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olberd quantification [18 articles]

Recent papers added to olberd library classified by the tag quantification. You can also see everyone's quantification.
  • Quantitative Proteomic Analysis by Accurate Mass Retention Time Pairs
    Anal. Chem., Vol. 77, No. 7. (1 April 2005), pp. 2187-2200.
    by JC Silva, R Denny, CA Dorschel, M Gorenstein, IJ Kass, GZ Li, T Mckenna, MJ Nold, K Richardson, P Young, S Geromanos
    posted to label-free mse proteomics quantification quantitation by olberd on 2008-06-12 02:27:10 as **
  • Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents.
    Mol Cell Proteomics, Vol. 3, No. 12. (December 2004), pp. 1154-1169.
    posted to itraq labelled proteomics quantification quantitation by olberd on 2008-06-12 02:02:48 as *****
  • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    Mol Cell Proteomics (20 May 2002), M200025-MCP200.
    by Shao-En Ong, Blagoy Blagoev, Irina Kratchmarova, Dan B Kristensen, Hanno Steen, Akhilesh Pandey, Matthias Mann
    posted to labelled proteomics quantification quantitation silac by olberd on 2008-06-12 01:53:52 as *****
  • Chemical probes and tandem mass spectrometry: a strategy for the quantitative analysis of proteomes and subproteomes.
    Current opinion in chemical biology, Vol. 8, No. 1. (February 2004), pp. 66-75.
    by H Zhang, W Yan, R Aebersold
    posted to labelled proteomics quantification quantitation by olberd on 2008-06-12 00:52:43 as **
  • Capture and analysis of quantitative proteomic data
    PROTEOMICS, Vol. 9999, No. 9999. (2007), NA.
    by King W Lau, Andrew R Jones, Neil Swainston, Jennifer A Siepen, Simon J Hubbard
  • Comparative LC-MS: a landscape of peaks and valleys.
    Proteomics, Vol. 8, No. 4. (February 2008), pp. 731-749.
  • MapQuant: open-source software for large-scale protein quantification.
    Proteomics, Vol. 6, No. 6. (March 2006), pp. 1770-1782.
    by KC Leptos, DA Sarracino, JD Jaffe, B Krastins, GM Church
    posted to mapquant processing proteomics quantification quantitation software by olberd on 2008-05-08 15:53:43 as ***
  • Simultaneous Qualitative and Quantitative Analysis of theEscherichia coli Proteome: A Sweet Tale
    Mol Cell Proteomics, Vol. 5, No. 4. (1 April 2006), pp. 589-607.
    by Jeffrey C Silva, Richard Denny, Craig Dorschel, Marc V Gorenstein, Guo-Zhong Li, Keith Richardson, Daniel Wall, Scott J Geromanos
    posted to mse normalization proteomics quantification quantitation by olberd on 2008-05-05 14:14:03 as read
  • Absolute Quantification of Proteins by LCMSE: A Virtue of Parallel ms Acquisition
    Mol Cell Proteomics, Vol. 5, No. 1. (1 January 2006), pp. 144-156.
    by Jeffrey C Silva, Marc V Gorenstein, Guo-Zhong Li, Johannes P Vissers, Scott J Geromanos
  • Quantitative Proteomic Analysis of Drug-Induced Changes in Mycobacteria
    J. Proteome Res., Vol. 5, No. 1. (6 January 2006), pp. 54-63.
    by MA Hughes, JC Silva, SJ Geromanos, CA Townsend
    posted to mse proteomics quantification quantitation by olberd on 2008-05-05 14:08:43 as read
  • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.
    Genome Biol, Vol. 3, No. 7. (18 June 2002)
  • Algorithms for the Automated Absolute Quantification of Diagnostic Markers in Complex Proteomics Samples
    Computational Life Sciences (2005), pp. 151-162.
    by Clemens Gröpl, Eva Lange, Knut Reinert, Oliver Kohlbacher, Marc Sturm, Christian G Huber, Bettina M Mayr, Christoph L Klein
    posted to openms proteomics quantification quantitation by olberd on 2008-05-04 15:29:22 as read
  • A Fast and Accurate Algorithm for the Quantification of Peptides from Mass Spectrometry Data
    Research in Computational Molecular Biology (2007), pp. 473-487.
    by Ole Schulz-Trieglaff, Rene Hussong, Clemens Gröpl, Andreas Hildebrandt, Knut Reinert
  • A quantitative analysis software tool for mass spectrometry–based proteomics
    Nature Methods, Vol. 5, No. 4. (16 March 2008), pp. 319-322.
    by Sung K Park, John D Venable, Tao Xu, John R Yates
  • Label-free comparative analysis of proteomics mixtures using chromatographic alignment of high-resolution muLC-MS data.
    Anal Chem, Vol. 80, No. 4. (15 February 2008), pp. 961-971.
    by GL Finney, AR Blackler, MR Hoopmann, JD Canterbury, CC Wu, MJ MacCoss
  • Computational methods for the comparative quantification of proteins in label-free LCn-MS experiments
    Brief Bioinform (28 September 2007), bbm046.
    by Jason W Wong, Matthew J Sullivan, Gerard Cagney
  • An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data.
    J Proteome Res, Vol. 7, No. 1. (January 2008), pp. 51-61.
    by LN Mueller, MY Brusniak, DR Mani, R Aebersold
  • A label-free quantification method by MS/MS TIC compared to SILAC and spectral counting in a proteomics screen.
    Proteomics, Vol. 8, No. 5. (March 2008), pp. 994-999.
    by JM Asara, HR Christofk, LM Freimark, LC Cantley
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