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nedwards Wang [23 articles]

Recent papers posted to nedwards library by the author Wang. You can also see Wang everyone.
  • Exploring the Precursor Ion Exclusion Feature of Liquid Chromatography−Electrospray Ionization Quadrupole Time-of-Flight Mass Spectrometry for Improving Protein Identification in Shotgun Proteome Analysis
    Anal. Chem., Vol. 80, No. 12. (15 June 2008), pp. 4696-4710.
    by Nan Wang, Liang Li
    posted to tandem-mass-spectrometry proteomics dynamic-exclusion by nedwards on 2008-07-03 21:08:53 as **
  • A Mathematical Approach to Error Reduction in Mass Spectrometry
    Spectroscopy (2 May 2005)
    by Ming Gu, Yongdong Wang, Don Kuehl
    posted to peak-detection mass-spectrometry by nedwards on 2008-06-16 15:01:38 as **
  • A wide range of protein isoforms in serum and plasma uncovered by a quantitative intact protein analysis system
    PROTEOMICS, Vol. 5, No. 13. (2005), pp. 3343-3352.
    by David e, Rork Kuick, Hong Wang, Vladimir Galchev, Bin Deng, Rong Zhao, John Tra, Michael r, Ravi Amunugama, David Allen, Angela k, John r, Philip Andrews, Gilbert s, Samir m
    posted to no-tag by nedwards on 2008-06-13 17:14:13 as **
  • Intact-protein-based High-resolution Three-dimensional Quantitative Analysis System for Proteome Profiling of Biological Fluids
    Mol Cell Proteomics, Vol. 4, No. 5. (1 May 2005), pp. 618-625.
    by Hong Wang, Shawn G Clouthier, Vladimir Galchev, David E Misek, Ulrich Duffner, Chang-Ki Min, Rong Zhao, John Tra, Gilbert S Omenn, James L Ferrara, Samir M Hanash
    posted to no-tag by nedwards on 2008-06-13 17:12:41 as **
  • Contribution of protein fractionation to depth of analysis of the serum and plasma proteomes.
    J Proteome Res, Vol. 6, No. 9. (September 2007), pp. 3558-3565.
    by V Faca, SJ Pitteri, L Newcomb, V Glukhova, D Phanstiel, A Krasnoselsky, Q Zhang, J Struthers, H Wang, J Eng, M Fitzgibbon, M McIntosh, S Hanash
    posted to no-tag by nedwards on 2008-06-13 17:08:18 as ** along with 1 person jyuh
  • Dependence network modeling for biomarker identification
    Bioinformatics, Vol. 23, No. 2. (15 January 2007), pp. 198-206.
    by Qiu, Peng, Wang, Z Jane, Liu, KJ Ray, Hu, Zhang-Zhi, Wu, H Cathy
    posted to systems-biology by nedwards on 2008-05-02 15:12:02 as **
  • Ensemble dependence model for classification and prediction of cancer and normal gene expression data
    Bioinformatics, Vol. 21, No. 14. (15 July 2005), pp. 3114-3121.
    by Peng Qiu, Jane Z Wang, Ray KJ Liu
    posted to systems-biology correlation by nedwards on 2008-05-02 14:56:33 as **
  • The properties of high-dimensional data spaces: implications for exploring gene and protein expression data
    Nat Rev Cancer, Vol. 8, No. 1. (January 2008), pp. 37-49.
    by Robert Clarke, Habtom W Ressom, Antai Wang, Jianhua Xuan, Minetta C Liu, Edmund A Gehan, Yue Wang
    posted to data-integration by nedwards on 2008-04-17 16:50:01 as ** along with 8 people and 1 group brianb jyuh tmmurali dwf frohike cjeans shikin blackm0k Bioinformatics
  • Calibrating E-values for MS2 database search methods
    Biology Direct, Vol. 2 (05 November 2007), 26.
    by Gelio Alves, Aleksey Y Ogurtsov, Wells W Wu, Guanghui Wang, Rong-Fong Shen, Yi-Kuo Yu
    posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2008-04-02 19:37:35 as **
  • Integration of 18O Labeling and Solution Isoelectric Focusing in a Shotgun Analysis of Mitochondrial Proteins
    J. Proteome Res., Vol. 6, No. 12. (7 December 2007), pp. 4601-4607.
    by Jinshan Wang, Peter Gutierrez, Nathan Edwards, Catherine Fenselau
    posted to isotope-label mass-spectrometry protein-quantitation proteomics by nedwards on 2007-12-16 19:55:55 as **
  • Label-free LC-MS/MS quantitative proteomics for large-scale biomarker discovery in complex samples.
    J Sep Sci (2 August 2007)
    by Yishai Levin, Emanuel Schwarz, Lan Wang, F Markus M Leweke, Sabine Bahn
    posted to label-free mass-spectrometry protein-quantitation proteomics by nedwards on 2007-12-11 14:08:36 as ** along with 1 person jyuh
  • Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias.
    Genome Res, Vol. 15, No. 8. (August 2005), pp. 1118-1126.
    by R Wang, JT Prince, EM Marcotte
    posted to label-free mass-spectrometry protein-quantitation proteomics proteomics-data by nedwards on 2007-12-10 22:24:45 as ** along with 2 people bjorns madhadron
  • A statistical method for chromatographic alignment of LC-MS data
    Biostatistics, Vol. 8, No. 2. (April 2007), pp. 357-367.
    by Pei Wang, Hua Tang, Matthew P Fitzgibbon, Martin Mcintosh, Marc Coram, Eugene Yi, Ruedi Aebersold
    posted to label-free mass-spectrometry protein-quantitation proteomics by nedwards on 2007-12-10 21:45:56 as ** along with 1 person BIBLIOma
  • Alignment of Mass Spectrometry Data by Clique Finding and Optimization
    Systems Biology and Computational Proteomics (2007), pp. 119-129.
    by Daniel Fasulo, Anne-Katrin Emde, Lu-Yong Wang, Karin Noy, Nathan Edwards
    posted to label-free mass-spectrometry protein-quantitation proteomics by nedwards on 2007-10-04 15:30:13 as **
  • Comprehensive yeast proteome analysis using a capillary isoelectric focusing-based multidimensional separation platform coupled with ESI-MS/MS
    PROTEOMICS, Vol. 7, No. 8. (2007), pp. 1178-1187.
    by Weijie Wang, Tong Guo, Tao Song, Cheng S Lee, Brian M Balgley
    posted to peptide-identification peptide-identification-statistics proteomics tandem-mass-spectrometry by nedwards on 2007-09-13 20:29:28 as **
  • Human X-Box binding protein-1 confers both estrogen independence and antiestrogen resistance in breast cancer cell lines
    FASEB J. (27 July 2007), fj.06-7990com.
    by Bianca P Gomez, Rebecca B Riggins, Ayesha N Shajahan, Uwe Klimach, Aifen Wang, Anatasha C Crawford, Yuelin Zhu, Alan Zwart, Mingyue Wang, Robert Clarke
    posted to alternative-splicing breast-cancer cancer by nedwards on 2007-09-12 02:29:26 as **
  • A point-process model for rapid identification of post-translational modifications.
    Pac Symp Biocomput (2006), pp. 327-338.
    by B Yan, T Zhou, P Wang, Z Liu, VA Emanuele, V Olman, Y Xu
    posted to peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-30 16:34:00 as **
  • A protein database constructed from low-coverage genomic sequence of Bacillus megaterium and its use for accelerated proteomic analysis
    Journal of Biotechnology, Vol. 124, No. 3. (25 July 2006), pp. 486-495.
    by Jibin Sun, Wei Wang, Claudia Hundertmark, An-Ping Zeng, Dieter Jahn, Wolf-Dieter Deckwer
    posted to bacillus genome-annotation microorganism-identification by nedwards on 2007-08-22 15:55:28 as **
  • Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation
    Nat Biotech, Vol. 25, No. 1. (February 2007), pp. 117-124.
    by Peng Lu, Christine Vogel, Rong Wang, Xin Yao, Edward M Marcotte
    posted to mass-spectrometry protein-quantitation protein-quantitation-statistics proteomics by nedwards on 2007-08-14 20:33:12 as ** along with 9 people and 1 group ptrobajo caseybrown ihpark jyuh balabu nickluscombe aswin nicoleq dylan77 EBI-regulation
  • tPatternHunter: gapped, fast and sensitive translated homology search
    Bioinformatics, Vol. 21, No. 4. (15 February 2005), pp. 542-544.
    by Derek Kisman, Ming Li, Bin Ma, Li Wang
    posted to gapped-seeds sequence-alignment string-matching by nedwards on 2007-08-14 17:18:14 as **
  • Overview of the HUPO Plasma Proteome Project: results from the pilot phase with 35 collaborating laboratories and multiple analytical groups, generating a core dataset of 3020 proteins and a publicly-available database.
    Proteomics, Vol. 5, No. 13. (August 2005), pp. 3226-3245.
    by GS Omenn, DJ States, M Adamski, TW Blackwell, R Menon, H Hermjakob, R Apweiler, BB Haab, RJ Simpson, JS Eddes, EA Kapp, RL Moritz, DW Chan, AJ Rai, A Admon, R Aebersold, J Eng, WS Hancock, SA Hefta, H Meyer, YK Paik, JS Yoo, P Ping, J Pounds, J Adkins, X Qian, R Wang, V Wasinger, CY Wu, X Zhao, R Zeng, A Archakov, A Tsugita, I Beer, A Pandey, M Pisano, P Andrews, H Tammen, DW Speicher, SM Hanash
    posted to hupo-ppp proteomics proteomics-projects proteomics-data-repository by nedwards on 2007-08-08 14:14:11 as ** along with 2 people kentsis pierre3956
  • A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS.
    Bioinformatics, Vol. 22, No. 15. (1 August 2006), pp. 1902-1909.
    by M Bellew, M Coram, M Fitzgibbon, M Igra, T Randolph, P Wang, D May, J Eng, R Fang, C Lin, J Chen, D Goodlett, J Whiteaker, A Paulovich, M McIntosh
    posted to proteomics-software proteomics protein-quantitation peak-detection mass-spectrometry isotope-cluster-modeling by nedwards on 2007-08-07 17:03:04 as *** along with 2 people olberd Gehrke
  • InsPecT: identification of post translationally modified peptides from tandem mass spectra.
    Anal Chem, Vol. 77, No. 14. (15 July 2005), pp. 4626-4639.
    by S Tanner, H Shu, A Frank, LC Wang, E Zandi, M Mumby, PA Pevzner, V Bafna
    posted to peptide-identification proteomics tandem-mass-spectrometry by nedwards on 2007-08-07 15:22:15 as ** along with 1 person hoangmit
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