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jyuh microarray [215 articles]

Recent papers added to jyuh library classified by the tag microarray. You can also see everyone's microarray.
  • Microarray technology and applications in the arena of genome-wide association.
    Clinical chemistry, Vol. 54, No. 7. (July 2008), pp. 1116-1124.
    by SF Grant, H Hakonarson
    posted to snp microarray gwa by jyuh on 2008-07-24 17:16:03 as **
  • SNP-specific array-based allele-specific expression analysis.
    Genome Res (27 March 2008)
    by Hans T T Bjornsson, Thomas J J Albert, Christine M M Ladd-Acosta, Roland D D Green, Michael A A Rongione, Christina M M Middle, Rafael A A Irizarry, Karl W W Broman, Andrew P P Feinberg
    posted to snp microarray by jyuh on 2008-07-18 14:02:15 as ** along with 2 people and 1 group dpollard rschulz RockmanLab
  • New Onto-Tools: Promoter-Express, nsSNPCounter and Onto-Translate.
    Nucleic Acids Res, Vol. 34, No. Web Server issue. (1 July 2006)
    by P Khatri, V Desai, AL Tarca, S Sellamuthu, DE Wildman, R Romero, S Draghici
    posted to ontology microarray by jyuh on 2008-07-18 02:49:39 as ** along with 1 person aalibes
  • Seeded Bayesian Networks: constructing genetic networks from microarray data
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Amira Djebbari, John Quackenbush
    posted to nayes microarray by jyuh on 2008-07-18 02:29:08 as ** along with 3 people phoenixzxl beete renatomilani
  • GeneCAT--novel webtools that combine BLAST and co-expression analyses.
    Nucleic acids research (14 May 2008)
    by Marek Mutwil, Jens Obro, William G T G Willats, Staffan Persson
    posted to microarray blast by jyuh on 2008-07-18 02:28:00 as ** along with 1 person mariakmejia
  • GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways.
    Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008)
    by CE Martinez-Guerrero, R Ciria, C Abreu-Goodger, G Moreno-Hagelsieb, E Merino
    posted to microarray by jyuh on 2008-07-18 02:07:52 as **
  • DAVID: Database for Annotation, Visualization, and Integrated Discovery.
    Genome Biol, Vol. 4, No. 5. (2003)
    by G Dennis, BT Sherman, DA Hosack, J Yang, W Gao, HC Lane, RA Lempicki
    posted to microarray by jyuh on 2008-07-18 02:05:31 as ** along with 1 person incovoma
  • Evaluation of automated and conventional microarray hybridization: a question of data quality and best practice?
    Biotechnology and applied biochemistry, Vol. 50, No. Pt 4. (August 2008), pp. 181-190.
    by VK Peeva, JL Lynch, CJ Desilva, NR Swanson
    posted to microarray automation by jyuh on 2008-07-17 17:33:28 as **
  • Efficient non-unique probes selection algorithms for DNA microarray.
    BMC genomics, Vol. 9 Suppl 1 (2008)
    by P Deng, MT Thai, Q Ma, W Wu
    posted to primer microarray by jyuh on 2008-07-17 15:16:35 as ** along with 1 person jfr
  • Toward improved biochips based on rolling circle amplification--influences of the microenvironment on the fluorescence properties of labeled DNA oligonucleotides.
    Annals of the New York Academy of Sciences, Vol. 1130 (July 2008), pp. 287-292.
    by E Mayer-Enthart, J Sialelli, K Rurack, U Resch-Genger, D Köster, H Seitz
    posted to rca microarray by jyuh on 2008-07-17 14:04:52 as **
  • MultiPrimer: a system for microarray PCR primer design.
    Methods in molecular biology (Clifton, N.J.), Vol. 402 (2007), pp. 305-314.
    by R Fernandes, S Skiena
    posted to primer microarray by jyuh on 2008-07-17 09:22:28 as **
  • PDTD: a web-accessible protein database for drug target identification
    BMC Bioinformatics, Vol. 9 (19 February 2008), 104.
    by Zhenting Gao, Honglin Li, Hailei Zhang, Xiaofeng Liu, Ling Kang, Xiaomin Luo, Weiliang Zhu, Kaixian Chen, Xicheng Wang, Hualiang Jiang
    posted to microarray drug database by jyuh on 2008-07-17 07:23:50 as **
  • MAID : An effect size based model for microarray data integration across laboratories and platforms
    BMC Bioinformatics, Vol. 9 (10 July 2008), 305.
    by Ivan Borozan, Limin Chen, Bryan Paeper, Jenny E Heathcote, Aled M Edwards, Michael Katze, Zhaolei Zhang, Ian D Mcgilvray
    posted to microarray by jyuh on 2008-07-17 05:13:13 as **
  • GEPAS, a web-based tool for microarray data analysis and interpretation
    Nucl. Acids Res. (28 May 2008), gkn303.
    by Joaquin Tarraga, Ignacio Medina, Jose Carbonell, Jaime Huerta-Cepas, Pablo Minguez, Eva Alloza, Fatima Al-Shahrour, Susana Vegas-Azcarate, Stefan Goetz, Pablo Escobar, Francisco Garcia-Garcia, Ana Conesa, David Montaner, Joaquin Dopazo
    posted to microarray by jyuh on 2008-07-17 05:12:02 as ** along with 1 person sgoetz
  • Fuzzy association rules for biological data analysis: a case study on yeast
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Francisco Lopez, Armando Blanco, Fernando Garcia, Carlos Cano, Antonio Marin
    posted to microarray fuzzy by jyuh on 2008-07-17 05:07:48 as ** along with 5 people and 1 group grahamc laughcry barriot xili03 yoanjacquemin Bioinformatics
  • Evolving fuzzy rules to model gene expression.
    Biosystems (30 April 2006)
    by Ricardo Linden, Amit Bhaya
    posted to microarray fuzzy by jyuh on 2008-07-17 05:06:03 as ** along with 4 people bagush eldan gespim dps
  • Effect of data normalization on fuzzy clustering of DNA microarray data.
    BMC bioinformatics, Vol. 7 (2006)
    by SY Kim, JW Lee, JS Bae
    posted to microarray fuzzy by jyuh on 2008-07-17 05:05:30 as **
  • Development of a single tube 640-plex genotyping method for detection of nucleic acid variations on microarrays.
    Nucleic acids research, Vol. 36, No. 12. (July 2008)
    by K Krjutskov, R Andreson, R Mägi, T Nikopensius, A Khrunin, E Mihailov, V Tammekivi, H Sork, M Remm, A Metspalu
    posted to snp pcr microarray by jyuh on 2008-07-16 13:53:58 as **
  • Calibrating the Performance of SNP Arrays for Whole-Genome Association Studies
    PLoS Genet, Vol. 4, No. 6. (27 June 2008), e1000109.
    by Ke Hao, Eric E Schadt, John D Storey
    posted to microarray gwa cross-platform by jyuh on 2008-07-16 13:12:55 as ** along with 3 people Stew balicea caseybrown
  • Empirical Bayes screening of many p-values with applications to microarray studies.
    Bioinformatics, Vol. 21, No. 9. (1 May 2005), pp. 1987-1994.
    by S Datta, S Datta
    posted to microarray bayes by jyuh on 2008-07-15 06:49:04 as ** along with 1 person shikin
  • Genomic outlier profile analysis: mixture models, null hypotheses, and nonparametric estimation.
    Biostatistics (Oxford, England) (6 June 2008)
    by Debashis Ghosh, Arul M M Chinnaiyan
    posted to statistics microarray by jyuh on 2008-07-14 04:51:33 as **
  • Does this band make sense? Limits to expression based cancer studies.
    Cancer letters (3 July 2008)
    by Timothy K K Williams, Charles J J Yeo, Jonathan Brody
    posted to microarray cancer bias by jyuh on 2008-07-14 04:50:01 as **
  • Technical variables in high-throughput miRNA expression profiling: Much work remains to be done.
    Biochimica et biophysica acta (7 April 2008)
    by Peter T T Nelson, Wang-Xia X Wang, Bernard R R Wilfred, Guiliang Tang
    posted to mirna microarray by jyuh on 2008-07-14 04:49:18 as **
  • Multiplexed detection methods for profiling microRNA expression in biological samples.
    Angewandte Chemie (International ed. in English), Vol. 47, No. 4. (2008), pp. 644-652.
    by AW Wark, HJ Lee, RM Corn
    posted to mirna microarray by jyuh on 2008-07-14 04:49:03 as **
  • The methodology used to measure differential gene expression affects the outcome.
    Journal of biomolecular techniques : JBT, Vol. 18, No. 5. (December 2007), pp. 321-330.
    by Y Ding, L Xu, BD Jovanovic, IB Helenowski, DL Kelly, WJ Catalona, XJ Yang, M Pins, RC Bergan
    posted to pcr microarray by jyuh on 2008-07-14 04:48:28 as ** along with 1 person jfr
  • Highly sensitive and specific microRNA expression profiling using BeadArray technology.
    Nucleic acids research (25 June 2008)
    by Jing Chen, Jean Lozach, Eliza Wickham W Garcia, Bret Barnes, Shujun Luo, Ivan Mikoulitch, Lixin Zhou, Gary Schroth, Jian-Bing B Fan
    posted to mirna microarray by jyuh on 2008-07-14 04:44:20 as ** along with 1 person bootsy
  • MicroRNA expression profiling using microarrays.
    Nature protocols, Vol. 3, No. 4. (2008), pp. 563-578.
    by CG Liu, GA Calin, S Volinia, CM Croce
    posted to mirna microarray by jyuh on 2008-07-14 04:44:09 as ** along with 1 person jfr
  • nuID: A universal naming schema of oligonucleotides for Illumina, Affymetrix, and other microarrays
    Biology Direct, Vol. 2 (31 May 2007), 16.
    by Pan Du, Warren A Kibbe, Simon M Lin
    posted to microarray by jyuh on 2008-07-14 04:21:47 as ** along with 1 person jfr
  • Model-based variance-stabilizing transformation for Illumina microarray data
    Nucl. Acids Res. (4 January 2008), gkm1075.
    by Simon M Lin, Pan Du, Wolfgang Huber, Warren A Kibbe
    posted to microarray by jyuh on 2008-07-14 04:21:28 as ** along with 2 people jfr neveaire
  • beadarray: R classes and methods for Illumina bead-based data
    Bioinformatics, Vol. 23, No. 16. (15 August 2007), pp. 2183-2184.
    by Mark J Dunning, Mike L Smith, Matthew E Ritchie, Simon Tavare
    posted to r microarray by jyuh on 2008-07-14 04:21:20 as ** along with 2 people raylim srp33
  • Dynamic repertoire of a eukaryotic transcriptome surveyed at single-nucleotide resolution
    Nature (18 May 2008)
    by Brian T Wilhelm, Samuel Marguerat, Stephen Watt, Falk Schubert, Valerie Wood, Ian Goodhead, Christopher J Penkett, Jane Rogers, Jürg Bähler
    posted to microarray by jyuh on 2008-07-14 04:19:10 as ** along with 5 people and 1 group myourshaw caseybrown GeeSharpMinor jonathanjacobs djkt Molecular Biology
  • RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays
    Genome Res. (11 June 2008), gr.079558.108.
    by John Marioni, Cristopher Mason, Shrikant Mane, Matthew Stephens, Yoav Gilad
    posted to sequencing microarray by jyuh on 2008-07-14 04:18:11 as ** along with 11 people and 1 group Ema caseybrown vmarshal lusk fpattyn ela503 semrich balicea vega giovanni stajich Berkeley Mycology
  • Assessment of gene expression in many samples using vertical arrays.
    Nucleic acids research, Vol. 36, No. 10. (June 2008)
    by RA Risques, G Rondeau, M Judex, M McClelland, J Welsh
    posted to pcr microarray hts by jyuh on 2008-07-14 04:15:10 as **
  • GenePattern 2.0
    Nature Genetics, Vol. 38, No. 5., pp. 500-501.
    by Michael Reich, Ted Liefeld, Joshua Gould, Jim Lerner, Pablo Tamayo, Jill P Mesirov
    posted to microarray by jyuh on 2008-07-14 04:01:49 as ** along with 3 people and 1 group rdiaz ealloza mayercd BioinfoCIPF
  • MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data
    BMC Bioinformatics, Vol. 9 (20 May 2008), 243.
    by Bryan Chi, Ronald J Deleeuw, Bradley P Coe, Raymond T Ng, Calum Macaulay, Wan L Lam
    posted to microarray by jyuh on 2008-07-14 03:59:13 as **
  • Comparison of Modern Techniques for Saliva Screening*
    Journal of forensic sciences (22 May 2008)
    by Jarrah R R Myers, William K K Adkins
    posted to saliva microarray by jyuh on 2008-07-14 03:53:05 as **
  • New markers for old stains: stable mRNA markers for blood and saliva identification from up to 16-year-old stains.
    International journal of legal medicine (2 July 2008)
    by Dmitry Zubakov, Mieke Kokshoorn, Ate Kloosterman, Manfred Kayser
    posted to saliva microarray ffpe blood by jyuh on 2008-07-14 03:42:57 as **
  • Salivary diagnostics: enhancing disease detection and making medicine better.
    European journal of dental education : official journal of the Association for Dental Education in Europe, Vol. 12 Suppl 1 (February 2008), pp. 22-29.
    by A Segal, DT Wong
    posted to saliva microarray by jyuh on 2008-07-14 03:40:44 as **
  • Characterization of salivary RNA by cDNA library analysis
    Archives of Oral Biology, Vol. In Press, Corrected Proof
    by Noh J Park, Xiaofeng Zhou, Tianwei Yu, Brigitta M Brinkman, Bernhard G Zimmermann, Visswanathan Palanisamy, David T Wong
    posted to saliva microarray by jyuh on 2008-07-14 03:37:39 as ** along with 2 people and 2 groups dchughes tofutofu83 G4ID Genetics-of-Gambling
  • SIMAGE: simulation of DNA-microarray gene expression data.
    BMC bioinformatics, Vol. 7 (2006)
    by CJ Albers, RC Jansen, J Kok, OP Kuipers, SA van Hijum
    posted to simulation microarray by jyuh on 2008-07-14 03:16:24 as **
  • Analysis of the real EADGENE data set: Comparison of methods and guidelines for data normalisation and selection of differentially expressed genes (Open Access publication).
    Genet Sel Evol, Vol. 39, No. 6. (c 2007), pp. 633-650.
    by F Jaffrézic, DJ de Koning, PJ Boettcher, A Bonnet, B Buitenhuis, R Closset, S Déjean, C Delmas, JC Detilleux, P Dovc, M Duval, JL Foulley, J Hedegaard, H Hornshøj, I Hulsegge, L Janss, K Jensen, L Jiang, M Lavric, KA Lê Cao, MS Lund, R Malinverni, G Marot, H Nie, W Petzl, MH Pool, C Robert-Granié, M San Cristobal, EM van Schothorst, HJ Schuberth, P Sørensen, A Stella, G Tosser-Klopp, D Waddington, M Watson, W Yang, H Zerbe, HM Seyfert
    posted to microarray by jyuh on 2008-07-14 03:14:17 as ** along with 1 person GeeSharpMinor
  • Analysis of a simulated microarray dataset: Comparison of methods for data normalisation and detection of differential expression (Open Access publication).
    Genet Sel Evol, Vol. 39, No. 6. (c 2007), pp. 669-683.
    by M Watson, M Pérez-Alegre, MD Baron, C Delmas, P Dovc, M Duval, JL Foulley, JJ Garrido-Pavón, I Hulsegge, F Jaffrézic, A Jiménez-Marín, M Lavric, KA Lê Cao, G Marot, D Mouzaki, MH Pool, C Robert-Granié, M San Cristobal, G Tosser-Klopp, D Waddington, DJ de Koning
    posted to microarray by jyuh on 2008-07-14 03:13:32 as ** along with 1 person GeeSharpMinor
  • Analysis of the real EADGENE data set: Multivariate approaches and post analysis (Open Access publication).
    Genet Sel Evol, Vol. 39, No. 6. (c 2007), pp. 651-668.
    by P Sørensen, A Bonnet, B Buitenhuis, R Closset, S Déjean, C Delmas, M Duval, L Glass, J Hedegaard, H Hornshøj, I Hulsegge, F Jaffrézic, K Jensen, L Jiang, DJ de Koning, KA Lê Cao, H Nie, W Petzl, MH Pool, C Robert-Granié, M San Cristobal, MS Lund, EM van Schothorst, HJ Schuberth, HM Seyfert, G Tosser-Klopp, D Waddington, M Watson, W Yang, H Zerbe
    posted to microarray by jyuh on 2008-07-14 03:13:15 as ** along with 1 person GeeSharpMinor
  • Making a new technology work: the standardization and regulation of microarrays.
    The Yale journal of biology and medicine, Vol. 80, No. 4. (December 2007), pp. 165-178.
    by S Rogers, A Cambrosio
    posted to microarray by jyuh on 2008-07-14 03:09:20 as **
  • A disattenuated correlation estimate when variables are measured with error: illustration estimating cross-platform correlations.
    Statistics in medicine, Vol. 27, No. 7. (30 March 2008), pp. 1026-1039.
    by KJ Archer, CI Dumur, GS Taylor, MD Chaplin, A Guiseppi-Elie, GA Buck, G Grant, A Ferreira-Gonzalez, CT Garrett
    posted to microarray cross-platform by jyuh on 2008-07-11 04:44:15 as ** along with 1 person jfr
  • Nonparametric relevance-shifted multiple testing procedures for the analysis of high-dimensional multivariate data with small sample sizes
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Cornelia Froemke, Ludwig Hothorn, Siegfried Kropf
    posted to multiplicity microarray by jyuh on 2008-07-11 04:43:25 as ** along with 2 people shigepong mijam
  • Required sample size and nonreplicability thresholds for heterogeneous genetic associations.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 2. (15 January 2008), pp. 617-622.
    by R Moonesinghe, MJ Khoury, T Liu, JP Ioannidis
    posted to power microarray by jyuh on 2008-07-11 04:42:46 as **
  • Innovative integrated system for real-time measurement of hybridization and melting on standard format microarrays.
    BioTechniques, Vol. 44, No. 7. (June 2008), pp. 913-920.
    by Y Marcy, PY Cousin, M Rattier, G Cerovic, G Escalier, G Béna, M Guéron, L McDonagh, F le Boulaire, H Bénisty, C Weisbuch, JC Avarre
    posted to microarray by jyuh on 2008-07-11 04:37:09 as **
  • Messenger RNA expression profiling using DNA microarray technology: diagnostic tool, scientific analysis or un-interpretable data?
    International journal of molecular medicine, Vol. 21, No. 1. (January 2008), pp. 13-17.
    by MS Walker, TA Hughes
    posted to microarray by jyuh on 2008-07-11 04:32:33 as **
  • Evaluating Statistical Methods Using Plasmode Data Sets in the Age of Massive Public Databases: An Illustration Using False Discovery Rates
    PLoS Genet, Vol. 4, No. 6. (20 June 2008), e1000098.
    by Gary L Gadbury, Qinfang Xiang, Lin Yang, Stephen Barnes, Grier P Page, David B Allison
    posted to statistics microarray by jyuh on 2008-07-11 04:31:58 as ** along with 1 person djkt
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