragonrez balajis raiyar toshiaki_katayama AlexanderPico
  • Reverse engineering of regulatory networks in human B cells.
    Nat Genet (20 March 2005)
    by Katia Basso, Adam A A Margolin, Gustavo Stolovitzky, Ulf Klein, Riccardo Dalla-Favera, Andrea Califano
    posted to pathway_analysis by jfr on 2007-03-23 14:36:56 as read along with 8 people snuppepuppan kentsis dragonrez wnpx raiyar naegele heliopais lylu
  • Computational exploration of the activated pathways associated with DNA damage response in breast cancer.
    Proteins, Vol. 65, No. 1. (1 October 2006), pp. 103-110.
    by L Wen, W Li, M Sobel, JA Feng
    posted to breast_cancer dna_damage pathway_analysis by jfr on 2007-03-01 10:30:10 as *** along with 1 person macavity1g
  • cPath: open source software for collecting, storing, and querying biological pathways
    BMC Bioinformatics, Vol. 7 (13 November 2006), 497.
    by Ethan G Cerami, Gary D Bader, Benjamin Gross, Chris Sander
    posted to software pathway_analysis by jfr on 2007-01-12 15:31:19 as ** along with 6 people and 2 groups dquest carmaus bootsy cerami AlexanderPico srp33 dIEMoSIRIS MoSi-Rostock
  • Pathway recognition and augmentation by computational analysis of microarray expression data.
    Bioinformatics, Vol. 22, No. 2. (15 January 2006), pp. 233-241.
    by BA Novak, AN Jain
    posted to systems_biology pathway_analysis methodology by jfr on 2007-01-12 14:00:46 as ** along with 1 person AlexanderPico
  • Pathway analysis using random forests classification and regression.
    Bioinformatics (29 June 2006)
    by Herbert Pang, Aiping Lin, Matthew Holford, Bradley E E Enerson, Bin Lu, Michael P P Lawton, Eugenia Floyd, Hongyu Zhao
    posted to pathway_analysis classification by jfr on 2007-01-10 09:44:37 as *** along with 5 people and 2 groups tabu ealloza giovanni ptrobajo AlexanderPico BioinfoCIPF GeschwindLab
  • Nonparametric pathway-based regression models for analysis of genomic data.
    Biostatistics (13 June 2006)
    by Zhi Wei, Hongzhe Li
    posted to breast_cancer classification pathway_analysis by jfr on 2007-01-08 12:08:40 as **** along with 3 people macavity1g waghsk ptrobajo
  • Group testing for pathway analysis improves comparability of different microarray data sets.
    Bioinformatics (7 August 2006)
    by Theodora Manoli, Norbert Gretz, Hermann-Josef J Gröne, Marc Kenzelmann, Roland Eils, Benedikt Brors
    posted to bioinformatics pathway_analysis meta-analysis by jfr on 2006-11-08 10:39:18 as ** along with 4 people and 1 group ealloza jdiggans macavity1g ptrobajo BioinfoCIPF
  • Topology-based cancer classification and related pathway mining using microarray data.
    Nucleic Acids Res, Vol. 34, No. 14. (2006), pp. 4069-4080.
    by CC Liu, WS Chen, CC Lin, HC Liu, HY Chen, PC Yang, PC Chang, JJ Chen
    posted to bioinformatics classification pathway_analysis by jfr on 2006-11-08 10:03:24 as **
    • Вы можете ссылаться на эту страницу по адресу: http://www.citeulike.org/user/jfr/tag/pathway_analysis

    RIS BibTeX
    CiteULike organises scholarly (or academic) papers or literature and provides bibliographic (which means it makes bibliographies) for universities and higher education establishments. It helps undergraduates and postgraduates. People studying for PhDs or in postdoctoral (postdoc) positions. The service is similar in scope to EndNote or RefWorks or any other reference manager like BibTeX, but it is a social bookmarking service for scientists and humanities researchers.