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mapplab library [86 articles]

Статьи, недавно добавленные в библиотеку mapplab .
  • MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation
    The EMBO Journal, Vol. aop, No. current. (19 July 2007)
    by Hye-Kyung Lee, Ui-Hyun Park, Eun-Joo Kim, Soo-Jong Um
    posted to transcription rarrxr med25 med1 lxxll cbp by mapplab on 2008-08-14 21:04:39 as ** along with 1 person amwands
  • Mediator and p300/CBP-Steroid Receptor Coactivator Complexes Have Distinct Roles, but Function Synergistically, during Estrogen Receptor alpha-Dependent Transcription with Chromatin Templates
    Mol. Cell. Biol., Vol. 23, No. 1. (1 January 2003), pp. 335-348.
    by Mari L Acevedo, Lee W Kraus
    posted to srcs p300 mediator estrogen-receptor cbp by mapplab on 2008-08-14 21:02:22 as ** along with 1 person amwands
  • Peptides Selected to Bind the Gal80 Repressor Are Potent Transcriptional Activation Domains in Yeast
    J. Biol. Chem., Vol. 275, No. 20. (12 May 2000), pp. 14979-14984.
    by Ying Han, Thomas Kodadek
    posted to yeast transcription repressor peptides gal80 by mapplab on 2008-08-14 20:58:22 as ** along with 1 person amwands
  • Structural insight into the TFIIE[ndash]TFIIH interaction: TFIIE and p53 share the binding region on TFIIH
    The EMBO Journal, Vol. aop, No. current. (20 March 2008)
    by Masahiko Okuda, Aki Tanaka, Manami Satoh, Shoko Mizuta, Manabu Takazawa, Yoshiaki Ohkuma, Yoshifumi Nishimura
    posted to tfiih tfiie p53 nmr-structure journalclub by mapplab on 2008-08-14 20:34:49 as **
  • Mediator-Dependent Recruitment of TFIIH Modules in Preinitiation Complex
    Molecular Cell, Vol. 31, No. 3. (8 August 2008), pp. 337-346.
    by Cyril Esnault, Yad Ghavi-Helm, Sylvain Brun, Julie Soutourina, Nynke Van Berkum, Claire Boschiero, Frank Holstege, Michel Werner
    posted to transcription tfiih rad3 mediator med22 med17 med11 by mapplab on 2008-08-14 20:31:14 as **
  • GATA transcription factors directly regulate the Parkinson's disease-linked gene α-synuclein
    Proceedings of the National Academy of Sciences, Vol. 105, No. 31. (2008), pp. 10907-10912.
    by Clemens R Scherzer, Jeffrey A Grass, Zhixiang Liao, Imelda Pepivani, Bin Zheng, Aron C Eklund, Paul A Ney, Juliana Ng, Meghan Mcgoldrick, Brit Mollenhauer, Emery H Bresnick, Michael G Schlossmacher
    posted to transcription parkinsons-disease journalclub gata er-gata-construct by mapplab on 2008-08-14 20:27:40 as **
  • Herpesvirus tegument protein activates NF-κB signaling through the TRAF6 adaptor protein
    Proceedings of the National Academy of Sciences, Vol. 105, No. 32. (2008), pp. 11335-11339.
    by Xueqiao Liu, Katherine Fitzgerald, Evelyn Kurt-Jones, Robert Finberg, David M Knipe
    posted to p65 nf-kb journalclub herpesvirus by mapplab on 2008-08-14 20:23:18 as **
  • A General Method for Discovering Inhibitors of Protein−DNA Interactions Using Photonic Crystal Biosensors
    ACS Chem. Biol., Vol. 3, No. 7. (18 July 2008), pp. 437-448.
    by Leo L Chan, Maria Pineda, James T Heeres, Paul J Hergenrother, Brian T Cunningham
    posted to small-molecule protein-dna photonic-crystal-biosensor journalclub high-throughput-screen dbd by mapplab on 2008-08-14 20:20:22 as **
  • FLASH acts as a co-activator of the transcription factor c-Myb and localizes to active RNA polymerase II foci
    Oncogene, Vol. aop, No. current.
    by AH Alm-Kristiansen, T Sæther, V Matre, S Gilfillan, Dahle, OS Gabrielsen
    posted to transcription rna-polii journalclub immunochemistry flash c-myb cajal-bodies by mapplab on 2008-08-14 20:18:38 as **
  • Mediator Links Epigenetic Silencing of Neuronal Gene Expression with X-Linked Mental Retardation
    Molecular Cell, Vol. 31, No. 3. (8 August 2008), pp. 347-359.
    by Ning Ding, Haiying Zhou, Pierre-Olivier Esteve, Hang G Chin, Seokjoong Kim, Xuan Xu, Sumy M Joseph, Michael J Friez, Charles E Schwartz, Sriharsa Pradhan, Thomas G Boyer
    posted to rtpcr pull-down mediator med12 journalclub immunochemistry epigenetics by mapplab on 2008-08-07 20:24:14 as **
  • Physical and Functional Interactions of Monoubiquitylated Transactivators with the Proteasome
    J. Biol. Chem., Vol. 283, No. 31. (1 August 2008), pp. 21789-21798.
    by Chase T Archer, Lyle Burdine, Bo Liu, Anwarul Ferdous, Stephen A Johnston, Thomas Kodadek
    posted to vp16 transcription proteosome journalclub gal4 crosslinking activator by mapplab on 2008-08-07 19:58:59 as **
  • Mdm2 Promotes Genetic Instability and Transformation Independent of p53
    Mol. Cell. Biol., Vol. 28, No. 15. (1 August 2008), pp. 4862-4874.
    by Alyssa Bouska, Tamara Lushnikova, Silvia Plaza, Christine M Eischen
    posted to mdm2 journalclub dna-damage cancer by mapplab on 2008-08-07 19:56:52 as **
  • Requirement of histone deacetylase1 (HDAC1) in signal transducer and activator of transcription 3 (STAT3) nucleocytoplasmic distribution
    Nucl. Acids Res., Vol. 36, No. 13. (1 August 2008), pp. 4510-4520.
    by Sutapa Ray, Chang Lee, Tieying Hou, Istvan Boldogh, Allan R Brasier
    posted to stat3 pull-down journalclub hdac by mapplab on 2008-08-07 19:54:45 as ** along with 1 person epigenetics
  • The yeast SWI-SNF complex facilitates binding of a transcriptional activator to nucleosomal sites in vivo.
    Molecular and cellular biology, Vol. 17, No. 8. (August 1997), pp. 4811-4819.
    by LG Burns, CL Peterson
    posted to gal4 dna chromatin binding activator by mapplab on 2008-08-05 22:39:01 as ***
  • Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes
    Mol. BioSyst., Vol. 4, No. 8. (2008), pp. 816-823.
    by Young J Lee
    posted to structure review protein-protein crosslinking by mapplab on 2008-07-30 19:30:54 as **
  • Targeting transcription factors for therapeutic benefit
    Mol. BioSyst. (2008)
    by Paul Brennan, Rossen Donev, Saman Hewamana
    posted to transcription review oligionucleotide dbd by mapplab on 2008-07-24 15:25:22 as **
  • The role of FoxO in the regulation of metabolism
    Oncogene, Vol. 27, No. 16. (0000), pp. 2320-2336.
    by DN Gross, APJ van den Heuvel, MJ Birnbaum
    posted to transcription review metabolism foxo1 forkhead-proteins caloric-restriction activator by mapplab on 2008-07-23 19:44:34 as **
  • Selective inhibition of activated but not basal transcription by the acidic activation domain of VP16: Evidence for transcriptional adaptors
    Cell, Vol. 61, No. 7. (29 June 1990), pp. 1199-1208.
    by Shelley L Berger, Douglas W Cress, Andrea Cress, Steven J Triezenberg, Leonard Guarente
    posted to vp16 squelching inhibition basal-transcription activator by mapplab on 2008-07-23 19:39:10 as **
  • Critical structural elements of the VP16 transcriptional activation domain
    Science, Vol. 251, No. 4989. (4 January 1991), pp. 87-90.
    by WD Cress, SJ Triezenberg
    posted to vp16 mutagenesis mapplab-classic helix activator by mapplab on 2008-07-23 19:37:07 as **
  • Transcriptional Activation Domain of the Herpesvirus Protein VP16 Becomes Conformationally Constrained upon Interaction with Basal Transcription Factors
    J. Biol. Chem., Vol. 271, No. 9. (1 March 1996), pp. 4827-4837.
    by Fan Shen, Steven J Triezenberg, Preston Hensley, Denise Porter, Jay R Knutson
    posted to vp16 tbp helix binding-study by mapplab on 2008-07-23 19:33:23 as **
  • Mutational analysis of a transcriptional activation region of the VP16 protein of herpes simplex virus
    Nucl. Acids Res., Vol. 26, No. 19. (1 October 1998), pp. 4487-4496.
    by SM Sullivan, PJ Horn, VA Olson, AH Koop, W Niu, RH Ebright, SJ Triezenberg
    posted to vp16 transcription mutagenesis mapplab-classic activator by mapplab on 2008-07-23 19:31:25 as **
  • Solid Phase Synthesis of Polyamides Containing Imidazole and Pyrrole Amino Acids
    Journal of the American Chemical Society, Vol. 118, No. 26. (1996), pp. 6141-6146.
    by EE Baird, PB Dervan
    posted to synthetic-molecule solid-phase-synthesis polyamide by mapplab on 2008-07-22 22:49:16 as **
  • The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing
    Science (1 May 2008), 1158441.
    by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder
    posted to yeast transcription rna-seq network by mapplab on 2008-07-22 22:22:09 as ** along with 13 people and 1 group bpcusack shurjo GeeSharpMinor urgi faion semrich biomcgary djkt chad_davis Retchless gjuggler caseybrown stajich Berkeley Mycology
  • Ordered Cooperative Functions of PRMT1, p300, and CARM1 in Transcriptional Activation by p53
    Cell, Vol. 117, No. 6. (11 June 2004), pp. 735-748.
    by Woojin An, Jaehoon Kim, Robert G Roeder
    posted to transcription timing synergy p53 p300 charm1 by mapplab on 2008-07-22 22:18:37 as **
  • Genetic reconstruction of a functional transcriptional regulatory network.
    Nat Genet (8 April 2007)
    by Zhanzhi Hu, Patrick J J Killion, Vishwanath R R Iyer
    posted to yeast transcription network by mapplab on 2008-07-22 22:13:38 as ** along with 10 people and 6 groups siebert czeller dpollard xico nickluscombe zwang lizabeth dejori xingxu naegele Bioinformatics EisenLab WetBiology EBI-regulation ic4 generif_paper
  • MED1/TRAP220 Exists Predominantly in a TRAP/ Mediator Subpopulation Enriched in RNA Polymerase II and Is Required for ER-Mediated Transcription
    Molecular Cell, Vol. 19, No. 1. (1 July 2005), pp. 89-100.
    by Xiaoting Zhang, Andrew Krutchinsky, Aya Fukuda, Wei Chen, Soichiro Yamamura, Brian T Chait, Robert G Roeder
    posted to rna-polii nuclear-receptor mediator-complex mediator med1 estrogen-receptor by mapplab on 2008-07-22 18:09:52 as **
  • Human Mediator Enhances Basal Transcription by Facilitating Recruitment of Transcription Factor IIB during Preinitiation Complex Assembly
    J. Biol. Chem., Vol. 281, No. 22. (2 June 2006), pp. 15172-15181.
    by Hwa J Baek, Yun K Kang, Robert G Roeder
    posted to tfiib rna-polii mediator-bypass mediator basal-transcription by mapplab on 2008-07-22 18:06:43 as **
  • Alternative Mechanisms by Which Mediator Subunit MED1/TRAP220 Regulates Peroxisome Proliferator-Activated Receptor gamma-Stimulated Adipogenesis and Target Gene Expression
    Mol. Cell. Biol., Vol. 28, No. 3. (1 February 2008), pp. 1081-1091.
    by Kai Ge, Young-Wook Cho, Hong Guo, Teresa B Hong, Mohamed Guermah, Mitsuhiro Ito, Hong Yu, Markus Kalkum, Robert G Roeder
    posted to ppary nuclear-receptor mediator med24 med1 lxxll by mapplab on 2008-07-22 18:02:49 as **
  • A triad of subunits from the Gal11/tail domain of Srb mediator is an in vivo target of transcriptional activator Gcn4p.
    Mol Cell Biol, Vol. 24, No. 15. (August 2004), pp. 6871-6886.
    by F Zhang, L Sumibcay, AG Hinnebusch, MJ Swanson
    posted to yeast pull-down mediator med3 med16 med15gal11 mapplab-classic gcn4 by mapplab on 2008-07-22 17:58:24 as ** along with 1 person hplatero
  • A high resolution protein interaction map of the yeast Mediator complex.
    Nucleic Acids Res, Vol. 32, No. 18. (2004), pp. 5379-5391.
    by B Guglielmi, NL van Berkum, B Klapholz, T Bijma, M Boube, C Boschiero, HM Bourbon, FC Holstege, M Werner
    posted to yeast mediator by mapplab on 2008-07-22 17:53:52 as ** along with 1 person hplatero
  • Interdependent recruitment of SAGA and Srb mediator by transcriptional activator Gcn4p.
    Mol Cell Biol, Vol. 25, No. 9. (May 2005), pp. 3461-3474.
    by H Qiu, C Hu, F Zhang, GJ Hwang, MJ Swanson, C Boonchird, AG Hinnebusch
    posted to transcription srb saga mediator gcn4 by mapplab on 2008-07-21 21:08:16 as ** along with 1 person hplatero
  • Global landscape of protein complexes in the yeast Saccharomyces cerevisiae
    Nature (22 March 2006)
    by Nevan J Krogan, Gerard Cagney, Haiyuan Yu, Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P Tikuisis, Thanuja Punna, Josã© M Peregrã­n-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D Robinson, Alberto Paccanaro, James E Bray, Anthony Sheung, Bryan Beattie, Dawn P Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R Collins, Shamanta Chandran, Robin Haw, Jennifer J Rilstone, Kiran Gandi, Natalie J Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy HY Lam, Gareth Butland, Amin M Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S Weissman, James C Ingles, Timothy R Hughes, John Parkinson, Mark Gerstein, Shoshana J Wodak, Andrew Emili, Jack F Greenblatt
    posted to yeast protein-protein mediator by mapplab on 2008-07-21 21:05:15 as ** along with 21 people and 4 groups ethkim chasmand hplatero frohike carlk Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu kdl EBI-regulation BioinfoCIPF SGU-CIPF
  • The mediator coactivator complex: functional and physical roles in transcriptional regulation.
    J Cell Sci, Vol. 116, No. Pt 18. (15 September 2003), pp. 3667-3675.
    by BA Lewis, D Reinberg
    posted to transcription review assembly by mapplab on 2008-07-21 21:04:16 as ** along with 1 person hplatero
  • The structural and functional organization of the yeast mediator complex.
    J Biol Chem, Vol. 276, No. 45. (9 November 2001), pp. 42003-42010.
    by JS Kang, SH Kim, MS Hwang, SJ Han, YC Lee, YJ Kim
    posted to yeast transcription mediator by mapplab on 2008-07-21 21:02:13 as ** along with 1 person hplatero
  • HaloTag: A Novel Protein Labeling Technology for Cell Imaging and Protein Analysis
    ACS Chem. Biol. (6 June 2008)
    by Georgyi V Los, Lance P Encell, Mark G Mcdougall, Danette D Hartzell, Natasha Karassina, Chad Zimprich, Monika G Wood, Randy Learish, Rachel F Ohana, Marjeta Urh, Dan Simpson, Jacqui Mendez, Kris Zimmerman, Paul Otto, Gediminas Vidugiris, Ji Zhu, Aldis Darzins, Dieter H Klaubert, Robert F Bulleit, Keith V Wood
    posted to synthetic-molecule protein-protein journalclub interactions halotag by mapplab on 2008-07-21 20:53:40 as ** along with 2 people and 1 group melting samjlord moernerlab
  • A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
    Journal of Molecular Biology, Vol. 381, No. 2. (29 August 2008), pp. 407-418.
    by Ryan N Gilbreth, Kaori Esaki, Akiko Koide, Sachdev S Sidhu, Shohei Koide
    posted to protein-protein journalclub interactions by mapplab on 2008-07-21 20:52:37 as ** along with 2 people zwang phoenixzxl
  • PIASy Represses CCAAT/Enhancer-binding Protein delta (C/EBPdelta) Transcriptional Activity by Sequestering C/EBPdelta to the Nuclear Periphery
    J. Biol. Chem., Vol. 283, No. 29. (18 July 2008), pp. 20137-20148.
    by Shanggen Zhou, Junling Si, Tong Liu, James W Dewille
    posted to transcription regulator piasy nuclear-localization journalclub cebp by mapplab on 2008-07-21 20:51:26 as ** along with 1 person icq242500260
  • Modulation of Gene Expression via Disruption of NF-kappaB Signaling by a Bacterial Small Molecule
    Science, Vol. 321, No. 5886. (11 July 2008), pp. 259-263.
    by Vladimir V Kravchenko, Gunnar F Kaufmann, John C Mathison, David A Scott, Alexander Z Katz, David C Grauer, Mandy Lehmann, Michael M Meijler, Kim D Janda, Richard J Ulevitch
    posted to small-molecule nf-kb journalclub bacteria by mapplab on 2008-07-21 20:49:42 as **
  • Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds
    Nature Biotechnology, Vol. 26, No. 7. (22 June 2008), pp. 795-797.
    by Danwei Huangfu, René Maehr, Wenjun Guo, Astrid Eijkelenboom, Melinda Snitow, Alice E Chen, Douglas A Melton
    posted to stem-cells oct4 master-regulator journalclub by mapplab on 2008-07-21 20:46:55 as ** along with 4 people and 1 group ajaymalik kjglennie MllePapillon wsjames Oxford Virology
  • Assessing the permissiveness of transcriptional activator binding sites
    Biopolymers, Vol. 89, No. 7. (2008), pp. 578-581.
    by Steven P Rowe, Anna K Mapp
    posted to transcription peptoids peptides kix b-peptides binding-study activator by mapplab on 2008-07-21 20:43:44 as **
  • Expanding the repertoire of small molecule transcriptional activation domains
    Bioorganic & Medicinal Chemistry, Vol. In Press, Corrected Proof
    by Ryan J Casey, Jean-Paul Desaulniers, Jonas W Hojfeldt, Anna K Mapp
    posted to transcription specificity mammalian isoxazolidine in-vivo activator by mapplab on 2008-07-21 20:42:57 as **
  • Transcriptional Up-regulation in Cells Mediated by a Small Molecule
    J. Am. Chem. Soc., Vol. 129, No. 35. (5 September 2007), pp. 10654-10655.
    by SP Rowe, RJ Casey, BB Brennan, SJ Buhrlage, AK Mapp
    posted to transcription mammalian isoxazolidine in-vivo activator by mapplab on 2008-07-21 20:41:55 as **
  • Towards a minimal motif for artificial transcriptional activators
    Chemistry & Biology, Vol. 8, No. 6. (June 2001), pp. 583-592.
    by Aseem Z Ansari, Anna K Mapp, Doan H Nguyen, Peter B Dervan, Mark Ptashne
    posted to transcription synthetic-activator polyamide peptides activator by mapplab on 2008-07-21 20:41:03 as **
  • Activation of gene expression by small molecule transcription factors.
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 8. (11 April 2000), pp. 3930-3935.
    by AK Mapp, AZ Ansari, M Ptashne, PB Dervan
    posted to transcription synthetic-activator polyamide peptides activator by mapplab on 2008-07-21 20:40:17 as **
  • Modular design of artificial transcription factors
    Current Opinion in Chemical Biology, Vol. 6, No. 6. (1 December 2002), pp. 765-772.
    by Aseem Z Ansari, Anna K Mapp
    posted to transcription review polyamide activator by mapplab on 2008-07-21 20:39:37 as **
  • Targeting the Transcriptional Machinery with Unique Artificial Transcriptional Activators
    J. Am. Chem. Soc., Vol. 125, No. 41. (15 October 2003), pp. 12390-12391.
    by Z Wu, G Belanger, BB Brennan, JK Lum, AR Minter, SP Rowe, A Plachetka, CY Majmudar, AK Mapp
    posted to protein-protein peptides med15gal11 binding-study activator by mapplab on 2008-07-21 20:38:04 as **
  • A Small Molecule Transcriptional Activation Domain
    J. Am. Chem. Soc., Vol. 126, No. 34. (1 September 2004), pp. 10504-10505.
    by AR Minter, BB Brennan, AK Mapp
    posted to small-molecule isoxazolidine in-vitro dbd activator 2-hybrid by mapplab on 2008-07-21 20:37:22 as **
  • Functional Specificity of Artificial Transcriptional Activators
    Chemistry & Biology, Vol. 12, No. 3. (March 2005), pp. 313-321.
    by Chinmay Y Majmudar, Jenifer K Lum, Lev Prasov, Anna K Mapp
    posted to synergy peptides med15gal11 activator by mapplab on 2008-07-21 20:36:18 as **
  • Artificial Transcriptional Activation Domains
    ChemBioChem, Vol. 6, No. 8. (2005), pp. 1311-1315.
    by Jenifer K Lum, Anna K Mapp
    posted to yeast peptides activator by mapplab on 2008-07-21 20:35:11 as read
  • Chemical approaches to transcriptional regulation
    Current Opinion in Chemical Biology, Vol. 9, No. 5. (October 2005), pp. 467-474.
    by Chinmay Y Majmudar, Anna K Mapp
    posted to transcription small-molecule review p53 by mapplab on 2008-07-21 20:33:56 as read
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