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mmuecke high-performance_computing [42 articles]

Recent papers added to mmuecke library classified by the tag high-performance_computing. You can also see everyone's high-performance_computing.
  • Anatomy of high-performance matrix multiplication
    ACM Trans. Math. Softw., Vol. 34, No. 3. (May 2008), pp. 1-25.
    by Kazushige Goto, Robert A van de Geijn
    posted to sparse_matrix high-performance_computing by mmuecke on 2008-07-02 14:50:18 as **
  • The Cray BlackWidow: a highly scalable vector multiprocessor
    (2007), pp. 1-12.
    by Dennis Abts, Abdulla Bataineh, Steve Scott, Greg Faanes, Jim Schwarzmeier, Eric Lundberg, Tim Johnson, Mike Bye, Gerald Schwoerer
    posted to high-performance_computing computer_architecture by mmuecke on 2008-06-10 10:35:48 as ** along with 1 person jborn
  • GRAPE-DR: 2-Pflops massively-parallel computer with 512-core, 512-Gflops processor chips for scientific computing
    (2007), pp. 1-11.
    by Junichiro Makino, Kei Hiraki, Mary Inaba
    posted to molecular_dynamics high-performance_computing computer_architecture by mmuecke on 2008-06-10 10:33:12 as **
  • Using FPGA Devices to Accelerate Biomolecular Simulations
    Computer, Vol. 40, No. 3. (2007), pp. 66-73.
    by Sadaf R Alam, Pratul K Agarwal, Melissa C Smith, Jeffrey S Vetter, David Caliga
    posted to molecular_dynamics high-performance_computing fpgasupercomputing by mmuecke on 2008-05-27 10:39:39 as ** along with 4 people adilson_mohr hamish peskin smithmc
  • Scientific Computing Kernels on the Cell Processor
    International Journal of Parallel Programming, Vol. 35, No. 3. (June 2007), pp. 263-298.
    by Samuel Williams, John Shalf, Leonid Oliker, Shoaib Kamil, Parry Husbands, Katherine Yelick
    posted to high-performance_computing floating_point cell_cpu by mmuecke on 2008-05-26 16:11:19 as ** along with 1 person and 1 group sharshera SCAL
  • Accelerating Scientific Applications with Reconfigurable Computing: Getting Started
    Computing in Science & Engineering, Vol. 9, No. 5. (2007), pp. 70-77.
    by VV Kindratenko, CP Steffen, RJ Brunner
    posted to reconfigurable_computing high-performance_computing by mmuecke on 2008-05-26 13:14:58 as **
  • Sparse Matrix Computations on Reconfigurable Hardware
    Computer, Vol. 40, No. 3. (2007), pp. 58-64.
    by Viktor K Prasanna, Gerald R Morris
    posted to sparse_matrix reconfigurable_computing high-performance_computing high_level_synthesis floating_point by mmuecke on 2008-05-26 13:09:30 as ** along with 4 people hamish peskin smithmc esak
  • Accelerating Molecular Dynamics Simulations with Reconfigurable Computers
    Parallel and Distributed Systems, IEEE Transactions on, Vol. 19, No. 6. (2008), pp. 764-778.
    by Ronald Scrofano, Maya B Gokhale, Frans Trouw, Viktor K Prasanna
    posted to reconfigurable_computing molecular_dynamics high-performance_computing fpgasupercomputing by mmuecke on 2008-05-08 13:57:15 as ** along with 1 person adilson_mohr
  • The ASC-Alliance Projects: A Case Study of Large-Scale Parallel Scientific Code Development
    Computer, Vol. 41, No. 3. (2008), pp. 50-58.
    by Lorin Hochstein, Victor R Basili
    posted to case_study high-performance_computing parallel_programming by mmuecke on 2008-04-08 13:01:49 as ** along with 1 person RhysU
  • notes Exploring Unexpected Behavior in MPI
    High Performance Computing and Communications (2006), pp. 843-852.
    by Martin Schulz, Dieter Kranzlmüller, Bronis de Supinski
    posted to architecture_comparison communication_algorithms high-performance_computing mpi mpi_tools performance_analysis by mmuecke on 2008-03-27 12:43:36 as **
  • Probing the Applicability of Polarizable Force-Field Molecular Dynamics for Parallel Architectures: A Comparison of Digital MPI with LAM-MPI and MPICH2
    Recent Advances in Parallel Virtual Machine and Message Passing Interface (2005), pp. 433-440.
    by Benjamin Almeida, Reema Mahajan, Dieter Kranzlmüller, Jens Volkert, Siegfried Höfinger
    posted to case_study high-performance_computing molecular_dynamics mpi parallel_algorithms performance_analysis by mmuecke on 2008-03-14 08:14:18 as **
  • GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
    J. Chem. Theory Comput. (2 February 2008)
    by B Hess, C Kutzner, D Vanderspoel, E Lindahl
    posted to high-performance_computing molecular_dynamics parallel_algorithms by mmuecke on 2008-02-20 16:18:30 as read along with 6 people and 1 group loison daevans sobolevnrm r2s2 middledomain OndrejMarsalek baker-group
  • Single-Threaded vs. Multithreaded: Where Should We Focus?
    Micro, IEEE, Vol. 27, No. 6. (2007), pp. 14-24.
    by Joel Emer, Mark D Hill, Yale N Patt, Joshua J Yi, Derek Chiou, Resit Sendag
    posted to computer_architecture high-performance_computing parallel_programming trends by mmuecke on 2008-02-13 12:28:17 as **
  • Improving the execution time of global communication operations
    (2004), pp. 276-287.
    by Matthias Kühnemann, Thomas Rauber, Gudula Rünger
    posted to high-performance_computing mpi by mmuecke on 2008-01-27 16:04:11 as **
  • Special Issue High Performance Parallel Functional Programming
    J. Funct. Program., Vol. 15, No. 3. (May 2005), pp. 351-352.
    by PW Trinder
    posted to functional high-performance_computing parallel_programming by mmuecke on 2008-01-27 15:56:37 as *****
  • SAC: a functional array language for efficient multi-threaded execution
    Int. J. Parallel Program., Vol. 34, No. 4. (August 2006), pp. 383-427.
    by Clemens Grelck, Sven-Bodo Scholz
    posted to functional high-performance_computing language_design parallel_programming by mmuecke on 2008-01-24 11:27:21 as *****
  • Grid computing and biomolecular simulation
    Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 363, No. 1833. (2005), pp. 2017-2035.
    by Christopher J Woods, Muan H Ng, Steven Johnston, Stuart E Murdock, Bing Wu, Kaihsu Tai, Hans Fangohr, Paul Jeffreys, Simon Cox, Jeremy G Frey, Mark S Sansom, Jonathan W Essex
    posted to bioinformatics high-performance_computing molecular_docking molecular_dynamics by mmuecke on 2008-01-21 12:27:45 as read
  • On the performance of molecular dynamics applications on current high-end systems.
    Philos Transact A Math Phys Eng Sci, Vol. 363, No. 1833. (15 August 2005), pp. 1987-1998.
    by J Hein, F Reid, L Smith, I Bush, M Guest, P Sherwood
    posted to charmm high-performance_computing molecular_dynamics survey by mmuecke on 2008-01-21 12:24:25 as read along with 1 person hlwoodcock
  • notes Chapel, Fortress and X10: Novel Languages for HPC
    (October 2007)
    by Michèle Weiland
    posted to compiler_design dsl high-performance_computing language_design parallel_programming by mmuecke on 2008-01-21 10:19:40 as read along with 1 person iriX
  • The rise and fall of High Performance Fortran: an historical object lesson
    (2007)
    by Ken Kennedy, Charles Koelbel, Hans Zima
    posted to high-performance_computing language_design parallel_programming by mmuecke on 2008-01-17 12:14:50 as **
  • Application Development on Hybrid Systems
    Proceedings of Supercomputin 07
    by Roger D Chamberlain, Eric J Tyson, Saurabh Gayen, Mark A Franklin, Jeremy Buhler, Patrick Crowley, James H Buckley
    posted to computer_architecture dfg fpga fpgasupercomputing high-performance_computing reconfigurable_computing by mmuecke on 2007-12-19 15:51:51 as ** along with 1 person iriX
  • Parallelizing Molecular Dynamics Programs for Distributed-Memory Machines
    IEEE Comput. Sci. Eng., Vol. 2, No. 2. (June 1995), pp. 18-29.
    by Yuan-Shin Hwang, Raja Das, Joel H Saltz, Milan Hodoscek, Bernard R Brooks
    posted to charmm high-performance_computing by mmuecke on 2007-12-11 10:11:54 as ****
  • Exchanging messages of different sizes
    J. Parallel Distrib. Comput., Vol. 66, No. 1. (January 2006), pp. 1-18.
    by Alfredo Goldman, Joseph G Peters, Denis Trystram
    posted to communication_algorithms high-performance_computing mpi by mmuecke on 2007-12-11 10:09:05 as ****
  • Runtime Optimization of Application Level Communication Patterns
    Parallel and Distributed Processing Symposium, 2007. IPDPS 2007. IEEE International (2007), pp. 1-8.
    by E Gabriel, S Huang
    posted to communication_algorithms high-performance_computing mpi by mmuecke on 2007-12-11 08:37:34 as read
  • Optimization of MPI collective communication on BlueGene/L systems
    (2005), pp. 253-262.
    by George Almási, Philip Heidelberger, Charles J Archer, Xavier Martorell, Chris C Erway, José E Moreira, B Steinmacher-Burow, Yili Zheng
    posted to communication_algorithms high-performance_computing mpi parallel_programming by mmuecke on 2007-12-10 21:02:55 as **
  • Microarchitecture-Independent Workload Characterization
    Micro, IEEE, Vol. 27, No. 3. (2007), pp. 63-72.
    by Kenneth Hoste, Lieven Eeckhout
    posted to computer_architecture high-performance_computing by mmuecke on 2007-11-21 22:35:08 as **
  • Guest Editors' Introduction: On-Chip Interconnects for Multicores
    IEEE Micro, Vol. 27, No. 5. (2007), pp. 3-5.
    by Partha Kundu, Li-Shiuan Peh
    posted to computer_architecture high-performance_computing by mmuecke on 2007-11-19 13:47:37 as read
  • Accelerators For High Performance Computing Investigation
    (January 2007)
    by Jim Bovay, Brent Henderson, Hsin-Ying Lin, Kevin Wadleigh
    posted to architecture_comparison fpgasupercomputing high-performance_computing reconfigurable_computing trends by mmuecke on 2007-11-06 12:41:40 as read
  • A survey of parallel program performance evaluation techniques using visualization and virtual reality
    Aerospace Conference Proceedings, 2000 IEEE, Vol. 4 (2000), pp. 457-464 vol.4.
    by KL Summers, J Greenfield, BT Smith
    posted to high-performance_computing mpi mpi_tools parallel_programming survey by mmuecke on 2007-10-31 08:52:01 as ** along with 1 person and 1 group rblake uiuc-cs
  • Adventures in Improving the Scaling and Accuracy of a Parallel Molecular Dynamics Program
    J. Supercomput., Vol. 11, No. 3. (1997), pp. 255-278.
    by Michael Crowley, Tom Darden, Thomas Cheatham, David Deerfield
    posted to fft high-performance_computing molecular_dynamics by mmuecke on 2007-10-10 12:55:41 as read
  • notes SPIRAL: code generation for DSP transforms
    Proceedings of the IEEE, Vol. 93, No. 2. (2005), pp. 232-275.
    by M Puschel, JMF Moura, JR Johnson, D Padua, MM Veloso, BW Singer, Jianxin Xiong, F Franchetti, A Gacic, Y Voronenko, K Chen, RW Johnson, N Rizzolo
    posted to dsl high-performance_computing by mmuecke on 2007-07-24 13:17:21 as **
  • Applying Code Specialization to FFT Libraries for Integral Parameters
    Languages and Compilers for Parallel Computing (2007), pp. 96-110.
    by Minhaj Khan, Henri-Pierre Charles
    posted to fft high-performance_computing parallel_programming by mmuecke on 2007-07-16 09:26:22 as **
  • FFT Compiler Techniques
    Compiler Construction (2004), pp. 217-231.
    by Stefan Kral, Franz Franchetti, Juergen Lorenz, Christoph W Ueberhuber, Peter Wurzinger
    posted to fft high-performance_computing parallel_programming by mmuecke on 2007-07-16 09:25:05 as **
  • HiLO: High Level Optimization of FFTs
    Languages and Compilers for High Performance Computing (2005), pp. 238-252.
    by Nick Rizzolo, David Padua
    posted to fft high-performance_computing parallel_programming by mmuecke on 2007-07-16 09:19:08 as **
  • The design and implementation of FFTW3
    Proceedings of the IEEE, Vol. 93, No. 2. (2005), pp. 216-231.
    by M Frigo, SG Johnson
    posted to compiler_design fft high-performance_computing parallel_algorithms by mmuecke on 2007-07-10 16:18:45 as **
  • notes Fast linear Hough transform
    Application Specific Array Processors, 1994. Proceedings., International Conference on (1994), pp. 1-9.
    by JE Vuillemin
    posted to fpgas_in_hep high-performance_computing by mmuecke on 2007-07-10 12:54:34 as read
  • notes In search of a program generator to implement generic transformations for high-performance computing
    Sci. Comput. Program., Vol. 62, No. 1. (September 2006), pp. 25-46.
    by Albert Cohen, S&\#233;bastien Donadio, Maria-Jesus Garzaran, Christoph Herrmann, Oleg Kiselyov, David Padua
    posted to dsl high-performance_computing trends by mmuecke on 2007-06-04 17:56:09 as ** along with 1 person iff
  • LAMP: a tool suite for families of FPGA-based computational accelerators
    Field Programmable Logic and Applications, 2005. International Conference on (2005), pp. 612-617.
    by T Van Court, MC Herbordt
    posted to dsl fpga hdl high-performance_computing by mmuecke on 2007-03-08 12:04:35 as ** along with 1 person smithmc
  • notes The LHCb DAQ interface board TELL1
    Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Vol. 560, No. 2. (10 May 2006), pp. 494-502.
    by G Haefeli, A Bay, A Gong, H Gong, M Muecke, N Neufeld, O Schneider
    posted to fpga high-performance_computing lhcb vhdl by mmuecke on 2007-02-22 17:16:31 as read
  • Protein Explorer: A Petaflops Special-Purpose Computer System for Molecular Dynamics Simulations
    (2003)
    by Makoto Taiji, Tetsu Narumi, Yousuke Ohno, Noriyuki Futatsugi, Atsushi Suenaga, Naoki Takada, Akihiko Konagaya
    posted to bioinformatics high-performance_computing by mmuecke on 2006-11-28 13:00:33 as ****
  • What's next in high-performance computing?
    Commun. ACM, Vol. 45, No. 2. (February 2002), pp. 91-95.
    by Gordon Bell, Jim Gray
    posted to high-performance_computing by mmuecke on 2006-11-28 12:52:26 as ****
  • Exploiting Workload Parallelism for Performance and Power Optimization in Blue Gene
    Micro, IEEE, Vol. 26, No. 5. (2006), pp. 67-81.
    by V Salapura, R Walkup, A Gara
    posted to high-performance_computing by mmuecke on 2006-10-25 10:21:01 as read
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