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kluck library [56 articles]

Статьи, недавно добавленные в библиотеку kluck library ordered by importance.
  • Genome-wide inference of protein interaction sites: lessons from the yeast high-quality negative protein-protein interaction dataset.
    Nucleic Acids Res (14 February 2008)
    by Jie Guo, Xiaomei Wu, Da-Yong Y Zhang, Kui Lin
    posted to htp linear motifs network ppi protein scoring by kluck on 2008-02-22 10:59:52 as **** along with 4 people paolomarcatili tmmurali neils stef_lise
  • A hierarchical statistical model to assess the confidence of peptides and proteins inferred from tandem mass spectrometry
    Bioinformatics, Vol. 24, No. 2. (15 January 2008), pp. 202-208.
    by Changyu Shen, Zhiping Wang, Ganesh Shankar, Xiang Zhang, Lang Li
    posted to complex htp protein scoring by kluck on 2008-01-24 12:50:21 as **** along with 1 person jyuh
  • Basic mechanisms of high-risk human papillomavirus-induced carcinogenesis: Roles of E6 and E7 proteins
    Cancer Science, Vol. 98, No. 10. (October 2007), pp. 1505-1511.
    by Narisawa-Saito, Mako, Kiyono, Tohru
    posted to e6 e7 papillomavirus pv review by kluck on 2008-01-24 08:05:49 as ****
  • Cellular binding partners of the human papillomavirus E6 protein.
    Arch Virol (3 January 2008)
    by Sandy S Tungteakkhun, Penelope J Duerksen-Hughes
    posted to e6 papillomavirus pv review by kluck on 2008-01-24 08:04:02 as ****
  • Are protein complexes made of cores, modules and attachments?
    Proteomics (4 January 2008)
    by Chi Nam Ignatius N Pang, James Robert R Krycer, Angela Lek, Marc Ronald R Wilkins
    posted to attachment complex core modul protein by kluck on 2008-01-22 15:14:18 as **** along with 1 person paolomarcatili
  • An integrative approach for predicting interactions of protein regions
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i35-41.
    by Sven-Eric Schelhorn, Thomas Lengauer, Mario Albrecht
    posted to prediction ppi motifs linear domain by kluck on 2008-08-11 10:32:17 as *** along with 2 people zwang neils
  • Probing the Extent of Randomness in Protein Interaction Networks
    PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000114.
    by Joseph Ivanic, Anders Wallqvist, Jaques Reifman
    posted to randomness ppi network by kluck on 2008-07-28 08:16:45 as *** along with 1 person Ema
  • Biological function in a non-native partially folded state of a protein
    The EMBO Journal, Vol. aop, No. current. (01 May 2008)
    by Francesco Bemporad, Joerg Gsponer, Harri I Hopearuoho, Georgia Plakoutsi, Gianmarco Stati, Massimo Stefani, Niccolo Taddei, Michele Vendruscolo, Fabrizio Chiti
    posted to protein iup function disorder by kluck on 2008-06-18 11:27:27 as ***
  • Whole genome protein domain analysis using a new method for domain clustering
    Computers & Chemistry, Vol. 23, No. 3-4. (15 June 1999), pp. 333-340.
    by Jérome Gouzy, Florence Corpet, Daniel Kahn
    posted to mkdom evolution domain by kluck on 2008-05-22 07:55:09 as ***
  • Comparative analysis of five protein-protein interaction corpora
    BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008)
    by Sampo Pyysalo, Antti Airola, Juho Heimonen, Jari Bjorne, Filip Ginter, Tapio Salakoski
    posted to text-mining scoring prediction ppi htp by kluck on 2008-05-13 10:50:04 as *** along with 5 people and 2 groups gilesc aprildh31 anthropomorphism laughcry vlachmore Proteasome BioInfPDL
  • Structural disorder serves as a weak signal for intracellular protein degradation.
    Proteins (14 November 2007)
    by P Tompa, J Prilusky, I Silman, J L L Sussman
    posted to protein ppi motifs kenbox iup htp disorder degradation dbox by kluck on 2008-05-05 15:09:47 as *** along with 4 people allmensch higueruelo camster chad_davis
  • Large-scale screening for novel low-affinity extracellular protein interactions
    Genome Res. (22 February 2008), gr.7187808.
    by Mark K Bushell, Christian Sollner, Benjamin Schuster-Boeckler, Alex Bateman, Gavin J Wright
    posted to proteomics protein ppi htp extracellular by kluck on 2008-04-29 09:34:52 as *** along with 9 people carlk paolomarcatili niallhaslam jyuh tmmurali neils Dualsystems grahamc zwang
  • The MoVIN server for the analysis of protein interaction networks.
    BMC bioinformatics, Vol. 9 Suppl 2 (2008)
    by P Marcatili, G Bussotti, A Tramontano
    posted to htp motifs network ppi prediction protein proteomics by kluck on 2008-04-21 07:34:49 as *** along with 3 people jyuh carlk maralena
  • Intrinsic disorder in the Protein Data Bank.
    Journal of biomolecular structure & dynamics, Vol. 24, No. 4. (February 2007), pp. 325-342.
    by T Le Gall, PR Romero, MS Cortese, VN Uversky, AK Dunker
    posted to disorder iup pdb protein by kluck on 2008-04-17 08:55:45 as ***
  • Characterization and prediction of protein interfaces to infer protein-protein interaction networks.
    Current pharmaceutical biotechnology, Vol. 9, No. 2. (April 2008), pp. 67-76.
    by O Keskin, N Tuncbag, A Gursoy
    posted to network ppi prediction protein by kluck on 2008-04-10 16:46:11 as ***
  • Evidence of probabilistic behaviour in protein interaction networks.
    BMC Syst Biol, Vol. 2, No. 1. (31 January 2008)
    by Joseph Ivanic, Anders Wallqvist, Jaques Reifman
    posted to network ppi probability protein by kluck on 2008-02-22 11:11:23 as *** along with 1 person wilbur
  • Integration of genomic data for inferring protein complexes from global protein-protein interaction networks.
    IEEE Trans Syst Man Cybern B Cybern, Vol. 38, No. 1. (February 2008), pp. 5-16.
    by H Zheng, H Wang, DH Glass
    posted to complex htp network ppi protein by kluck on 2008-02-22 11:01:48 as ***
  • Identification of protein interaction partners and protein-protein interaction sites
    Journal of Molecular Biology, Vol. In Press, Accepted Manuscript
    by Sophie Sacquin-Mora, Alessandra Carbone, Richard Lavery
    posted to prediction ppi docking by kluck on 2008-08-20 10:46:04 as ** along with 1 person jteyra
  • Impacts of protein-protein interaction domains on organism and network complexityPPI domains and organism/network complexity.
    Genome research (7 August 2008)
    by Kai Xia, Zheng Fu, Lei Hou, Jing-Dong J D Han
    posted to protein ppi network htp domain by kluck on 2008-08-11 10:30:57 as ** along with 1 person bpcusack
  • Pseudosubstrate Inhibition of APCCdh1 by Acm1: Regulation by Proteolysis and Cdc28 Phosphorylation.
    Molecular and cellular biology (2 June 2008)
    by Denis Ostapenko, Janet L L Burton, Ruiwen Wang, Mark J J Solomon
    posted to ubiquitin kenbox dbox cycle cell apc by kluck on 2008-06-11 08:53:15 as **
  • Mechanism of ubiquitin-chain formation by the human anaphase-promoting complex.
    Cell, Vol. 133, No. 4. (16 May 2008), pp. 653-665.
    by L Jin, A Williamson, S Banerjee, I Philipp, M Rape
    posted to ubiquitin apcc by kluck on 2008-06-04 14:04:02 as **
  • Quantification of the elevated rate of domain rearrangements in metazoa.
    J Mol Biol, Vol. 372, No. 5. (5 October 2007), pp. 1337-1348.
    by D Ekman, AK Björklund, A Elofsson
    posted to evolution domain arrangement by kluck on 2008-05-22 08:45:26 as ** along with 1 person cjeans
  • Domain deletions and substitutions in the modular protein evolution.
    FEBS J, Vol. 273, No. 9. (May 2006), pp. 2037-2047.
    by J Weiner, F Beaussart, E Bornberg-Bauer
    posted to evolution domain by kluck on 2008-05-22 08:36:45 as ** along with 1 person choonpeng
  • Automated Improvement of Domain ANnotations using context analysis of domain arrangements (AIDAN)
    Bioinformatics, Vol. 23, No. 14. (15 July 2007), pp. 1834-1836.
    by Francois Beaussart, January Weiner, Erich Bornberg-Bauer
    posted to domain arrangement annotation aidan by kluck on 2008-05-22 08:30:18 as ** along with 2 people gulkur january
  • Predicting protein function from sequence and structure
    Nat Rev Mol Cell Biol, Vol. 8, No. 12. (December 2007), pp. 995-1005.
    by David Lee, Oliver Redfern, Christine Orengo
    posted to structure sequence prediction function by kluck on 2008-05-22 08:14:45 as ** along with 9 people janasont skhadar neils cjeans zwang Evangelia hpaces Ema renatomilani
  • CATHEDRAL: A Fast and Effective Algorithm to Predict Folds and Domain Boundaries from Multidomain Protein Structures
    PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e232.
    by Oliver C Redfern, Andrew Harrison, Tim Dallman, Frances M Pearl, Christine A Orengo
    posted to structure prediction domain cathedral by kluck on 2008-05-22 08:05:53 as ** along with 2 people dgront Ema
  • Assessment of the probabilities for evolutionary structural changes in protein folds.
    Bioinformatics (Oxford, England), Vol. 23, No. 7. (1 April 2007), pp. 832-841.
    by J Viksna, D Gilbert
    posted to protein modul mejc evolution by kluck on 2008-05-13 10:43:01 as **
  • From pull-down data to protein interaction networks and com-plexes with biological relevance.
    Bioinformatics (26 February 2008)
    by Bing Zhang, Byung-Hoon H Park, Tatiana Karpinets, Nagiza F F Samatova
    posted to spectrometry protein prediction ppi network mass htp core complex by kluck on 2008-04-25 08:25:13 as ** along with 4 people carlk jyuh chad_davis grahamc
  • Chaperones as integrators of cellular networks: changes of cellular integrity in stress and diseases.
    IUBMB life, Vol. 60, No. 1. (January 2008), pp. 10-18.
    by R Palotai, MS Szalay, P Csermely
    posted to complex network ppi protein proteomics response stress by kluck on 2008-04-03 12:20:01 as **
  • Walking the Interactome for Prioritization of Candidate Disease Genes
    The American Journal of Human Genetics, Vol. In Press, Corrected Proof
    by Sebastian Kohler, Sebastian Bauer, Denise Horn, Peter N Robinson
    posted to disease genes htp network ppi protein proteomics by kluck on 2008-03-31 07:11:54 as ** along with 3 people raiyar daed jyuh
  • Gene3D: comprehensive structural and functional annotation of genomes.
    Nucleic Acids Res, Vol. 36, No. Database issue. (January 2008)
    by C Yeats, J Lees, A Reid, P Kellam, N Martin, X Liu, C Orengo
    posted to annotation go network ppi protein by kluck on 2008-03-18 14:29:45 as ** along with 2 people jyuh grottenolm
  • PRINCESS: a PRotein INteraction Confidence Evaluation System with multiple data Sources.
    Mol Cell Proteomics (29 January 2008)
    by Dong Li, Wanlin Liu, Zhongyang Liu, Jian Wang, Qijun Liu, Yunping Zhu, Fuchu He
    posted to htp network ppi protein scoring by kluck on 2008-02-22 11:14:24 as ** along with 1 person jyuh
  • Assessing the Exceptionality of Network Motifs.
    J Comput Biol (7 February 2008)
    by F Picard, J-J J Daudin, M Koskas, S Schbath, S Robin
    posted to htp linear motifs network ppi protein by kluck on 2008-02-22 11:06:32 as ** along with 2 people tmmurali maralena
  • The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries
    BMC Bioinformatics, Vol. 7, No. 1. (2006)
    by Richard Cote, Philip Jones, Rolf Apweiler, Henning Hermjakob
    posted to go ontology webservice by kluck on 2008-02-13 13:31:56 as ** along with 1 person dullhunk
  • Visualizing spatially correlated dynamics that directs RNA conformational transitions
    Nature, Vol. 450, No. 7173., pp. 1263-1267.
    by Qi Zhang, Andrew C Stelzer, Charles K Fisher, Hashim M Al-Hashimi
    posted to rna by kluck on 2008-01-22 08:34:19 as * along with 7 people and 3 groups simone nigham cactus sobolevnrm niallhaslam joseph_x_zhou kintoki baker-group HIV_DR Soft Matter
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