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lp2 library [234 articles]

Статьи, недавно добавленные в библиотеку lp2 library ordered by importance.
  • Bayesian association of haplotypes and non-genetic factors to regulatory and phenotypic variation in human populations
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i212-221.
    by Jim C Huang, Anitha Kannan, John Winn
    posted to genetics ml by lp2 on 2007-09-11 14:54:43 as ***
  • Joint discovery of haplotype blocks and complex trait associations from SNP sequences
    (2004), pp. 286-292.
    by Nebojsa Jojic, Vladimir Jojic, David Heckerman
    posted to association ml by lp2 on 2007-09-11 14:53:46 as ***
  • Natural history and evolutionary principles of gene duplication in fungi
    Nature, Vol. 449, No. 7158., pp. 54-61.
    by Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Regev
    posted to no-tag by lp2 on 2007-09-07 12:39:28 as *** along with 11 people and 4 groups pkm aheilbut dpollard tny dchughes djkt stajich zwang biomcgary tzhughes maximilianh EisenLab G4ID Genetics-of-Gambling Berkeley Mycology
  • Contribution of Horizontal Gene Transfer to the Evolution of Saccharomyces cerevisiae
    Eukaryotic Cell, Vol. 4, No. 6. (1 June 2005), pp. 1102-1115.
    by Charles Hall, Sophie Brachat, Fred S Dietrich
    posted to no-tag by lp2 on 2007-08-21 11:22:03 as *** along with 1 person and 3 groups dalloliogm Web2 splicing yeast
  • Biological network mapping and source signal deduction
    Bioinformatics, Vol. 23, No. 14. (15 July 2007), pp. 1783-1791.
    by Mark P Brynildsen, Tung-Yun Wu, Shi-Shang Jang, James C Liao
    posted to no-tag by lp2 on 2007-08-09 13:59:48 as ***
  • Logistic regression protects against population structure in genetic association studies
    Genome Res., Vol. 16, No. 2. (1 February 2006), pp. 290-296.
    by Efrosini Setakis, Heide Stirnadel, David J Balding
    posted to no-tag by lp2 on 2007-08-02 14:42:08 as *** along with 3 people oilcan sriram_s djkt
  • Population Structure and Eigenanalysis
    PLoS Genetics, Vol. 2, No. 12. (1 December 2006), e190.
    by Nick Patterson, Alkes L Price, David Reich
    posted to no-tag by lp2 on 2007-07-20 14:45:49 as *** along with 3 people sriram_s ryanraaum dalexander
  • Comprehensive DNA Signature Discovery and Validation
    PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e98.
    by Adam M Phillippy, Jacquline A Mason, Kunmi Ayanbule, Daniel D Sommer, Elisa Taviani, Anwar Huq, Rita R Colwell, Ivor T Knight, Steven L Salzberg
    posted to motifs signatures by lp2 on 2007-05-29 15:52:49 as ***
  • The environmental contribution to gene expression profiles
    Nature Reviews Genetics, Vol. 9, No. 8., pp. 575-581.
    by Greg Gibson
    posted to expression association by lp2 on 2008-07-21 12:40:07 as ** along with 1 person tmmurali
  • The evolution of courtship behaviors through the origination of a new gene in Drosophila
    PNAS
    posted to no-tag by lp2 on 2008-07-18 11:06:58 as **
  • Symbiotic gut microbes modulate human metabolic phenotypes.
    Proc Natl Acad Sci U S A, Vol. 105, No. 6. (12 February 2008), pp. 2117-2122.
    by M Li, B Wang, M Zhang, M Rantalainen, S Wang, H Zhou, Y Zhang, J Shen, X Pang, M Zhang, H Wei, Y Chen, H Lu, J Zuo, M Su, Y Qiu, W Jia, C Xiao, LM Smith, S Yang, E Holmes, H Tang, G Zhao, JK Nicholson, L Li, L Zhao
    posted to microbes jclub by lp2 on 2008-06-30 09:26:18 as ** along with 2 people madhadron wenhan
  • Evolution of Mammals and Their Gut Microbes
    Science, Vol. 320, No. 5883. (20 June 2008), pp. 1647-1651.
    by Ruth E Ley, Micah Hamady, Catherine Lozupone, Peter J Turnbaugh, Rob R Ramey, Stephen J Bircher, Michael L Schlegel, Tammy A Tucker, Mark D Schrenzel, Rob Knight, Jeffrey I Gordon
    posted to microbes jclub by lp2 on 2008-06-30 09:25:51 as ** along with 3 people and 1 group dchughes djkt dinnes iSEEM
  • Conservation of small RNA pathways in platypus
    Genome Res. (7 May 2008), gr.073056.107.
    by Elizabeth P Murchison, Pouya Kheradpour, Ravi Sachidanandam, Carly Smith, Emily Hodges, Zhenyu Xuan, Manolis Kellis, Frank Grutzner, Alexander Stark, Gregory J Hannon
    posted to profiling mirna by lp2 on 2008-06-04 14:24:09 as ** along with 3 people and 1 group reyez heliopais ealloza microRNA
  • The new paradigm of flow cell sequencing
    Genome Res., Vol. 18, No. 6. (1 June 2008), pp. 839-846.
    by Robert A Holt, Steven J Jones
    posted to sequencing dna by lp2 on 2008-06-03 17:51:02 as ** along with 11 people and 1 group dchughes serdarbozdag hpaces balicea tharris reyez caseybrown GustavoLacerda kintoki stajich tmmurali Berkeley Mycology
  • A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation
    PLoS Computational Biology, Vol. 5, No. 4. (May 2008)
    by S Eddy
    posted to no-tag by lp2 on 2008-06-03 17:16:02 as ** along with 3 people Ema reyez cabbagesofdoom
  • EM-Random Forest and New Measures of Variable Importance for Multi-Locus Quantitative Trait Linkage Analysis.
    Bioinformatics (Oxford, England) (21 May 2008)
    by Sophia S F S Lee, Lei Sun, Rafal Kustra, Shelley B B Bull
    posted to ml association by lp2 on 2008-05-30 13:32:13 as **
  • Statistical Power of Expression Quantitative Trait Loci for Mapping of Complex Trait Loci in Natural Populations
    Genetics, Vol. 178, No. 4. (1 April 2008), pp. 2201-2216.
    by Paul Schliekelman
    posted to power eqtl association by lp2 on 2008-05-19 13:36:10 as ** along with 2 people jyuh caseybrown
  • Finding genes that underlie complex traits.
    Science, Vol. 298, No. 5602. (20 December 2002), pp. 2345-2349.
    by AM Glazier, JH Nadeau, TJ Aitman
    posted to variation phenotype association by lp2 on 2008-05-19 13:34:28 as ** along with 1 person fisherp
  • The allelic architecture of human disease genes: common disease-common variant... or not?
    Hum. Mol. Genet., Vol. 11, No. 20. (1 October 2002), pp. 2417-2423.
    by Jonathan K Pritchard, Nancy J Cox
    posted to variation disease association by lp2 on 2008-05-19 13:34:04 as **
  • The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes
    Science, Vol. 320, No. 5874. (18 April 2008), pp. 362-365.
    by Maureen E Hillenmeyer, Eula Fung, Jan Wildenhain, Sarah E Pierce, Shawn Hoon, William Lee, Michael Proctor, St, Mike Tyers, Daphne Koller, Russ B Altman, Ronald W Davis, Corey Nislow, Guri Giaever
    posted to yeast phenotype by lp2 on 2008-05-12 13:08:52 as ** along with 6 people and 1 group chasmand roys bala stajich tmmurali nfreed Berkeley Mycology
  • Genome analysis of the platypus reveals unique signatures of evolution
    Nature, Vol. 453, No. 7192. (May 2008), pp. 175-183.
    posted to genome by lp2 on 2008-05-09 10:51:08 as ** along with 9 people pbull Tominator ealloza hpaces natstreet cabbagesofdoom gjuggler fhsantanna neils
  • Lessons from studying monogenic disease for common disease.
    Human molecular genetics, Vol. 15 Spec No 1 (15 April 2006)
    by L Peltonen, M Perola, J Naukkarinen, A Palotie
    posted to rare_alleles monogenic disease by lp2 on 2008-05-07 14:31:06 as **
  • Multiple Rare Alleles Contribute to Low Plasma Levels of HDL Cholesterol
    Science, Vol. 305, No. 5685. (6 August 2004), pp. 869-872.
    by Jonathan C Cohen, Robert S Kiss, Alexander Pertsemlidis, Yves L Marcel, Ruth Mcpherson, Helen H Hobbs
    posted to rare_alleles association by lp2 on 2008-05-07 14:27:07 as ** along with 4 people caseybrown vplagnol ramensky ryanraaum
  • MicroRNAs keeping cells in formation
    Nature Cell Biology, Vol. 10, No. 5., pp. 501-502.
    by Eric A Miska
    posted to no-tag by lp2 on 2008-05-06 14:08:49 as **
  • Mapping the Genetic Architecture of Gene Expression in Human Liver
    PLoS Biology, Vol. 6, No. 5. (1 May 2008), e107.
    by Eric E Schadt, Cliona Molony, Eugene Chudin, Ke Hao, Xia Yang, Pek Y Lum, Andrew Kasarskis, Bin Zhang, Susanna Wang, Christine Suver, Jun Zhu, Joshua Millstein, Solveig Sieberts, John Lamb, Debraj Guhathakurta, Jonathan Derry, John D Storey, Iliana Avila-Campillo, Mark J Kruger, Jason M Johnson, Carol A Rohl, Atila van Nas, Margarete Mehrabian, Thomas A Drake, Aldons J Lusis, Ryan C Smith, Peter F Guengerich, Stephen C Strom, Erin Schuetz, Thomas H Rushmore, Roger Ulrich
    posted to networks expression by lp2 on 2008-05-06 13:59:46 as ** along with 1 person Ema
  • Moving toward a system genetics view of disease.
    Mamm Genome (26 July 2007)
    by Solveig K Sieberts, Eric E Schadt
    posted to disease association by lp2 on 2008-04-30 10:12:34 as ** along with 4 people and 2 groups raiyar jyuh dchughes jo_davies G4ID Genetics-of-Gambling
  • MicroRNA-target pairs in the rat kidney identified by microRNA microarray, proteomic, and bioinformatic analysis.
    Genome Res (29 January 2008)
    by Zhongmin Tian, Andrew S S Greene, Jennifer L L Pietrusz, Isaac R R Matus, Mingyu Liang
    posted to targets microrna expression by lp2 on 2008-04-28 10:52:18 as ** along with 4 people and 1 group bootsy jyuh heliopais maralena microRNA
  • Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets
    Genome Res. (7 February 2008), gr.7080508.
    by David S Johnson, Wei Li, Benjamin D Gordon, Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S Carroll, Myles Brown, Paul Flicek, Christopher M Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J Farnham, Philipp Kapranov, David A Nix, Thomas R Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland Green, Jun S Song, Scott A Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M Myers, Jason D Lieb, Shirley X Liu
    posted to simulation chip-chip by lp2 on 2008-04-28 10:49:09 as ** along with 10 people and 2 groups gracio stajich magusina jfr kengg djkt xiaobeizhao cabbagezs idonaldson caseybrown Berkeley Mycology BergmanLab
  • The Argonaute protein family
    Genome Biology, Vol. 9 (26 February 2008), 210.
    by Julia Höck, Gunter Meister
    posted to review protein mirna argonaute by lp2 on 2008-04-28 10:41:52 as **
  • How to succeed in science: a concise guide for young biomedical scientists. Part I: taking the plunge
    Nat Rev Mol Cell Biol, Vol. 9, No. 5. (May 2008), pp. 413-416.
    by Jonathan W Yewdell
    posted to no-tag by lp2 on 2008-04-23 13:46:18 as ** along with 9 people and 1 group sci91078 phoenixzxl kengg sobolevnrm iramjohn tayzerhouse05 jyuh bmaust GeeSharpMinor baker-group
  • Gene-set approach for expression pattern analysis
    Brief Bioinform (17 January 2008), bbn001.
    by Dougu Nam, Seon-Young Kim
    posted to gene expression by lp2 on 2008-04-23 13:33:45 as ** along with 9 people klo beete yas tmmurali AlexanderPico heliopais giovenko seemu thomaskelder
  • Data and Theory Point to Mainly Additive Genetic Variance for Complex Traits
    PLoS Genetics, Vol. 4, No. 2. (February 2008)
    by Hill, Goddard, Visscher
    posted to association complex_trait evolution by lp2 on 2008-04-18 14:30:30 as ** along with 1 person osilander
  • Innate recognition of non-self nucleic acids
    Genome Biology, Vol. 9 (10 March 2008), 211.
    by Hongbo Chi, Richard A Flavell
    posted to acid immunity nucleic recognition by lp2 on 2008-04-18 13:21:44 as **
  • Genome assembly forensics: finding the elusive mis-assembly
    Genome Biology, Vol. 9 (14 March 2008), R55.
    by Adam M Phillippy, Michael C Schatz, Mihai Pop
    posted to algorithms assembly genome by lp2 on 2008-04-18 13:19:09 as ** along with 3 people GustavoLacerda Neeperando fernan
  • RNA-Binding Protein Dnd1 Inhibits MicroRNA Access to Target mRNA.
    Cell (19 December 2007)
    by Martijn Kedde, Markus J J Strasser, Bijan Boldajipour, Joachim A F A Oude Vrielink, Krasimir Slanchev, Carlos le Sage, Remco Nagel, P Mathijs M Voorhoeve, Josyanne van Duijse, Ulf Andersson Ørom, Anders H H Lund, Anastassis Perrakis, Erez Raz, Reuven Agami
    posted to inhibition microrna transcription by lp2 on 2008-04-18 13:08:45 as ** along with 1 person Alexander_Kanitz
  • Adaptive Evolution of Newly Emerged Micro-RNA Genes in Drosophila
    Mol Biol Evol, Vol. 25, No. 5. (1 May 2008), pp. 929-938.
    by Jian Lu, Yonggui Fu, Supriya Kumar, Yang Shen, Kai Zeng, Anlong Xu, Richard Carthew, Chung-I Wu
    posted to evolution microrna by lp2 on 2008-04-16 16:21:02 as ** along with 1 person and 1 group stajich Berkeley Mycology
  • Extracting expression modules from perturbational gene expression compendia
    BMC Systems Biology, Vol. 2, No. 1. (2008)
    by Steven Maere, Patrick Van Dijck, Martin Kuiper
    posted to expression ml modules networks by lp2 on 2008-04-14 11:32:28 as ** along with 2 people ptrobajo barriot
  • g:Profiler--a web-based toolset for functional profiling of gene lists from large-scale experiments.
    Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007)
    by J Reimand, M Kull, H Peterson, J Hansen, J Vilo
    posted to genes profiling statistics by lp2 on 2008-04-13 20:55:34 as ** along with 3 people and 1 group jyuh jfr ealloza BioinfoCIPF
  • Common Single-Nucleotide Polymorphisms Act in Concert to Affect Plasma Levels of High-Density Lipoprotein Cholesterol
    American Journal of Human Genetics, Vol. 81 (2007), pp. 1298-1303.
    by V Spirin, S Schmidt, A Pertsemlidis, RS Cooper, JC Cohen, SR Sunyaev
    posted to association human by lp2 on 2008-04-13 20:35:48 as **
  • Genome-wide association scan of tag SNPs identifies a susceptibility locus for lung cancer at 15q25.1
    Nature Genetics (April 2008)
    by Christopher
    posted to association cancer by lp2 on 2008-04-09 09:53:53 as **
  • A susceptibility locus for lung cancer maps to nicotinic acetylcholine receptor subunit genes on 15q25
    Nature, Vol. 452, No. 7187. (3 April 2008), pp. 633-637.
    by Rayjean J Hung, James D Mckay, Valerie Gaborieau, Paolo Boffetta, Mia Hashibe, David Zaridze, Anush Mukeria, Neonilia Szeszenia-Dabrowska, Jolanta Lissowska, Peter Rudnai, Eleonora Fabianova, Dana Mates, Vladimir Bencko, Lenka Foretova, Vladimir Janout, Chu Chen, Gary Goodman, John K Field, Triantafillos Liloglou, George Xinarianos, Adrian Cassidy, John Mclaughlin, Geoffrey Liu, Steven Narod, Hans E Krokan, Frank Skorpen, Maiken B Elvestad, Kristian Hveem, Lars Vatten, Jakob Linseisen, Francoise Clavel-Chapelon, Paolo Vineis, Bas H Bueno-De-Mesquita, Eiliv Lund, Carmen Martinez, Sheila Bingham, Torgny Rasmuson, Pierre Hainaut, Elio Riboli, Wolfgang Ahrens, Simone Benhamou, Pagona Lagiou, Dimitrios Trichopoulos, Ivana Holcatova, Franco Merletti, Kristina Kjaerheim, Antonio Agudo, Gary Macfarlane, Renato Talamini, Lorenzo Simonato, Ray Lowry, David I Conway, Ariana Znaor, Claire Healy, Diana Zelenika, Anne Boland, Marc Delepine, Mario Foglio, Doris Lechner, Fumihiko Matsuda, Helene Blanche, Ivo Gut, Simon Heath, Mark Lathrop, Paul Brennan
    posted to association cancer by lp2 on 2008-04-09 09:50:42 as ** along with 3 people MPEYTO Petersarkies caseybrown
  • A Gene-Coexpression Network for Global Discovery of Conserved Genetic Modules
    Science, Vol. 302, No. 5643. (10 October 2003), pp. 249-255.
    by Joshua M Stuart, Eran Segal, Daphne Koller, Stuart K Kim
    posted to coexpression expression networks by lp2 on 2008-04-07 11:21:37 as ** along with 13 people and 5 groups dragonrez textoris lfriedl balajis nuke2005 maryee tardigrade opheliav wnpx neveaire macle raylim karfunkel kdl Biostatistics Computational-Genomics Bioinformatics Neuroscience
  • Singular value decomposition for genome-wide expression data processing and modeling.
    Proc Natl Acad Sci U S A, Vol. 97, No. 18. (29 August 2000), pp. 10101-10106.
    by O Alter, PO Brown, D Botstein
    posted to expression by lp2 on 2008-04-06 14:44:37 as ** along with 5 people and 1 group balajis ccpin justescaped akastrin pazpark PTT
  • Variations in DNA elucidate molecular networks that cause disease
    Nature (16 March 2008)
    by Yanqing Chen, Jun Zhu, Pek Y Lum, Xia Yang, Shirly Pinto, Douglas J Macneil, Chunsheng Zhang, John Lamb, Stephen Edwards, Solveig K Sieberts, Amy Leonardson, Lawrence W Castellini, Susanna Wang, Marie-France Champy, Bin Zhang, Valur Emilsson, Sudheer Doss, Anatole Ghazalpour, Steve Horvath, Thomas A Drake, Aldons J Lusis, Eric E Schadt
    posted to expression genetics variation by lp2 on 2008-03-30 21:37:36 as ** along with 11 people and 1 group chrisamiller echinotrix jyuh natstreet sanchezbuelna djkt raiyar jo_davies shikin caseybrown ptrobajo GeneGo
  • Genetics of gene expression and its effect on disease
    Nature (16 March 2008)
    by Valur Emilsson, Gudmar Thorleifsson, Bin Zhang, Amy S Leonardson, Florian Zink, Jun Zhu, Sonia Carlson, Agnar Helgason, Bragi G Walters, Steinunn Gunnarsdottir, Magali Mouy, Valgerdur Steinthorsdottir, Gudrun H Eiriksdottir, Gyda Bjornsdottir, Inga Reynisdottir, Daniel Gudbjartsson, Anna Helgadottir, Aslaug Jonasdottir, Adalbjorg Jonasdottir, Unnur Styrkarsdottir, Solveig Gretarsdottir, Kristinn P Magnusson, Hreinn Stefansson, Ragnheidur Fossdal, Kristleifur Kristjansson, Hjortur G Gislason, Tryggvi Stefansson, Bjorn G Leifsson, Unnur Thorsteinsdottir, John R Lamb, Jeffrey R Gulcher, Marc L Reitman, Augustine Kong, Eric E Schadt, Kari Stefansson
    posted to expression genetics by lp2 on 2008-03-30 21:36:22 as ** along with 12 people and 1 group echinotrix Borelli jyuh smbe2008 natstreet sanchezbuelna djkt jo_davies shikin caseybrown ptrobajo vplagnol GeneGo
  • Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome.
    Am J Hum Genet, Vol. 79, No. 2. (August 2006), pp. 275-290.
    by DP Locke, AJ Sharp, SA McCarroll, SD McGrath, TL Newman, Z Cheng, S Schwartz, DG Albertson, D Pinkel, DM Altshuler, EE Eichler
    posted to cnv heritability human linkage by lp2 on 2008-03-25 10:24:45 as **
  • The Geometry of Musical Chords
    Science, Vol. 313, No. 5783. (7 July 2006), pp. 72-74.
    by Dmitri Tymoczko
    posted to chords music by lp2 on 2008-03-13 09:58:56 as ** along with 5 people and 3 groups dbikard eyliu livingthingdan cerkut Quotato Centre de Recherches Interdisciplinaires livingthing contact-id
  • Medical sequencing at the extremes of human body mass.
    Am J Hum Genet, Vol. 80, No. 4. (April 2007), pp. 779-791.
    by N Ahituv, N Kavaslar, W Schackwitz, A Ustaszewska, J Martin, S Hebert, H Doelle, B Ersoy, G Kryukov, S Schmidt, N Yosef, E Ruppin, R Sharan, C Vaisse, S Sunyaev, R Dent, J Cohen, R McPherson, LA Pennacchio
    posted to association sequencing by lp2 on 2008-03-12 16:43:29 as ** along with 2 people balicea ramensky
  • Systematic discovery of in vivo phosphorylation networks.
    Cell, Vol. 129, No. 7. (29 June 2007), pp. 1415-1426.
    by R Linding, LJ Jensen, GJ Ostheimer, MA van Vugt, C Jørgensen, IM Miron, F Diella, K Colwill, L Taylor, K Elder, P Metalnikov, V Nguyen, A Pasculescu, J Jin, JG Park, LD Samson, JR Woodgett, RB Russell, P Bork, MB Yaffe, T Pawson
    posted to networks phosphorylation protein by lp2 on 2008-03-10 14:56:40 as ** along with 14 people and 2 groups chad_davis carlk daed Evangelia renatomilani jyuh skhadar julius zwang cdppublications psique robrussell snowcrash larsjuhljensen SysbioMPI-TCells Durbin group
  • On the Utility of Linkage Disequilibrium as a Statistic for Identifying Targets of Positive Selection in Nonequilibrium Populations
    Genetics, Vol. 176, No. 4. (1 August 2007), pp. 2371-2379.
    by Jeffrey D Jensen, Kevin R Thornton, Carlos D Bustamante, Charles F Aquadro
    posted to linkage population selection by lp2 on 2008-02-26 16:10:24 as ** along with 2 people and 1 group ryanraaum dmc Durbin group
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