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kmdaily genomics [13 articles]

Recent papers added to kmdaily library classified by the tag genomics. You can also see everyone's genomics.
  • Whole-genome re-sequencing
    Current Opinion in Genetics & Development, Vol. 16, No. 6. (December 2006), pp. 545-552.
    by David R Bentley
    posted to research genomics genome biology bioinformatics by kmdaily on 2008-05-30 02:19:34 as ** along with 4 people and 3 groups jo_davies indigoviolet dchughes azazello EisenLab G4ID Genetics-of-Gambling
  • Advanced sequencing technologies and their wider impact in microbiology
    J Exp Biol, Vol. 210, No. 9. (1 May 2007), pp. 1518-1525.
    by Neil Hall
    posted to research genomics genome biology bioinformatics by kmdaily on 2008-05-30 02:19:04 as ** along with 2 people xingxu rschulz
  • Next-generation sequencing transforms today's biology
    Nature Methods, Vol. 5, No. 1. (19 December 2007), pp. 16-18.
    by Stephan C Schuster
    posted to research genomics genome bioinformatics by kmdaily on 2008-05-30 02:18:31 as ** along with 4 people jyuh yas balicea xingxu
  • Using quality scores and longer reads improves accuracy of Solexa read mapping
    BMC Bioinformatics, Vol. 9 (28 February 2008), 128.
    by Andrew D Smith, Zhenyu Xuan, Michael Q Zhang
    posted to research genomics genome bioinformatics algorithms by kmdaily on 2008-05-30 02:15:32 as ** along with 5 people heliopais farhat caseybrown ghattem mdimon
  • ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements
    Genome Res. (19 October 2006), gr.4537706.
    by James Taylor, Svitlana Tyekucheva, David C King, Ross C Hardison, Webb Miller, Francesca Chiaromonte
    posted to algorithms bioinformatics biology chromosome computational datamining genome genomics machinelearning motif regulatory search transcription by kmdaily on 2007-12-07 17:51:10 as ***
  • The UCSC Known Genes
    Bioinformatics, Vol. 22, No. 9. (1 May 2006), pp. 1036-1046.
    by Fan Hsu, James W Kent, Hiram Clawson, Robert M Kuhn, Mark Diekhans, David Haussler
    posted to bioinformatics biology computational genome genomics research transcription by kmdaily on 2007-12-06 18:26:04 as **** along with 3 people wenhan antonkratz rschulz
  • Computational Detection and Location of Transcription Start Sites in Mammalian Genomic DNA
    Genome Res., Vol. 12, No. 3. (1 March 2002), pp. 458-461.
    by Thomas A Down, Tim J Hubbard
    posted to bioinformatics biology computational genome genomics motif regulatory research search transcription by kmdaily on 2007-12-04 07:02:47 as **** along with 2 people smiddha olympos
  • Distinct class of putative "non-conserved" promoters in humans: Comparative studies of alternative promoters of human and mouse genes
    Genome Res., Vol. 17, No. 7. (1 July 2007), pp. 1005-1014.
    by Katsuki Tsuritani, Takuma Irie, Riu Yamashita, Yuta Sakakibara, Hiroyuki Wakaguri, Akinori Kanai, Junko Mizushima-Sugano, Sumio Sugano, Kenta Nakai, Yutaka Suzuki
    posted to bioinformatics genome genomics motif regulatory by kmdaily on 2007-12-04 07:01:46 as **** along with 6 people and 2 groups nickluscombe djkt cabbagezs toshiaki_katayama antonkratz cisevol EBI-regulation cis-regulatory-evolution
  • What is a gene, post-ENCODE? History and updated definition.
    Genome Res, Vol. 17, No. 6. (June 2007), pp. 669-681.
    by MB Gerstein, C Bruce, JS Rozowsky, D Zheng, J Du, JO Korbel, O Emanuelsson, ZD Zhang, S Weissman, M Snyder
    posted to biology genome genomics research by kmdaily on 2007-10-04 22:59:51 as **** along with 26 people and 4 groups mjoach altotor tharris hpaces jyuh carolh12 eweaver dpollard balicea dchughes dullhunk madhadron cottrell grahamc egonw ghattem sujaikumar Garamonfok PunkRock jasonbobe PredictER cabbagezs Jporci krokicki antonkratz Minty Bioinformatics EisenLab G4ID Genetics-of-Gambling
  • EXMOTIF: Efficient Structured Motif Extraction
    Algorithms for Molecular Biology, Vol. 1 (16 November 2006), 21.
    by Yongqiang Zhang, Mohammed J Zaki
    posted to algorithms chromosome computational genome genomics motif regulatory search by kmdaily on 2007-10-04 22:57:23 as **
  • Are There Rearrangement Hotspots in the Human Genome?
    PLoS Computational Biology, Vol. preprint, No. 2007. (1 September 2007), e209.eor.
    by Max Alekseyev, Pavel A Pevzner
    posted to analysis bioinformatics chromosome evolution genome genomics rearrangement by kmdaily on 2007-09-15 17:30:47 as ***
  • Automated Querying of Genome Databases
    PLoS Computational Biology, Vol. 3, No. 1. (1 January 2007), e1.
    by Peter Schattner
    posted to analysis bioinformatics genome genomics by kmdaily on 2007-08-13 23:05:09 as *** along with 3 people skhadar mikaelhuss olympos
  • Identification of an OCT4 and SRY regulatory module using integrated computational and experimental genomics approaches.
    Genome Res, Vol. 17, No. 6. (June 2007), pp. 807-817.
    by VX Jin, H O'geen, S Iyengar, R Green, PJ Farnham
    posted to bioinformatics computational genome genomics regulatory research by kmdaily on 2007-08-13 22:59:52 as ** along with 3 people and 1 group kengg cjeans ghattem Plantandetc
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