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miguel library [149 articles]

Статьи, недавно добавленные в библиотеку miguel .
  • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
    Nucleic Acids Res, Vol. 22, No. 22. (11 November 1994), pp. 4673-4680.
    by JD Thompson, DG Higgins, TJ Gibson
  • The UCSC genome browser database: update 2007.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by RM Kuhn, D Karolchik, AS Zweig, H Trumbower, DJ Thomas, A Thakkapallayil, CW Sugnet, M Stanke, KE Smith, A Siepel, KR Rosenbloom, B Rhead, BJ Raney, A Pohl, JS Pedersen, F Hsu, AS Hinrichs, RA Harte, M Diekhans, H Clawson, G Bejerano, GP Barber, R Baertsch, D Haussler, WJ Kent
    posted to browser genome ucsc by miguel on 2007-06-11 04:07:58 as ** along with 2 people balajis olympos
  • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders.
    Nucleic Acids Res, Vol. 33 Database Issue (1 January 2005)
    by A Hamosh, AF Scott, JS Amberger, CA Bocchini, VA McKusick
    posted to omim by miguel on 2007-06-11 04:06:25 as ** along with 5 people raiyar jyuh devakiram chad_davis Nilza
  • Global identification of human transcribed sequences with genome tiling arrays.
    Science, Vol. 306, No. 5705. (24 December 2004), pp. 2242-2246.
    by P Bertone, V Stolc, TE Royce, JS Rozowsky, AE Urban, X Zhu, JL Rinn, W Tongprasit, M Samanta, S Weissman, M Gerstein, M Snyder
  • Genome-Wide Location and Function of DNA Binding Proteins
    Science, Vol. 290, No. 5500. (22 December 2000), pp. 2306-2309.
    by Bing Ren, Francois Robert, John J Wyrick, Oscar Aparicio, Ezra G Jennings, Itamar Simon, Julia Zeitlinger, Jorg Schreiber, Nancy Hannett, Elenita Kanin, Thomas L Volkert, Christopher J Wilson, Stephen P Bell, Richard A Young
  • Tilling the chromatin landscape: emerging methods for the discovery and profiling of protein-DNA interactions.
    Biochem Cell Biol, Vol. 83, No. 4. (August 2005), pp. 525-534.
    by BA Rodriguez, TH Huang
    posted to histone chip by miguel on 2007-02-07 20:15:52 as read along with 1 person jyuh
  • Mapping protein-DNA interactions in vivo with formaldehyde: evidence that histone H4 is retained on a highly transcribed gene.
    Cell, Vol. 53, No. 6. (17 June 1988), pp. 937-947.
    posted to histone h4 chip by miguel on 2007-02-07 20:10:06 as **
  • A supervised hidden Markov model framework for efficiently segmenting tiling array data in transcriptional and ChIP-chip experiments: systematically incorporating validated biological knowledge.
    Bioinformatics (12 October 2006)
    by Jiang Du, Joel S S Rozowsky, Jan O O Korbel, Zhengdong D D Zhang, Thomas E E Royce, Martin H H Schultz, Michael Snyder, Mark Gerstein
  • Cluster analysis and display of genome-wide expression patterns.
    Proc Natl Acad Sci U S A, Vol. 95, No. 25. (8 December 1998), pp. 14863-14868.
    by MB Eisen, PT Spellman, PO Brown, D Botstein
  • Stem cells. 'Stemness' genes still elusive.
    Science, Vol. 302, No. 5644. (17 October 2003)
    by G Vogel
    posted to cells microarrays stem by miguel on 2006-08-21 20:08:50 as read
  • "Stemness": transcriptional profiling of embryonic and adult stem cells.
    Science, Vol. 298, No. 5593. (18 October 2002), pp. 597-600.
    posted to analysis cells stem by miguel on 2006-06-28 16:49:47 as read along with 2 people tuck hplatero
  • A stem cell molecular signature.
    Science, Vol. 298, No. 5593. (18 October 2002), pp. 601-604.
    by NB Ivanova, JT Dimos, C Schaniel, JA Hackney, KA Moore, IR Lemischka
    posted to analysis cells stem by miguel on 2006-06-28 16:48:41 as read along with 1 person hplatero
  • The transcriptional landscape of the mammalian genome.
    Science, Vol. 309, No. 5740. (2 September 2005), pp. 1559-1563.
    by P Carninci, T Kasukawa, S Katayama, J Gough, MC Frith, N Maeda, R Oyama, T Ravasi, B Lenhard, C Wells, R Kodzius, K Shimokawa, VB Bajic, SE Brenner, S Batalov, AR Forrest, M Zavolan, MJ Davis, LG Wilming, V Aidinis, JE Allen, A Ambesi-Impiombato, R Apweiler, RN Aturaliya, TL Bailey, M Bansal, L Baxter, KW Beisel, T Bersano, H Bono, AM Chalk, KP Chiu, V Choudhary, A Christoffels, DR Clutterbuck, ML Crowe, E Dalla, BP Dalrymple, B de Bono, G Della Gatta, D di Bernardo, T Down, P Engstrom, M Fagiolini, G Faulkner, CF Fletcher, T Fukushima, M Furuno, S Futaki, M Gariboldi, P Georgii-Hemming, TR Gingeras, T Gojobori, RE Green, S Gustincich, M Harbers, Y Hayashi, TK Hensch, N Hirokawa, D Hill, L Huminiecki, M Iacono, K Ikeo, A Iwama, T Ishikawa, M Jakt, A Kanapin, M Katoh, Y Kawasawa, J Kelso, H Kitamura, H Kitano, G Kollias, SP Krishnan, A Kruger, SK Kummerfeld, IV Kurochkin, LF Lareau, D Lazarevic, L Lipovich, J Liu, S Liuni, S McWilliam, M Madan Babu, M Madera, L Marchionni, H Matsuda, S Matsuzawa, H Miki, F Mignone, S Miyake, K Morris, S Mottagui-Tabar, N Mulder, N Nakano, H Nakauchi, P Ng, R Nilsson, S Nishiguchi, S Nishikawa, F Nori, O Ohara, Y Okazaki, V Orlando, KC Pang, WJ Pavan, G Pavesi, G Pesole, N Petrovsky, S Piazza, J Reed, JF Reid, BZ Ring, M Ringwald, B Rost, Y Ruan, SL Salzberg, A Sandelin, C Schneider, C Schönbach, K Sekiguchi, CA Semple, S Seno, L Sessa, Y Sheng, Y Shibata, H Shimada, K Shimada, D Silva, B Sinclair, S Sperling, E Stupka, K Sugiura, R Sultana, Y Takenaka, K Taki, K Tammoja, SL Tan, S Tang, MS Taylor, J Tegner, SA Teichmann, HR Ueda, E van Nimwegen, R Verardo, CL Wei, K Yagi, H Yamanishi, E Zabarovsky, S Zhu, A Zimmer, W Hide, C Bult, SM Grimmond, RD Teasdale, ET Liu, V Brusic, J Quackenbush, C Wahlestedt, JS Mattick, DA Hume, C Kai, D Sasaki, Y Tomaru, S Fukuda, M Kanamori-Katayama, M Suzuki, J Aoki, T Arakawa, J Iida, K Imamura, M Itoh, T Kato, H Kawaji, N Kawagashira, T Kawashima, M Kojima, S Kondo, H Konno, K Nakano, N Ninomiya, T Nishio, M Okada, C Plessy, K Shibata, T Shiraki, S Suzuki, M Tagami, K Waki, A Watahiki, Y Okamura-Oho, H Suzuki, J Kawai, Y Hayashizaki, ,
  • Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4
    Nature, Vol. 441, No. 7090., pp. 173-178.
    by Mark Gilchrist, Vesteinn Thorsson, Bin Li, Alistair G Rust, Martin Korb, Kathleen Kennedy, Tsonwin Hai, Hamid Bolouri, Alan Aderem
    posted to biology systems by miguel on 2006-05-13 19:09:37 as read along with 2 people biozhang2001 tuck
  • Amplification of the Gene Ontology annotation of Affymetrix probe sets.
    BMC Bioinformatics, Vol. 7 (2006)
    posted to dna gene microarray ontology by miguel on 2006-04-19 03:44:00 as read
  • Stem cells: specifying stem-cell niches in the worm.
    Curr Biol, Vol. 16, No. 5. (7 March 2006)
    posted to cells stem worm by miguel on 2006-03-23 21:28:21 as read
  • Three-dimensional nanofibrillar surfaces promote self-renewal in mouse embryonic stem cells.
    Stem Cells, Vol. 24, No. 2. (February 2006), pp. 426-433.
    posted to matrix mesc by miguel on 2006-03-23 20:36:24 as *** along with 1 person faisalm
  • The multifunctional RNA-binding protein La is required for mouse development and for the establishment of embryonic stem cells.
    Mol Cell Biol, Vol. 26, No. 4. (February 2006), pp. 1445-1451.
    by JM Park, MJ Kohn, MW Bruinsma, C Vech, RV Intine, S Fuhrmann, A Grinberg, I Mukherjee, PE Love, MS Ko, ML DePamphilis, RJ Maraia
  • Genome-wide identification of genes likely to be involved in human genetic disease.
    Nucleic Acids Res, Vol. 32, No. 10. (2004), pp. 3108-3114.
  • Exploration, normalization, and summaries of high density oligonucleotide array probe level data.
    Biostatistics, Vol. 4, No. 2. (April 2003), pp. 249-264.
  • Migfilin and its binding partners: from cell biology to human diseases.
    J Cell Sci, Vol. 118, No. Pt 4. (15 February 2005), pp. 659-664.
    by C Wu
    posted to fblim1 migfilin by miguel on 2006-03-12 05:00:00 as **
  • Crystal structure of Arp2/3 complex.
    Science, Vol. 294, No. 5547. (23 November 2001), pp. 1679-1684.
    by RC Robinson, K Turbedsky, DA Kaiser, JB Marchand, HN Higgs, S Choe, TD Pollard
    posted to arpc5 by miguel on 2006-03-12 04:53:10 as **
  • Characterization and differential expression of human vascular smooth muscle myosin light chain 2 isoform in nonmuscle cells.
    Biochemistry, Vol. 28, No. 9. (2 May 1989), pp. 4027-4035.
    by CC Kumar, SR Mohan, PJ Zavodny, SK Narula, PJ Leibowitz
    posted to mlc2 myl9 by miguel on 2006-03-12 04:51:12 as **
  • AIP1/WDR1 supports mitotic cell rounding.
    Biochem Biophys Res Commun, Vol. 327, No. 1. (4 February 2005), pp. 268-275.
    by T Fujibuchi, Y Abe, T Takeuchi, Y Imai, Y Kamei, R Murase, N Ueda, K Shigemoto, H Yamamoto, K Kito
    posted to aip1 wdr1 by miguel on 2006-03-12 04:39:05 as **
  • Identification of the nucleocytoplasmic shuttling sequence of heterogeneous nuclear ribonucleoprotein D-like protein JKTBP and its interaction with mRNA.
    J Biol Chem, Vol. 277, No. 4. (25 January 2002), pp. 2732-2739.
    by H Kawamura, Y Tomozoe, T Akagi, D Kamei, M Ochiai, M Yamada
    posted to hnrpdl jktbp by miguel on 2006-03-12 03:12:24 as *
  • PCR display identifies tamoxifen induction of the novel angiogenic factor adrenomedullin by a non estrogenic mechanism in the human endometrium.
    Oncogene, Vol. 16, No. 3. (22 January 1998), pp. 409-415.
    by Y Zhao, S Hague, S Manek, L Zhang, R Bicknell, MC Rees
    posted to adm adrenomedullin by miguel on 2006-03-10 05:57:04 as **
  • CYR61 (CCN1) is essential for placental development and vascular integrity.
    Mol Cell Biol, Vol. 22, No. 24. (December 2002), pp. 8709-8720.
    by FE Mo, AG Muntean, CC Chen, DB Stolz, SC Watkins, LF Lau
    posted to ccn1 cyr61 by miguel on 2006-03-10 05:48:07 as **
  • Fibroblast growth factor signaling and basement membrane assembly are connected during epithelial morphogenesis of the embryoid body.
    J Cell Biol, Vol. 153, No. 4. (14 May 2001), pp. 811-822.
    posted to lam1 lama1 by miguel on 2006-03-10 05:25:07 as **
  • Cripto is required for correct orientation of the anterior-posterior axis in the mouse embryo.
    Nature, Vol. 395, No. 6703. (15 October 1998), pp. 702-707.
    by J Ding, L Yang, YT Yan, A Chen, N Desai, A Wynshaw-Boris, MM Shen
    posted to cripto tdgf1 by miguel on 2006-03-10 05:04:57 as **
  • Cripto enhances the tyrosine phosphorylation of Shc and activates mitogen-activated protein kinase (MAPK) in mammary epithelial cells.
    J Biol Chem, Vol. 272, No. 6. (7 February 1997), pp. 3330-3335.
    posted to cripto tdgf1 by miguel on 2006-03-10 04:53:11 as **
  • Pan1b (17betaHSD11)-enzymatic activity and distribution in the lung.
    Mol Cell Endocrinol, Vol. 171, No. 1-2. (22 January 2001), pp. 111-117.
    posted to dhrs8 pan1b by miguel on 2006-03-10 04:41:18 as **
  • Fbx15 is a novel target of Oct3/4 but is dispensable for embryonic stem cell self-renewal and mouse development.
    Mol Cell Biol, Vol. 23, No. 8. (April 2003), pp. 2699-2708.
    posted to fbxo15 by miguel on 2006-03-10 04:20:58 as ** along with 1 person ccr
  • The human homolog of Escherichia coli Orn degrades small single-stranded RNA and DNA oligomers.
    J Biol Chem, Vol. 275, No. 34. (25 August 2000), pp. 25900-25906.
    by LH Nguyen, JP Erzberger, J Root, DM Wilson
    posted to exonuclease rexo2 sfn smfn by miguel on 2006-03-10 04:12:08 as **
  • Role of the adaptor proteins Bam32, TAPP1 and TAPP2 in lymphocyte activation.
    Immunol Lett, Vol. 97, No. 1. (15 February 2005), pp. 7-17.
    by A Allam, AJ Marshall
    posted to plekha2 tapp2 by miguel on 2006-03-10 03:20:09 as **
  • Cloning and characterization of ERG25, the Saccharomyces cerevisiae gene encoding C-4 sterol methyl oxidase.
    Proc Natl Acad Sci U S A, Vol. 93, No. 1. (9 January 1996), pp. 186-190.
    by M Bard, DA Bruner, CA Pierson, ND Lees, B Biermann, L Frye, C Koegel, R Barbuch
    posted to erg25 sc4mol by miguel on 2006-03-09 21:31:08 as **
  • Differentiation-induced gene expression in 3T3-L1 preadipocytes. A second differentially expressed gene encoding stearoyl-CoA desaturase.
    J Biol Chem, Vol. 264, No. 25. (5 September 1989), pp. 14755-14761.
    by KH Kaestner, JM Ntambi, TJ Kelly, MD Lane
    posted to scd2 by miguel on 2006-03-09 21:23:59 as **
  • ERO1-L, a human protein that favors disulfide bond formation in the endoplasmic reticulum.
    J Biol Chem, Vol. 275, No. 7. (18 February 2000), pp. 4827-4833.
    by A Cabibbo, M Pagani, M Fabbri, M Rocchi, MR Farmery, NJ Bulleid, R Sitia
    posted to ero1l by miguel on 2006-03-09 20:40:22 as **
  • The annexins.
    Genome Biol, Vol. 5, No. 4. (2004)
    by SE Moss, RO Morgan
    posted to annexins domain by miguel on 2006-03-08 21:31:24 as ***
  • MicroRNAs: genomics, biogenesis, mechanism, and function.
    Cell, Vol. 116, No. 2. (23 January 2004), pp. 281-297.
    by DP Bartel
  • Alternative poly(A) site selection in complex transcription units: means to an end?
    Nucleic Acids Res, Vol. 25, No. 13. (1 July 1997), pp. 2547-2561.
    posted to polyadenylation by miguel on 2006-02-23 20:36:16 as ***** along with 2 people Cortel bertelsen
  • Alpha-thalassaemia caused by a polyadenylation signal mutation.
    Nature, Vol. 306, No. 5941. (0 1983), pp. 398-400.
    by DR Higgs, SE Goodbourn, J Lamb, JB Clegg, DJ Weatherall, NJ Proudfoot
    posted to pas snp by miguel on 2006-02-23 20:31:50 as **
  • The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes.
    Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005)
    posted to database est by miguel on 2006-02-22 16:40:40 as ** along with 2 people Schmidtc incovoma
  • Ensembl 2006.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
  • The UCSC Genome Browser Database: update 2006.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    posted to database est genome by miguel on 2006-02-21 15:18:47 as *** along with 2 people aalibes usagi-kirin
  • Microarray analysis of LIF/Stat3 transcriptional targets in embryonic stem cells.
    Stem Cells, Vol. 23, No. 10. (c 2005), pp. 1634-1642.
  • The SWISS-MODEL Repository: new features and functionalities.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by J Kopp, T Schwede
  • FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties.
    J Mol Biol, Vol. 310, No. 1. (29 June 2001), pp. 243-257.
    by J Shi, TL Blundell, K Mizuguchi
  • Scoredist: a simple and robust protein sequence distance estimator.
    BMC Bioinformatics, Vol. 6, No. 1. (2005)
    posted to alignment belvu program protein sequence by miguel on 2006-02-12 23:07:42 as **
  • T-Coffee: A novel method for fast and accurate multiple sequence alignment.
    J Mol Biol, Vol. 302, No. 1. (8 September 2000), pp. 205-217.
  • The Universal Protein Resource (UniProt): an expanding universe of protein information.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
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