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natstreet no-tag [449 articles]

Recent papers added to natstreet library classified by the tag no-tag. You can also see everyone's no-tag.
  • Shadow Enhancers as a Source of Evolutionary Novelty
    Science, Vol. 321, No. 5894. (5 September 2008), 1314.
    by Joung-Woo Hong, David A Hendrix, Michael S Levine
    posted to no-tag by natstreet on 2008-09-05 14:46:14 as ** along with 4 people and 1 group djkt isimpson maximilianh caseybrown Jarman Lab
  • Human-Specific Gain of Function in a Developmental Enhancer
    Science, Vol. 321, No. 5894. (5 September 2008), pp. 1346-1350.
    by Shyam Prabhakar, Axel Visel, Jennifer A Akiyama, Malak Shoukry, Keith D Lewis, Amy Holt, Ingrid Plajzer-Frick, Harris Morrison, David R Fitzpatrick, Veena Afzal, Len A Pennacchio, Edward M Rubin, James P Noonan
    posted to no-tag by natstreet on 2008-09-05 14:44:23 as ** along with 5 people djkt isimpson maximilianh caseybrown eskay
  • Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes.
    Nature genetics, Vol. 30, No. 2. (February 2002), pp. 194-200.
    by M Morgante, M Hanafey, W Powell
    posted to no-tag by natstreet on 2008-09-05 08:57:34 as **
  • Short fuzzy tandem repeats in genomic sequences, identification, and possible role in regulation of gene expression
    Bioinformatics, Vol. 22, No. 6. (15 March 2006), pp. 676-684.
    by Valentina Boeva, Mireille Regnier, Dmitri Papatsenko, Vsevolod Makeev
    posted to no-tag by natstreet on 2008-09-05 08:57:06 as **
  • SciRoKo: a new tool for whole genome microsatellite search and investigation
    Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. 1683-1685.
    by Robert Kofler, Christian Schlotterer, Tamas Lelley
    posted to no-tag by natstreet on 2008-09-05 08:56:36 as ** along with 1 person druvus
  • Detecting short tandem repeats from genome data: opening the software black box.
    Briefings in bioinformatics (10 July 2008)
    by Angelika Merkel, Neil Gemmell
    posted to no-tag by natstreet on 2008-09-05 08:56:10 as ** along with 2 people druvus nuin
  • TROLL--Tandem Repeat Occurrence Locator
    Bioinformatics, Vol. 18, No. 4. (1 April 2002), pp. 634-636.
    by Adalberto T Castelo, Wellington Martins, Guang R Gao
    posted to no-tag by natstreet on 2008-09-05 08:54:42 as ** along with 1 person druvus
  • Vein patterning screens and the <i>defectively organized tributaries</i> mutants in <i>Arabidopsis thaliana</i>
    The Plant Journal, Vol. 9999, No. 9999. (2008)
    by Jalean J Petricka, Nicole K Clay, Timothy M Nelson
    posted to no-tag by natstreet on 2008-09-05 08:41:16 as **
  • Characterization of Arabidopsis <i>mur3</i> mutations that result in constitutive activation of defence in petioles, but not leaves
    The Plant Journal, Vol. 9999, No. 9999. (2008)
    by Jennifer D Tedman-Jones, Rita Lei, Florence Jay, Georgina Fabro, Xuemei Li, Wolf-Dieter Reiter, Charles Brearley, Jonathan DG Jones
    posted to no-tag by natstreet on 2008-09-05 08:39:35 as **
  • <i>PROCERA</i> encodes a DELLA protein that mediates control of dissected leaf form in tomato
    The Plant Journal, Vol. 9999, No. 9999. (2008)
    by Sophie Jasinski, Alex Tattersall, Paolo Piazza, Angela Hay, Jaime F Martinez-Garcia, Gregor Schmitz, Klaus Theres, Sheila Mccormick, Miltos Tsiantis
    posted to no-tag by natstreet on 2008-09-05 08:37:40 as **
  • Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5
    The Plant Journal, Vol. 9999, No. 9999. (2008)
    by Moussa Benhamed, Marie-Laure Martin-Magniette, Ludivine Taconnat, Frédérique Bitton, Caroline Servet, Rebecca De Clercq, Björn De Meyer, Caroline Buysschaert, Stéphane Rombauts, Raimundo Villarroel, Sébastien Aubourg, Jim Beynon, Rishikesh P Bhalerao, George Coupland, Wilhelm Gruissem, Frank LH Menke, Bernd Weisshaar, Jean-Pierre Renou, Dao-Xiu Zhou, Pierre Hilson
    posted to no-tag by natstreet on 2008-09-05 08:35:51 as **
  • Identification of Arabidopsis thaliana phloem RNAs provides a search criterion for phloem-based transcripts hidden in complex datasets of microarray experiments.
    The Plant journal : for cell and molecular biology (14 May 2008)
    by Rosalia Deeken, Peter Ache, Inga Kajahn, Joern Klinkenberg, Gerhard Bringmann, Rainer Hedrich
    posted to no-tag by natstreet on 2008-09-05 08:34:58 as **
  • Haplotype divergence in <i>Beta vulgaris</i> and microsynteny with sequenced plant genomes
    The Plant Journal, Vol. 9999, No. 999A. (2008)
    by Juliane C Dohm, Cornelia Lange, Richard Reinhardt, Heinz Himmelbauer
    posted to no-tag by natstreet on 2008-09-05 08:01:46 as **
  • Repeat polymorphisms within gene regions: phenotypic and evolutionary implications.
    American journal of human genetics, Vol. 67, No. 2. (August 2000), pp. 345-356.
    by JD Wren, E Forgacs, JW Fondon, A Pertsemlidis, SY Cheng, T Gallardo, RS Williams, RV Shohet, JD Minna, HR Garner
    posted to no-tag by natstreet on 2008-09-05 08:01:22 as ** along with 1 person druvus
  • Linking metabolic QTLs with network and cis-eQTLs controlling biosynthetic pathways.
    PLoS genetics, Vol. 3, No. 9. (September 2007), pp. 1687-1701.
    by AM Wentzell, HC Rowe, BG Hansen, C Ticconi, BA Halkier, DJ Kliebenstein
    posted to no-tag by natstreet on 2008-09-04 15:05:08 as **
  • A transcriptional coactivator, AtGIF1, is involved in regulating leaf growth and morphology in Arabidopsis
    Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 36. (2004), pp. 13374-13379.
    by Jeong H Kim, Hans Kende
    posted to no-tag by natstreet on 2008-09-04 10:15:06 as **
  • Dissection of Enhanced Cell Expansion Processes in Leaves Triggered by a Defect in Cell Proliferation, with Reference to Roles of Endoreduplication
    Plant and Cell Physiology, Vol. 48, No. 2. (February 2007), pp. 278-286.
    by Fujikura, Ushio, Horiguchi, Gorou, Tsukaya, Hirokazu
    posted to no-tag by natstreet on 2008-09-04 10:08:03 as **
  • Comparative analysis of the small heat shock proteins in three angiosperm genomes identifies new subfamilies and reveals diverse evolutionary patterns.
    Cell stress & chaperones, Vol. 13, No. 2. (June 2008), pp. 127-142.
    by Elizabeth R Waters, Brian D Aevermann, Zipporah Sanders-Reed
    posted to no-tag by natstreet on 2008-09-02 16:33:51 as **
  • Using ESTs for phylogenomics: can one accurately infer a phylogenetic tree from a gappy alignment?
    BMC Evolutionary Biology, Vol. 8 (26 March 2008), 95.
    by Stefanie Hartmann, Todd J Vision
    posted to no-tag by natstreet on 2008-09-02 08:20:18 as ** along with 4 people and 1 group druvus stajich Patola aprasad Berkeley Mycology
  • INDELSCAN: a web server for comparative identification of species-specific and non-species-specific insertion/deletion events.
    Nucleic Acids Res (21 May 2007)
    by Feng-Chi C Chen, Chueng-Jong J Chen, Trees-Juen J Chuang
    posted to no-tag by natstreet on 2008-09-02 08:19:26 as ** along with 5 people and 1 group druvus jyuh aprasad dpollard lilou EisenLab
  • Profiling of microRNA expression by mRAP.
    Nat Protoc, Vol. 2, No. 12. (2007), pp. 3136-3145.
    by S Takada, H Mano
    posted to no-tag by natstreet on 2008-09-02 08:01:57 as ** along with 1 person jyuh
  • TREE HYBRIDIZATION AND GENOTYPIC VARIATION DRIVE CRYPTIC SPECIATION OF A SPECIALIST MITE HERBIVORE.
    Evolution; international journal of organic evolution (26 August 2008)
    by Luke M M Evans, Gerard J J Allan, Stephen M M Shuster, Scott A A Woolbright, Thomas G G Whitham
    posted to no-tag by natstreet on 2008-09-01 08:14:00 as **
  • adegenet: a R package for the multivariate analysis of genetic markers.
    Bioinformatics (Oxford, England) (8 April 2008)
    by Thibaut Jombart
    posted to no-tag by natstreet on 2008-09-01 08:12:48 as ** along with 3 people jyuh Ayest druvus
  • Rates and Patterns of Molecular Evolution in Inbred and Outbred Arabidopsis
    Mol Biol Evol, Vol. 19, No. 9. (1 September 2002), pp. 1407-1420.
    by Stephen I Wright, Beatrice Lauga, Deborah Charlesworth
    posted to no-tag by natstreet on 2008-09-01 08:12:11 as ** along with 1 person druvus
  • Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models
    Anal. Chem., Vol. 80, No. 1. (1 January 2008), pp. 115-122.
    by S Wiklund, E Johansson, L Sjostrom, EJ Mellerowicz, U Edlund, JP Shockcor, J Gottfries, T Moritz, J Trygg
    posted to no-tag by natstreet on 2008-08-29 14:23:00 as **
  • BioMercator: integrating genetic maps and QTL towards discovery of candidate genes
    Bioinformatics, Vol. 20, No. 14. (22 September 2004), pp. 2324-2326.
    by Anne Arcade, Aymeric Labourdette, Matthieu Falque, Brigitte Mangin, Fabien Chardon, Alain Charcosset, Johann Joets
    posted to no-tag by natstreet on 2008-08-29 10:47:38 as **
  • VistaClara: An expression browser plug-in for Cytoscape
    Bioinformatics (4 August 2008), btn368.
    by Robert Kincaid, Allan Kuchinsky, Michael Creech
    posted to no-tag by natstreet on 2008-08-29 10:47:04 as ** along with 1 person reyez
  • Cytoprophet: A Cytoscape plug-in for protein and domain interaction networks inference
    Bioinformatics (24 July 2008), btn380.
    by Faruck Morcos, Charles Lamanna, Marcin Sikora, Jesus Izaguirre
    posted to no-tag by natstreet on 2008-08-29 10:46:44 as ** along with 2 people phoenixzxl marck
  • Mapping the proteome of poplar and application to the discovery of drought-stress responsive proteins.
    Proteomics, Vol. 6, No. 24. (December 2006), pp. 6509-6527.
    by C Plomion, C Lalanne, S Claverol, H Meddour, A Kohler, MB Bogeat-Triboulot, A Barre, G Le Provost, H Dumazet, D Jacob, C Bastien, E Dreyer, A de Daruvar, JM Guehl, JM Schmitter, F Martin, M Bonneu
    posted to no-tag by natstreet on 2008-08-29 10:20:28 as **
  • Evolution and Development of Inflorescence Architectures
    Science, Vol. 316, No. 5830. (8 June 2007), pp. 1452-1456.
    by Przemyslaw Prusinkiewicz, Yvette Erasmus, Brendan Lane, Lawrence D Harder, Enrico Coen
    posted to no-tag by natstreet on 2008-08-26 14:59:41 as ** along with 1 person and 1 group sstoma VirtualPlants
  • Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis.
    Proc Natl Acad Sci U S A, Vol. 104, No. 15. (10 April 2007), pp. 6478-6483.
    by MY Hirai, K Sugiyama, Y Sawada, T Tohge, T Obayashi, A Suzuki, R Araki, N Sakurai, H Suzuki, K Aoki, H Goda, OI Nishizawa, D Shibata, K Saito
    posted to no-tag by natstreet on 2008-08-26 14:56:02 as ** along with 1 person and 1 group kengg Plantandetc
  • Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis
    Genome Biology, Vol. 8 (11 January 2007), R7.
    by Rodrigo A Gutierrez, Laurence Lejay, Alexis Dean, Francesca Chiaromonte, Dennis E Shasha, Gloria M Coruzzi
    posted to no-tag by natstreet on 2008-08-26 14:54:36 as ** along with 1 person xwbcn
  • A central integrator of transcription networks in plant stress and energy signalling
    Nature (01 August 2007)
    by Elena Baena-González, Filip Rolland, Johan M Thevelein, Jen Sheen
    posted to no-tag by natstreet on 2008-08-26 14:48:16 as ** along with 1 person saru
  • A draft gene regulatory network for cellular totipotency reprogramming during plant somatic embryogenesis
    Genomics, Vol. 90, No. 5. (November 2007), pp. 620-628.
    by Fanchang Zeng, Xianlong Zhang, Lei Cheng, Lisong Hu, Longfu Zhu, Jinglin Cao, Xiaoping Guo
    posted to no-tag by natstreet on 2008-08-26 14:37:37 as **
  • Deciphering gene regulatory networks that control seed development and maturation in Arabidopsis
    The Plant Journal, Vol. 54, No. 4. (May 2008), pp. 608-620.
    by Santos-Mendoza, Monica, Dubreucq, Bertrand, Baud, Sebastien, Parcy, Francois, Caboche, Michel, Lepiniec, Loic
    posted to no-tag by natstreet on 2008-08-26 13:17:27 as **
  • Gene regulatory network models for plant development
    Current Opinion in Plant Biology, Vol. 10, No. 1. (February 2007), pp. 83-91.
    by Elena R Alvarez-Buylla, Mariana Benítez, Enrique B Dávila, Álvaro Chaos, Carlos Espinosa-Soto, Pablo Padilla-Longoria
    posted to no-tag by natstreet on 2008-08-26 13:11:21 as **
  • Systems Approaches to Identifying Gene Regulatory Networks in Plants
    Annual Review of Cell and Developmental Biology, Vol. 24, No. 1. (2008)
    by Terri A Long, Siobhan M Brady, Philip N Benfey
    posted to no-tag by natstreet on 2008-08-26 12:51:57 as **
  • Gene regulatory networks and the evolution of animal body plans.
    Science, Vol. 311, No. 5762. (10 February 2006), pp. 796-800.
    by EH Davidson, DH Erwin
    posted to no-tag by natstreet on 2008-08-26 12:15:28 as ** along with 14 people and 4 groups eldan bayesian dpollard xico dchughes brixtonmc Liusha margaritis josepe cjeans sujaikumar Garamonfok jtomasch Ema EisenLab WetBiology G4ID Genetics-of-Gambling
  • Transcriptomic changes in wind-exposed poplar leaves are dependent on developmental stage
    Planta
    by Silvia Fluch, Christian Olmo, Stefanie Tauber, Michael Stierschneider, Dieter Kopecky, Thomas Reichenauer, Ildikó Matušíková
    posted to no-tag by natstreet on 2008-08-25 11:53:26 as **
  • Heterologous expression and functional characterization of two hybrid poplar cell-wall invertases
    Planta
    by Thomas Canam, Faride Unda, Shawn Mansfield
    posted to no-tag by natstreet on 2008-08-25 11:53:16 as **
  • Multilocus patterns of nucleotide polymorphism and the demographic history of Populus tremula
    Genetics (20 August 2008), genetics.108.090431.
    by Par K Ingvarsson
    posted to no-tag by natstreet on 2008-08-25 11:52:39 as **
  • Hybrid zones as a tool for identifying adaptive genetic variation in outbreeding forest trees: lessons from wild annual sunflowers (Helianthus spp.).
    Forest ecology and management, Vol. 197, No. 1-3. (August 2004), pp. 49-64.
    by Christian Lexer, Berthold Heinze, Ricardo Alia, Loren H H Rieseberg
    posted to no-tag by natstreet on 2008-08-19 11:43:59 as **
  • Comparative analysis of the transcriptomes of <i>Populus trichocarpa</i> and <i>Arabidopsis thaliana </i>suggests extensive evolution of gene expression regulation in angiosperms
    New Phytologist, Vol. 9999, No. 9999. (2008)
    by Tania Quesada, Zhen Li, Christopher Dervinis, Yao Li, Philip N Bocock, Gerald A Tuskan, George Casella, John, Matias Kirst
    posted to no-tag by natstreet on 2008-08-19 11:43:44 as **
  • Conserved upstream open reading frames in higher plants
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Michael Tran, Carolyn Schultz, Ute Baumann
    posted to no-tag by natstreet on 2008-08-18 10:21:52 as ** along with 1 person jmjimenez
  • Trait correlated expression combined with expression QTL analysis reveals biological pathways and candidate genes affecting water holding capacity of muscle
    BMC Genomics, Vol. 9 (31 July 2008), 367.
    by Siriluck Ponsuksili, Elisabeth Jonas, Eduard Murani, Chirawath Phatsara, Tiranun Srikanchai, Christina Walz, Manfred Schwerin, Karl Schellander, Klaus Wimmers
    posted to no-tag by natstreet on 2008-08-18 10:20:35 as ** along with 1 person barriot
  • SoyXpress: a database for exploring the soybean transcriptome
    BMC Genomics, Vol. 9 (01 August 2008), 368.
    by Kei, Martina V Stromvik
    posted to no-tag by natstreet on 2008-08-18 10:07:01 as ** along with 1 person GustavoLacerda
  • A method for detecting epistasis in genome-wide studies using case-control multi-locus association analysis
    BMC Genomics, Vol. 9, No. 1. (2008)
    by Javier Gayan, Antonio G Perez, Fernando Bermudo, Maria E Saez, Jose L Royo, Antonio Quintas, Jose J Galan, Francisco J Moron, Reposo R Lorca, Luis M Real, Agustin Ruiz
    posted to no-tag by natstreet on 2008-08-18 10:06:02 as ** along with 1 person provero
  • New clues to organ size control in plants
    Genome Biology, Vol. 9 (29 July 2008), 226.
    by László Bögre, Zoltán Magyar, Enrique López-Juez
    posted to no-tag by natstreet on 2008-08-18 10:04:49 as **
  • Variations in sucrose and ABA concentrations are concomitant with heteroblastic leaf shape changes in a rhythmically growing species (Quercus robur).
    Tree physiology, Vol. 26, No. 2. (February 2006), pp. 229-238.
    by R Le Hir, N Leduc, E Jeannette, JD Viemont, S Pelleschi-Travier
    posted to no-tag by natstreet on 2008-07-28 09:31:14 as **
  • A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula
    Plant Methods, Vol. 4 (08 July 2008), 18.
    by Klementina Kakar, Maren Wandrey, Tomasz Czechowski, Tanja Gaertner, Wolf-Rudiger Scheible, Mark Stitt, Ivone Torres-Jerez, Yongli Xiao, Julia Redman, Hank Wu, Foo Cheung, Christopher Town, Michael Udvardi
    posted to no-tag by natstreet on 2008-07-28 07:25:05 as **
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