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marcius Список просмотра [1000+ articles]

Недавние статьи, marcius которые соответствуют критериям списка просмотра
  • GBParsy: A GenBank flatfile parser library with high speed
    BMC Bioinformatics, Vol. 9, No. 1. (2008)
    by Tae H Lee, Yeon K Kim, Baek H Nahm
    posted to parser methods bioinformatics by stajich on 2008-07-25 17:03:34 as ** along with 1 group Berkeley Mycology
  • On the application of the Arlequin method to the coupling of particle and continuum models
    Computational Mechanics, Vol. 42, No. 4. (2008), pp. 511-530.
    by Paul Bauman, Hachmi Dhia, Nadia Elkhodja, J Oden, Serge Prudhomme
    posted to multiscale mechanics mathematics by sobolevnrm on 2008-07-25 12:06:04 as read along with 1 group baker-group
  • Liquid Crystalline Phase Behavior of High Molecular Weight DNA: A Comparative Study of the Influence of Metal Ions of Different Size, Charge and Binding Mode
    Biomacromolecules, Vol. 9, No. 7. (14 July 2008), pp. 1860-1869.
    by Neethu Sundaresan, Cherumuttathu H Suresh, Thresia Thomas, TJ Thomas, CKS Pillai
    posted to solvation nucleic_acids electrostatics by sobolevnrm on 2008-07-25 12:02:47 as read along with 1 group baker-group
  • Salt-Mediated Electrostatics in the Association of TATA Binding Proteins to DNA: A Combined Molecular Mechanics/Poisson-Boltzmann Study
    Biophys. J., Vol. 94, No. 12. (15 June 2008), pp. 4634-4645.
    by Johan H Bredenberg, Cristina Russo, Marcia O Fenley
    posted to solvation protein-nucleic_acid_interactions electrostatics by sobolevnrm on 2008-07-25 11:56:27 as read along with 1 group baker-group
  • Interesting Structures: Education and Outreach at the RCSB Protein Data Bank
    PLoS Biology, Vol. 6, No. 5. (1 May 2008), e117.
    by Christine Zardecki
    posted to teaching structure database by sobolevnrm on 2008-07-25 11:50:16 as read along with 1 person and 1 group reyez baker-group
  • Synthesis and bioassay of improved mosquito repellents predicted from chemical structure
    Proceedings of the National Academy of Sciences, Vol. 105, No. 21. (2008), pp. 7359-7364.
    by Alan R Katritzky, Zuoquan Wang, Svetoslav Slavov, Maia Tsikolia, Dimitar Dobchev, Novruz G Akhmedov, Dennis C Hall, Ulrich R Bernier, Gary G Clark, Kenneth J Linthicum
    posted to drug_design by sobolevnrm on 2008-07-25 11:47:14 as read
  • Antisense starts making more sense
    Nat Biotech, Vol. 21, No. 4. (April 2003), pp. 371-372.
    by Gordon G Carmichael
    posted to rna by inesdesantiago on 2008-07-24 15:30:06 as **
  • Stem cell self-renewal versus differentiation: Tumor suppressor Mei-P26 and miRNAs control the balance
    Cell Res, Vol. 18, No. 7. (0000), pp. 713-715.
    by Run Shen, Ting Xie
    posted to rna review by inesdesantiago on 2008-07-24 14:57:25 as ****
  • A stringent test of the cavity concept in continuum dielectrics
    The Journal of Chemical Physics, Vol. 107, No. 19. (1997), pp. 7975-7978.
    by Arno Papazyan, Arieh Warshel
    posted to solvation electrostatics by sobolevnrm on 2008-07-24 12:44:14 as read along with 1 group baker-group
  • Continuum and Dipole-Lattice Models of Solvation
    J. Phys. Chem. B, Vol. 101, No. 51. (18 December 1997), pp. 11254-11264.
    by A Papazyan, A Warshel
    posted to solvation electrostatics by sobolevnrm on 2008-07-24 12:43:04 as read along with 1 group baker-group
  • Effect of Solvent Discreteness on Solvation
    J. Phys. Chem. B, Vol. 102, No. 27. (2 July 1998), pp. 5348-5357.
    by A Papazyan, A Warshel
    posted to solvation electrostatics by sobolevnrm on 2008-07-24 12:41:40 as read along with 1 group baker-group
  • Factor Va Alters the Conformation of the Na+-Binding Loop of Factor Xa in the Prothrombinase Complex
    Biochemistry, Vol. 47, No. 22. (3 June 2008), pp. 5976-5985.
    by Likui Yang, Chandrashekhara Manithody, Shabir H Qureshi, Alireza R Rezaie
    posted to thrombin by sobolevnrm on 2008-07-24 12:13:59 as read along with 1 group baker-group
  • Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS
    Nature, Vol. 453, No. 7191., pp. 124-127.
    by Raz Zarivach, Wanyin Deng, Marija Vuckovic, Heather B Felise, Hai V Nguyen, Samuel I Miller, Brett B Finlay, Natalie CJ Strynadka
    posted to structure apbs by sobolevnrm on 2008-07-24 12:11:50 as read along with 1 person and 1 group neils baker-group
  • Lipid bilayer structure determined by the simultaneous analysis of neutron and x-ray scattering data
    Biophys. J. (23 May 2008), biophysj.108.132662.
    by Norbert Kucerka, John F Nagle, Jonathan N Sachs, Scott Feller, Jeremy Pencer, Andrew J Jackson, John Katsaras
    posted to experimental_methodology biomembranes by sobolevnrm on 2008-07-24 12:08:34 as read along with 1 person and 1 group paulschlesinger baker-group
  • Membrane nanotubes: dynamic long-distance connections between animal cells
    Nature Reviews Molecular Cell Biology, Vol. 9, No. 6. (23 April 2008), pp. 431-436.
    by Daniel M Davis, Stefanie Sowinski
    posted to biomembranes by sobolevnrm on 2008-07-24 11:51:21 as read along with 1 person and 1 group lechristophe baker-group
  • A meshless, spectrally accurate, integral equation solver for molecular surface electrostatics
    J. Emerg. Technol. Comput. Syst., Vol. 4, No. 2. (April 2008), pp. 1-30.
    by Shih-Hsien Kuo, Bruce Tidor, Jacob White
    posted to solvation software mathematics electrostatics by sobolevnrm on 2008-07-24 11:45:11 as read along with 1 group baker-group
  • Structural mechanism of WASP activation by the enterohaemorrhagic E. coli effector EspFU
    Nature (23 July 2008)
    by Hui-Chun Cheng, Brian M Skehan, Kenneth G Campellone, John M Leong, Michael K Rosen
  • Spatio-temporal correlations and visual signalling in a complete neuronal population
    Nature (23 July 2008)
    by Jonathan W Pillow, Jonathon Shlens, Liam Paninski, Alexander Sher, Alan M Litke, EJ Chichilnisky, Eero P Simoncelli
  • The pathogen protein EspFU hijacks actin polymerization using mimicry and multivalency
    Nature (23 July 2008)
    by Nathan A Sallee, Gonzalo M Rivera, John E Dueber, Dan Vasilescu, Dyche R Mullins, Bruce J Mayer, Wendell A Lim
  • Cell-specific ATP7A transport sustains copper-dependent tyrosinase activity in melanosomes
    Nature (23 July 2008)
    by Subba, Danièle Tenza, Elena V Sviderskaya, Dorothy C Bennett, Graça Raposo, Michael S Marks
  • A blend of small molecules regulates both mating and development in Caenorhabditis elegans
    Nature (23 July 2008)
    by Jagan Srinivasan, Fatma Kaplan, Ramadan Ajredini, Cherian Zachariah, Hans T Alborn, Peter EA Teal, Rabia U Malik, Arthur S Edison, Paul W Sternberg, Frank C Schroeder
  • ESTGenes: alternative splicing from ESTs in Ensembl.
    Genome Res, Vol. 14, No. 5. (May 2004), pp. 976-987.
    by E Eyras, M Caccamo, V Curwen, M Clamp
    posted to transcript est ensembl bioinformatics algorithm by sebastien_vigneau on 2008-07-23 21:58:58 as *** along with 1 person Cortel
  • Nitrite reductase activity of myoglobin regulates respiration and cellular viability in myocardial ischemia-reperfusion injury
    Proceedings of the National Academy of Sciences, Vol. 105, No. 29. (2008), pp. 10256-10261.
    by Ulrike, Marc W Merx, Sruti Shiva, Joel Schmitz, Stefanie Becher, Johann P Klare, Heinz J Steinhoff, Axel Goedecke, Jürgen Schrader, Mark T Gladwin, Malte Kelm, Tienush Rassaf
    posted to nitric_oxide by sobolevnrm on 2008-07-23 20:07:40 as read
  • The Fisher-Bingham Distribution on the Sphere
    Journal of the Royal Statistical Society. Series B (Methodological), Vol. 44, No. 1. (1982), pp. 71-80.
    by John T Kent
    posted to statistics mathematics by sobolevnrm on 2008-07-23 17:33:48 as read
  • Cholesterol Packing around Lipids with Saturated and Unsaturated Chains: A Simulation Study
    Langmuir (3 June 2008)
    by Sagar A Pandit, See-Wing Chiu, Eric Jakobsson, Ananth Grama, HL Scott
    posted to oxysterols ligand-membrane_interactions biomembranes by sobolevnrm on 2008-07-23 12:15:32 as read along with 1 person and 1 group paulschlesinger baker-group
  • Computational Insights on the Competing Effects of Nitric Oxide in Regulating Apoptosis
    PLoS ONE, Vol. 3, No. 5. (28 May 2008), e2249.
    by Elife Z Bagci, Yoram Vodovotz, Timothy R Billiar, Bard Ermentrout, Ivet Bahar
    posted to systems_biology nitric_oxide by sobolevnrm on 2008-07-23 12:11:10 as read along with 1 group baker-group
  • Harmonic averaging of smooth permittivity functions in finite-difference PoissonBoltzmann Electrostatics
    Theoretical Chemistry Accounts, Vol. 119, No. 5-6. (April 2008), pp. 421-427.
    by Kottmann, Stephen
    posted to electrostatics by sobolevnrm on 2008-07-23 12:06:56 as read along with 1 group baker-group
  • Free-energy analysis of the molecular binding into lipid membrane with the method of energy representation
    The Journal of Chemical Physics, Vol. 128, No. 19. (2008), 195107.
    by Nobuyuki Matubayasi, Wataru Shinoda, Masaru Nakahara
    posted to statistical_mechanics solvation ligand-membrane_interactions biomembranes by sobolevnrm on 2008-07-23 11:59:00 as read along with 2 people and 1 group agrossfield paulschlesinger baker-group
  • Regulated Protein Denitrosylation by Cytosolic and Mitochondrial Thioredoxins
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1050-1054.
    by Moran Benhar, Michael T Forrester, Douglas T Hess, Jonathan S Stamler
    posted to nitric_oxide by sobolevnrm on 2008-07-23 11:55:34 as read along with 1 group baker-group
  • BIOCHEMISTRY: SNO Removal
    Science, Vol. 320, No. 5879. (23 May 2008), pp. 1019-1020.
    by Arne Holmgren
    posted to nitric_oxide by sobolevnrm on 2008-07-23 11:55:02 as read along with 1 group baker-group
  • Fluorescence Imaging of Membrane Dynamics
    Annual Review of Biomedical Engineering, Vol. 10, No. 1. (2008), pp. 311-338.
    by Jay T Groves, Raghuveer Parthasarathy, Martin B Forstner
    posted to biomembranes by sobolevnrm on 2008-07-23 11:45:48 as read along with 1 person and 1 group zwang baker-group
  • Effect of active smoking on the human bronchial epithelium transcriptome
    BMC Genomics, Vol. 8 (29 August 2007), 297.
    by Raj Chari, Kim M Lonergan, Raymond T Ng, Calum Macaulay, Wan L Lam, Stephen Lam
    posted to sage expression cancer biotechnology bioinformatics by operon on 2008-07-22 14:39:35 as **
  • Ontology-based knowledge representation for bioinformatics
    Brief Bioinform, Vol. 1, No. 4. (1 January 2000), pp. 398-414.
    by Robert Stevens, Carole A Goble, Sean Bechhofer
    posted to ontology bioinformatics by sobolevnrm on 2008-07-22 12:45:21 as read along with 4 people and 2 groups alanrw irenas PunkRock gmonce baker-group dbk-lab
  • Where are the semantics in the semantic web?
    AI Mag., Vol. 24, No. 3. (September 2003), pp. 25-36.
    by Michael Uschold
    posted to ontology bioinformatics by sobolevnrm on 2008-07-22 12:40:41 as read along with 8 people and 4 groups freecia wcrosbie dullhunk hpiwowar wasp mzygmunt RafG SeminarIW baker-group Semantic-Social-Networks Wikipedia CoP_CMS
  • Dimensions of knowledge sharing and reuse
    Computers and Biomedical Research, Vol. 25, No. 5. (October 1992), pp. 435-467.
    by Mark A Musen
    posted to software ontology bioinformatics by sobolevnrm on 2008-07-22 12:39:45 as read along with 1 group baker-group
  • Overview and utilization of the NCI Thesaurus
    Comparative and Functional Genomics, Vol. 5, No. 8. (December 2004), pp. 648-654.
    by Fragoso Gilberto, De C Sherri, Haber Margaret, Hartel Frank, Wright Larry
    posted to ontology bioinformatics by sobolevnrm on 2008-07-22 12:22:49 as read along with 1 group baker-group
  • Statistical mechanics of polar fluids in electric fields
    The Journal of Chemical Physics, Vol. 72, No. 3. (1980), pp. 1597-1613.
    by Ho JS Ye, G Stell
    posted to statistical_mechanics solvation electrostatics by sobolevnrm on 2008-07-22 12:00:42 as read along with 1 group baker-group
  • Mastering Your Ph.D.: A Career in Management Consulting
    Science Careers (2008)
    posted to misc career by sobolevnrm on 2008-07-22 11:51:37 as read along with 1 group baker-group
  • Very fast prediction and rationalization of p<I>K</I><SUB><FONT SIZE='-1'>a</FONT></SUB> values for protein-ligand complexes
    Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2008), NA.
    by Delphine C Bas, David M Rogers, Jan H Jensen
    posted to solvation software pka electrostatics bioinformatics by sobolevnrm on 2008-07-22 11:48:46 as read along with 1 group baker-group
  • Hydrodynamic modeling of diffusion tensor properties of flexible molecules
    Journal of Computational Chemistry, Vol. 9999, No. 9999. (2008), NA.
    by Vincenzo Barone, Mirco Zerbetto, Antonino Polimeno
    posted to solvation diffusion by sobolevnrm on 2008-07-22 11:43:12 as read along with 1 group baker-group
  • Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
    BMC Bioinformatics, Vol. 7 (25 October 2006), 474.
    by Oleksiy Kohany, Andrew J Gentles, Lukasz Hankus, Jerzy Jurka
    posted to repeats bioinformatics by timflutre on 2008-07-22 08:48:36 as ** along with 2 people niallhaslam yoanjacquemin
  • The Ascent of the Abundant: How Mutational Networks Constrain Evolution
    PLoS Comput Biol, Vol. 4, No. 7. (18 July 2008), e1000110.
    by Matthew C Cowperthwaite, Evan P Economo, William R Harcombe, Eric L Miller, Lauren A Meyers
    posted to rna network mutation modeling evolution by zwang on 2008-07-22 06:59:06 as ** along with 3 people friendpine djkt Ema
  • Test of the Gouy-Chapman Theory for a Charged Lipid Membrane against Explicit-Solvent Molecular Dynamics Simulations
    Physical Review Letters, Vol. 101, No. 3. (2008)
    by Myunggi Yi, Hugh Nymeyer, Huan X Zhou
    posted to solvation electrostatics biomembranes by sobolevnrm on 2008-07-21 21:02:32 as read along with 1 group baker-group
  • Ion Specific Protein Assembly and Hydrophobic Surface Forces
    Physical Review Letters, Vol. 100, No. 25. (2008)
    by Mikael Lund, Pavel Jungwirth, Clifford E Woodward
    posted to solvation protein-protein_interactions nonpolar by sobolevnrm on 2008-07-21 21:01:25 as read along with 1 person and 1 group mikaellund baker-group
  • Robustly Estimating the Flow Direction of Information in Complex Physical Systems
    Physical Review Letters, Vol. 100, No. 23. (2008)
    by Guido Nolte, Andreas Ziehe, Vadim V Nikulin, Alois Schlögl, Nicole Krämer, Tom Brismar, Klaus R Müller
    posted to statistics mathematics by sobolevnrm on 2008-07-21 21:00:20 as read along with 5 people and 1 group josepe tjpp hywel beete briordan baker-group
  • Cryptochrome mediates light-dependent magnetosensitivity in Drosophila
    Nature (20 July 2008)
    by Robert J Gegear, Amy Casselman, Scott Waddell, Steven M Reppert
  • Significant contribution of Archaea to extant biomass in marine subsurface sediments
    Nature (20 July 2008)
    by Julius S Lipp, Yuki Morono, Fumio Inagaki, Kai-Uwe Hinrichs
  • Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes
    Nature (20 July 2008)
    by Dacheng Tian, Qiang Wang, Pengfei Zhang, Hitoshi Araki, Sihai Yang, Martin Kreitman, Thomas Nagylaki, Richard Hudson, Joy Bergelson, Jian-Qun Chen
    posted by 2 people gjuggler bpcusack
  • Multipotent somatic stem cells contribute to the stem cell niche in the Drosophila testis
    Nature (20 July 2008)
    by Justin Voog, Cecilia D’alterio, Leanne D Jones
  • Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins.
    PLoS ONE, Vol. 3, No. 2. (2008)
    by CD Warden, SH Kim, SV Yi
    posted to saccharomyces rna noncoding_rna by stajich on 2008-07-21 05:56:32 as ** along with 1 group Berkeley Mycology
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