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kinestetika metagenomics [18 articles]

Recent papers added to kinestetika library classified by the tag metagenomics. You can also see everyone's metagenomics.
  • Reverse Methanogenesis: Testing the Hypothesis with Environmental Genomics
    Science, Vol. 305, No. 5689. (3 September 2004), pp. 1457-1462.
    by Steven J Hallam, Nik Putnam, Christina M Preston, John C Detter, Daniel Rokhsar, Paul M Richardson, Edward F Delong
    posted to metagenomics anme by kinestetika on 2008-08-14 11:43:28 as ** along with 4 people and 2 groups jmeppley bluto calamar cursonivel1 microbiology_nijmegen cursonivel1
  • A genomic view of methane oxidation by aerobic bacteria and anaerobic archaea.
    Genome biology, Vol. 6, No. 2. (2005)
    by L Chistoserdova, JA Vorholt, ME Lidstrom
    posted to methylotroph metagenomics genome anme by kinestetika on 2008-08-14 11:42:56 as ** along with 1 group microbiology_nijmegen
  • A bacterial metapopulation adapts locally to phage predation despite global dispersal
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 293-297.
    by Victor Kunin, Shaomei He, Falk Warnecke, Brook S Peterson, Garcia, Matthew Haynes, Natalia Ivanova, Linda L Blackall, Mya Breitbart, Forest Rohwer, Katherine D Mcmahon, Philip Hugenholtz
    posted to wastewater virus metagenomics ecology by kinestetika on 2008-08-04 13:33:19 as ** along with 2 people and 1 group jmeppley Thaverkamp microbiology_nijmegen
  • Single-Molecule DNA Sequencing of a Viral Genome
    Science, Vol. 320, No. 5872. (4 April 2008), pp. 106-109.
    by Timothy D Harris, Phillip R Buzby, Hazen Babcock, Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James Dimeo, William J Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie
    posted to metagenomics methods by kinestetika on 2008-04-04 19:11:08 as ** along with 14 people and 3 groups jyuh vmarshal ilyaf austin operon dchughes samjlord neils zwang cabbagezs benlin caseybrown kjglennie melting moernerlab Microbial-Ecology microbiology_nijmegen
  • Functional metagenomic profiling of nine biomes
    Nature (12 March 2008)
    by Elizabeth A Dinsdale, Robert A Edwards, Dana Hall, Florent Angly, Mya Breitbart, Jennifer M Brulc, Mike Furlan, Christelle Desnues, Matthew Haynes, Linlin Li, Lauren Mcdaniel, Mary A Moran, Karen E Nelson, Christina Nilsson, Robert Olson, John Paul, Beltran R Brito, Yijun Ruan, Brandon K Swan, Rick Stevens, David L Valentine, Rebecca V Thurber, Linda Wegley, Bryan A White, Forest Rohwer
    posted to evolution metagenomics virus by kinestetika on 2008-04-04 18:56:19 as ** along with 10 people and 5 groups jlgreen oelemento vaulot vrich jmeppley alexisfjdufresne bluto jyuh djkt neils Green Lab iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology microbiology_nijmegen
  • Genomics, environmental genomics and the issue of microbial species
    Heredity, Vol. aop, No. current.
    by DM Ward, FM Cohan, D Bhaya, JF Heidelberg, M Kühl, A Grossman
    posted to ecological_theory metagenomics species_concept by kinestetika on 2008-03-03 11:03:28 as ** along with 1 person and 2 groups Thaverkamp Microbial-Ecology microbiology_nijmegen
  • Metagenomics: Read length matters
    Appl. Environ. Microbiol. (11 January 2008), AEM.02181-07.
    by Eric K Wommack, Jaysheel Bhavsar, Jacques Ravel
    posted to metagenomics methods by kinestetika on 2008-02-25 21:53:08 as ** along with 8 people and 2 groups alexl bluto alexisfjdufresne jmeppley azazello Thaverkamp skato_toyaku rvgomes Microbial-Ecology microbiology_nijmegen
  • Insights into the genome of large sulfur bacteria revealed by analysis of single filaments.
    PLoS Biol, Vol. 5, No. 9. (September 2007)
    by M Mussmann, FZ Hu, M Richter, D de Beer, A Preisler, BB Jørgensen, M Huntemann, FO Glöckner, R Amann, WJ Koopman, RS Lasken, B Janto, J Hogg, P Stoodley, R Boissy, GD Ehrlich
    posted to genome metagenomics methods by kinestetika on 2008-02-18 11:44:02 as **
  • The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific
    PLoS Biology, Vol. 5, No. 3. (1 March 2007), e77.
    by Douglas B Rusch, Aaron L Halpern, Granger Sutton, Karla B Heidelberg, Shannon Williamson, Shibu Yooseph, Dongying Wu, Jonathan A Eisen, Jeff M Hoffman, Karin Remington, Karen Beeson, Bao Tran, Hamilton Smith, Holly Baden-Tillson, Clare Stewart, Joyce Thorpe, Jason Freeman, Cynthia Andrews-Pfannkoch, Joseph E Venter, Kelvin Li, Saul Kravitz, John F Heidelberg, Terry Utterback, Yu-Hui Rogers, Luisa I Falcón, Valeria Souza, Germán Bonilla-Rosso, Luis E Eguiarte, David M Karl, Shubha Sathyendranath, Trevor Platt, Eldredge Bermingham, Victor Gallardo, Giselle Tamayo-Castillo, Michael R Ferrari, Robert L Strausberg, Kenneth Nealson, Robert Friedman, Marvin Frazier, Craig J Venter
    posted to biodiversity marine metagenomics by kinestetika on 2008-02-18 09:00:19 as ** along with 9 people and 5 groups djkt jmeppley kaspermunch michC jdelcampo stajich skoch3 beatrizfernandez Thaverkamp iSEEM Bioinformatics Microbial-Ecology Koch_Lab microbiology_nijmegen
  • Self-Assembled Water-Soluble Nucleic Acid Probe Tiles for Label-Free RNA Hybridization Assays
    Science, Vol. 319, No. 5860. (11 January 2008), pp. 180-183.
    by Yonggang Ke, Stuart Lindsay, Yung Chang, Yan Liu, Hao Yan
    posted to metagenomics methods by kinestetika on 2008-01-14 19:30:30 as ** along with 4 people and 1 group stsaft lisa1 dna rschulz microbiology_nijmegen
  • Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea
    Nature, Vol. 439, No. 7078. (16 February 2006), pp. 847-850.
    by Niels-Ulrik Frigaard, Asuncion Martinez, Tracy J Mincer, Edward F Delong
    posted to evolution metagenomics by kinestetika on 2007-10-08 19:58:45 as ** along with 2 people and 1 group dayjm jmeppley microbiology_nijmegen
  • Microbial diversity in the deep sea and the underexplored "rare biosphere"
    Proc Natl Acad Sci U S A (31 July 2006)
    by Mitchell L L Sogin, Hilary G G Morrison, Julie A A Huber, David Mark M Welch, Susan M M Huse, Phillip R R Neal, Jesus M M Arrieta, Gerhard J J Herndl
    posted to biodiversity eco_micro evolution marine metagenomics by kinestetika on 2007-10-08 08:09:26 as *** along with 8 people and 1 group mcox Olaf_Ilzins jmeppley balicea madhadron rabu bluto xingxu microbiology_nijmegen
  • Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth.
    Proc Natl Acad Sci U S A, Vol. 104, No. 29. (17 July 2007), pp. 11889-11894.
    by Y Marcy, C Ouverney, EM Bik, T Lösekann, N Ivanova, HG Martin, E Szeto, D Platt, P Hugenholtz, DA Relman, SR Quake
    posted to metagenomics novel_clades by kinestetika on 2007-10-07 13:11:06 as *** along with 1 group microbiology_nijmegen
  • Analysis of the first genome fragment from the marine sponge-associated, novel candidate phylum Poribacteria by environmental genomics
    Environmental Microbiology, Vol. 8, No. 4. (April 2006), pp. 612-624.
    by Lars Fieseler, Achim Quaiser, Christa Schleper, Ute Hentschel
    posted to metagenomics poribacteria by kinestetika on 2007-10-06 20:02:36 as *** along with 1 group microbiology_nijmegen
  • Microbial Population Structures in the Deep Marine Biosphere
    Science, Vol. 318, No. 5847. (5 October 2007), pp. 97-100.
    by Julie A Huber, David B Welch, Hilary G Morrison, Susan M Huse, Phillip R Neal, David A Butterfield, Mitchell L Sogin
    posted to biodiversity evolution metagenomics by kinestetika on 2007-10-05 08:57:59 as read along with 7 people and 3 groups hpaces Fabnot madhadron djkt mblwhoi stajich mellabee iSEEM Papers recommended by the Roscoff Plankton Group microbiology_nijmegen
  • Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
    Environmental Microbiology, Vol. 7, No. 12. (December 2005), pp. 1985-1995.
    by Alexander H Treusch, Sven Leininger, Arnulf Kletzin, Stephan C Schuster, Hans-Peter Klenk, Christa Schleper
    posted to biochemistry crenarchaeal_nitrification metagenomics by kinestetika on 2007-08-15 10:45:18 as ** along with 2 groups anammox microbiology_nijmegen
  • Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota.
    PLoS Biol, Vol. 4, No. 4. (April 2006)
    by SJ Hallam, TJ Mincer, C Schleper, CM Preston, K Roberts, PM Richardson, EF DeLong
    posted to biochemistry crenarchaeal_nitrification metagenomics by kinestetika on 2007-08-15 10:44:46 as ** along with 2 groups anammox microbiology_nijmegen
  • Deciphering the evolution and metabolism of an anammox bacterium from a community genome
    Nature, Vol. 440, No. 7085., pp. 790-794.
    by Marc Strous, Eric Pelletier, Sophie Mangenot, Thomas Rattei, Angelika Lehner, Michael W Taylor, Matthias Horn, Holger Daims, Delphine Bartol-Mavel, Patrick Wincker, Valã©rie Barbe, Nuria Fonknechten, David Vallenet, Bã©atrice Segurens, Chantal Schenowitz-Truong, Claudine Mã©digue, Astrid Collingro, Berend Snel, Bas E Dutilh, Huub, Chris van der Drift, Irina Cirpus, Katinka T van de Pas-Schoonen, Harry R Harhangi, Laura van Niftrik, Markus Schmid, Jan Keltjens, Jack van de Vossenberg, Boran Kartal, Harald Meier, Dmitrij Frishman, Martijn A Huynen, Hans-Werner Mewes, Jean Weissenbach, Mike SM Jetten, Michael Wagner, Denis Le Paslier
    posted to anammox biochemistry kuenenia lipids metagenomics by kinestetika on 2007-08-13 09:31:59 as ** along with 2 people and 4 groups jlgreen vrich iSEEM Green Lab anammox microbiology_nijmegen
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