www.rnaworkbench.com: A new program for analyzing RNA interference.

@article{citeulike:2273592, abstract = {RNA interference (RNAi) has become an important tool to study and utilize gene silencing by introducing short interfering RNA (siRNA). In order to predict the most efficient siRNAs, a new software tool, RNA Workbench (RNAWB), has been designed and is freely available (after registration) on http://www.rnaworkbench.com. In addition to the standard selection rules, RNAWB includes the possibility of statistical analyses of the applied selection rules (criteria). The role of RNA secondary structures in the RNA interference process as well as the application of sequence rules are discussed to show the applicability of the software.}, address = {ANF DATA (Siemens), Her\v{s}pick\'{a} 5, 639 00 Brno, Czech Republic.}, author = {Va\v{r}ekov\'{a}, Radka Svobodov\'{a} S. and Brad\'{a}\v{c}, Ivan and Plch\'{u}t, Martin and Skrdla, Michal and Wacenovsky, Michael and Mahr, Helmuth and Mayer, Georg and Tanner, Herbert and Brugger, Hermann and Withalm, Josef and Lederer, Peter and Huber, Heinrich and Gierlinger, Gerhard and Graf, Ronald and Tafer, Hakim and Hofacker, Ivo and Schuster, Peter and Pol\v{c}\'{i}k, Martin }, citeulike-article-id = {2273592}, doi = {10.1016/j.cmpb.2007.12.001}, issn = {0169-2607}, journal = {Comput Methods Programs Biomed}, keywords = {rnai}, month = {January}, posted-at = {2008-01-22 12:49:01}, priority = {2}, title = {www.rnaworkbench.com: A new program for analyzing RNA interference.}, url = {http://dx.doi.org/10.1016/j.cmpb.2007.12.001}, year = {2008} }

TY - JOUR ID - citeulike:2273592 L3 - citeulike-article-id:2273592 TI - www.rnaworkbench.com: A new program for analyzing RNA interference. JF - Comput Methods Programs Biomed AD - ANF DATA (Siemens), Heršpická 5, 639 00 Brno, Czech Republic. SN - 0169-2607 N2 - RNA interference (RNAi) has become an important tool to study and utilize gene silencing by introducing short interfering RNA (siRNA). In order to predict the most efficient siRNAs, a new software tool, RNA Workbench (RNAWB), has been designed and is freely available (after registration) on http://www.rnaworkbench.com. In addition to the standard selection rules, RNAWB includes the possibility of statistical analyses of the applied selection rules (criteria). The role of RNA secondary structures in the RNA interference process as well as the application of sequence rules are discussed to show the applicability of the software. KW - rnai AU - Vařeková, Radka Svobodová AU - Bradáč, Ivan AU - Plchút, Martin AU - Skrdla, Michal AU - Wacenovsky, Michael AU - Mahr, Helmuth AU - Mayer, Georg AU - Tanner, Herbert AU - Brugger, Hermann AU - Withalm, Josef AU - Lederer, Peter AU - Huber, Heinrich AU - Gierlinger, Gerhard AU - Graf, Ronald AU - Tafer, Hakim AU - Hofacker, Ivo AU - Schuster, Peter AU - Polčík, Martin PY - 2008/01/18/ UR - http://dx.doi.org/10.1016/j.cmpb.2007.12.001 ER -