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renatomilani library [210 articles]

Статьи, недавно добавленные в библиотеку renatomilani .
  • Use and misuse of the gene ontology annotations
    Nature Reviews Genetics
    by SY Rhee, V Wood, K Dolinski, S Draghici
    posted to ontology gene by renatomilani on 2008-05-16 21:36:45 as **
  • Genomics: Annotating with proteomes
    Nat Rev Genet, Vol. 9, No. 6. (June 2008), pp. 418-418.
    by Patrick Goymer
    posted to annotation by renatomilani on 2008-05-16 21:33:52 as **
  • Genome-Scale Proteomics Reveals Arabidopsis thaliana Gene Models and Proteome Dynamics
    Science (24 April 2008), 1157956.
    by Katja Baerenfaller, Jonas Grossmann, Monica A Grobei, Roger Hull, Matthias Hirsch-Hoffmann, Shaul Yalovsky, Philip Zimmermann, Ueli Grossniklaus, Wilhelm Gruissem, Sacha Baginsky
    posted to proteome by renatomilani on 2008-05-16 21:32:53 as ** along with 2 people caseybrown xwbcn
  • Analysis of the human kinome using methods including fold recognition reveals two novel kinases.
    PLoS ONE, Vol. 3, No. 2. (2008)
    by KM Briedis, A Starr, PE Bourne
    posted to methods kinome bioinformatics by renatomilani on 2008-05-16 20:27:58 as **
  • Editorial: Focus Issue: The Kinome--Techniques and Methods for Analysis
    Science STKE, Vol. 2002, No. 162. (10 December 2002), 13.
    by LB Ray, NR Gough
    posted to methods kinome by renatomilani on 2008-05-16 20:24:28 as ****
  • Probing the kinome
    Nature Methods, Vol. 2, No. 3., pp. 225-232.
    by Laura Bonetta
    posted to methods kinome by renatomilani on 2008-05-16 20:16:03 as ****
  • Automated extraction of meaningful pathways from quantitative proteomics data
    Brief Funct Genomic Proteomic, Vol. 7, No. 2. (1 March 2008), pp. 136-146.
    by Josselin Noirel, Saw Y Ow, Guido Sanguinetti, Alfonso Jaramillo, Phillip C Wright
    posted to proteome bioinformatics by renatomilani on 2008-05-13 20:32:21 as **
  • ECOLOGY: How the Sahara Became Dry
    Science, Vol. 320, No. 5877. (9 May 2008), pp. 752-753.
    by Jonathan A Holmes
    posted to climate by renatomilani on 2008-05-09 21:24:24 as **
  • Recurrent Initiation: A Mechanism for Triggering p53 Pulses in Response to DNA Damage
    Molecular Cell, Vol. 30, No. 3. (9 May 2008), pp. 277-289.
    by Eric Batchelor, Caroline S Mock, Irun Bhan, Alexander Loewer, Galit Lahav
    posted to dna-damage by renatomilani on 2008-05-09 12:43:34 as **
  • Colocalization of Sensors Is Sufficient to Activate the DNA Damage Checkpoint in the Absence of Damage
    Molecular Cell, Vol. 30, No. 3. (9 May 2008), pp. 267-276.
    by Carla Y Bonilla, Justine A Melo, David P Toczyski
    posted to dna-damage by renatomilani on 2008-05-09 12:43:14 as **
  • Microarray-Based Genetic Screen Defines SAW1, a Gene Required for Rad1/Rad10-Dependent Processing of Recombination Intermediates
    Molecular Cell, Vol. 30, No. 3. (9 May 2008), pp. 325-335.
    by Fuyang Li, Junchao Dong, Xuewen Pan, Ji-Hyun Oum, Jef D Boeke, Sang E Lee
    posted to microarray by renatomilani on 2008-05-09 12:40:07 as **
  • Interaction with PI3-kinase contributes to the cytotoxic activity of Apoptin
    Oncogene, Vol. aop, No. current.
    by S Maddika, E Wiechec, SR Ande, IK Poon, U Fischer, S Wesselborg, DA Jans, K Schulze-Osthoff, M Los
    posted to kinase by renatomilani on 2008-05-08 17:45:00 as **
  • Aberrant expression of extracellular signal-regulated kinase 5 in human prostate cancer
    Oncogene, Vol. aop, No. current.
    by SRC Mccracken, A Ramsay, R Heer, ME Mathers, BL Jenkins, J Edwards, CN Robson, R Marquez, P Cohen, HY Leung
    posted to kinase by renatomilani on 2008-05-08 17:44:48 as **
  • A Note on the False Discovery Rate and Inconsistent Comparisons between Experiments.
    Bioinformatics (Oxford, England) (19 April 2008)
    by Roger Higdon, Gerald van V Belle, Eugene Kolker
    posted to bioinformatics by renatomilani on 2008-05-08 17:44:31 as ** along with 5 people giovenko wisdom_love girschick jyuh shigepong
  • Computational intelligence approaches for pattern discovery in biological systems
    Brief Bioinform (5 May 2008), bbn021.
    by Gary B Fogel
    posted to review bioinformatics by renatomilani on 2008-05-08 04:41:03 as ** along with 1 person maximilianh
  • Inferring the role of transcription factors in regulatory networks
    BMC Bioinformatics, Vol. 9 (06 May 2008), 228.
    by Philippe Veber, Carito Guziolowski, Michel Le Borgne, Ovidiu Radulescu, Anne Siegel
    posted to network expression bioinformatics by renatomilani on 2008-05-08 04:37:56 as ** along with 3 people idonaldson maralena heliopais
  • Signaling Survival Strategies
    Sci. Signal., Vol. 1, No. 18. (6 May 2008), ec170.
    by Bryan L Ray
    posted to signaling by renatomilani on 2008-05-08 04:36:13 as **
  • Kinases in the Polyadenylation Complex
    Sci. Signal., Vol. 1, No. 18. (6 May 2008), ec160.
    by Nancy R Gough
    posted to kinase by renatomilani on 2008-05-08 04:35:11 as **
  • Understanding NF-[kappa]B signaling via mathematical modeling
    Mol Syst Biol, Vol. 4 (6 May 2008)
    by Raymond Cheong, Alexander Hoffmann, Andre Levchenko
    posted to signaling modelling by renatomilani on 2008-05-07 19:47:16 as ** along with 1 person csgillespie
  • Activation of PI3K/Akt and MAPK pathways regulates Myc-mediated transcription by phosphorylating and promoting the degradation of Mad1
    Proceedings of the National Academy of Sciences (1 May 2008), 0802785105.
    by Jidong Zhu, John Blenis, Junying Yuan
    posted to pathway kinase by renatomilani on 2008-05-05 18:31:58 as **
  • Phosphorylation by p38 MAPK as an Alternative Pathway for GSK3beta Inactivation
    Science, Vol. 320, No. 5876. (2 May 2008), pp. 667-670.
    by Tina M Thornton, Gustavo Pedraza-Alva, Bin Deng, David C Wood, Alexander Aronshtam, James L Clements, Guadalupe Sabio, Roger J Davis, Dwight E Matthews, Bradley Doble, Mercedes Rincon
    posted to signaling kinase by renatomilani on 2008-05-05 18:18:58 as ** along with 2 people mtan lisa1
  • Application of Active and Kinase-Deficient Kinome Collection for Identification of Kinases Regulating Hedgehog Signaling
    Cell, Vol. 133, No. 3. (2 May 2008), pp. 537-548.
    by Markku Varjosalo, Mikael Björklund, Fang Cheng, Heidi Syvänen, Teemu Kivioja, Sami Kilpinen, Zairen Sun, Olli Kallioniemi, Hendrik G Stunnenberg, Wei-Wu He, Päivi Ojala, Jussi Taipale
    posted to kinome by renatomilani on 2008-05-05 18:17:11 as ** along with 1 person Terkko
  • High-throughput kinase profiling as a platform for drug discovery
    Nat Rev Drug Discov, Vol. 7, No. 5. (May 2008), pp. 391-397.
    by David M Goldstein, Nathanael S Gray, Patrick P Zarrinkar
    posted to kinase drug by renatomilani on 2008-04-30 19:23:47 as ***** along with 3 people Yanno superpyrin oelemento
  • A critical examination of stoichiometric and path-finding approaches to metabolic pathways
    Brief Bioinform (24 April 2008), bbn018.
    by Francisco J Planes, John E Beasley
    posted to pathway metabolic bioinformatics by renatomilani on 2008-04-29 21:51:53 as **
  • IMGT, a system and an ontology that bridge biological and computational spheres in bioinformatics
    Brief Bioinform (19 April 2008), bbn014.
    by Lefranc Marie-Paule, Veronique Giudicelli, Laetitia Regnier, Patrice Duroux
    posted to bioinformatics by renatomilani on 2008-04-29 21:50:20 as ** along with 1 person sci91078
  • A Quick Guide for Computer-Assisted Instruction in Computational Biology and Bioinformatics
    PLoS Computational Biology
    by MJ Costa, E Galembeck, GA Marson, BB Torres
    posted to bioinformatics by renatomilani on 2008-04-29 21:41:34 as **
  • Large-scale computational and statistical analyses of high transcription potentialities in 32 prokaryotic genomes
    Nucl. Acids Res. (25 April 2008), gkn135.
    by Christine Sinoquet, Sylvain Demey, Frederique Braun
    posted to bioinformatics by renatomilani on 2008-04-29 21:36:29 as **
  • Comparative conservation analysis of the human mitotic phosphoproteome
    Bioinformatics (20 April 2008), btn197.
    by Rainer Malik, Erich A Nigg, Roman Korner
    posted to proteome kinase bioinformatics by renatomilani on 2008-04-29 21:32:56 as **
  • A Global Pathway Crosstalk Network
    Bioinformatics (23 April 2008), btn200.
    by Yong Li, Pankaj Agarwal, Dilip Rajagopalan
    posted to pathway bioinformatics by renatomilani on 2008-04-29 21:32:12 as ** along with 3 people bootsy maralena thomaskelder
  • Illuminating drug discovery with biological pathways.
    FEBS Lett, Vol. 579, No. 8. (21 March 2005), pp. 1872-1877.
    by G Apic, T Ignjatovic, S Boyer, RB Russell
    posted to systems pipeline pathway drug by renatomilani on 2008-04-29 20:14:28 as ** along with 5 people kuhn Borelli chad_davis wnpx mikaelhuss
  • Data Pipelines and Virtual Screening: Automating the Process
    QSAR & Combinatorial Science, Vol. 25, No. 12. (2006), pp. 1181-1191.
    by DR Brown, S Varma-O'Brien, D Rogers
    posted to pipeline by renatomilani on 2008-04-29 20:06:22 as **
  • An analytical pipeline for genomic representations used for cytosine methylation studies
    Bioinformatics (18 March 2008), btn096.
    by Reid F Thompson, Mark Reimers, Batbayar Khulan, Mathieu Gissot, Todd A Richmond, Quan Chen, Xin Zheng, Kami Kim, John M Greally
    posted to pipeline by renatomilani on 2008-04-29 19:55:01 as ** along with 1 person epigenetics
  • Information quality in proteomics
    Brief Bioinform, Vol. 9, No. 2. (1 March 2008), pp. 174-188.
    by David A Stead, Norman W Paton, Paolo Missier, Suzanne M Embury, Cornelia Hedeler, Binling Jin, Alistair J Brown, Alun Preece
    posted to review proteome pipeline bioinformatics by renatomilani on 2008-04-29 19:53:13 as ***** along with 1 person neils
  • Rare Structural Variants Disrupt Multiple Genes in Neurodevelopmental Pathways in Schizophrenia
    Science (27 March 2008), 1155174.
    by Tom Walsh, Jon M Mcclellan, Shane E Mccarthy, Anjene M Addington, Sarah B Pierce, Greg M Cooper, Alex S Nord, Mary Kusenda, Dheeraj Malhotra, Abishek Bhandari, Sunday M Stray, Caitlin F Rippey, Patricia Roccanova, Vlad Makarov, B Lakshmi, Robert L Findling, Linmarie Sikich, Thomas Stromberg, Barry Merriman, Nitin Gogtay, Philip Butler, Kristen Eckstrand, Laila Noory, Peter Gochman, Robert Long, Zugen Chen, Sean Davis, Carl Baker, Evan E Eichler, Paul S Meltzer, Stanley F Nelson, Andrew B Singleton, Ming K Lee, Judith L Rapoport, Mary-Claire King, Jonathan Sebat
    posted to signaling schizophrenia pathway by renatomilani on 2008-04-29 19:34:37 as ** along with 7 people and 1 group lisa1 djkt giovanni sekulerlab GustavoLacerda MWagner applebyb VisionLab
  • Systematic discovery of in vivo phosphorylation networks.
    Cell, Vol. 129, No. 7. (29 June 2007), pp. 1415-1426.
    by R Linding, LJ Jensen, GJ Ostheimer, MA van Vugt, C Jørgensen, IM Miron, F Diella, K Colwill, L Taylor, K Elder, P Metalnikov, V Nguyen, A Pasculescu, J Jin, JG Park, LD Samson, JR Woodgett, RB Russell, P Bork, MB Yaffe, T Pawson
    posted to network bioinformatics by renatomilani on 2008-04-29 14:15:07 as ** along with 12 people and 2 groups daed Evangelia jyuh skhadar julius zwang cdppublications lp2 psique robrussell snowcrash larsjuhljensen SysbioMPI-TCells Durbin group
  • Invited review: Lipopolysaccharide recognition, internalisation, signalling and other cellular effects
    INNATE IMMUN, Vol. 7, No. 5. (1 October 2001), pp. 335-348.
    by Sander H Diks, Sander J van Deventer, Maikel P Peppelenbosch
    posted to groningen by renatomilani on 2008-04-29 13:16:04 as **
  • AMPK Phosphorylation of Raptor Mediates a Metabolic Checkpoint
    Molecular Cell
    by DM Gwinn, Et
    posted to signaling bioinformatics ampk by renatomilani on 2008-04-28 21:09:05 as **
  • Wnt signalling and its impact on development and cancer
    Nat Rev Cancer, Vol. 8, No. 5. (May 2008), pp. 387-398.
    by Alexandra Klaus, Walter Birchmeier
    posted to wnt signaling cancer by renatomilani on 2008-04-28 20:50:46 as ** along with 1 person cmzmasek
  • Ron receptor tyrosine kinase-dependent hepatic neutrophil recruitment and survival benefit in a murine model of bacterial peritonitis.
    Critical care medicine (21 April 2008)
    by Charles C Caldwell, Andre Martignoni, Mike A Leonis, Hari K Ondiveeran, Alison E Fox-Robichaud, Susan E Waltz
    posted to kinase by renatomilani on 2008-04-25 15:40:40 as **
  • Biologists initiate plan to map human proteome : Nature News
    posted to proteome by renatomilani on 2008-04-24 15:33:15 as ** along with 1 person cjeans
  • Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase
    Proceedings of the National Academy of Sciences (22 April 2008), 0800770105.
    by Ville R Kaila, Michael I Verkhovsky, Gerhard Hummer, Marten Wikstrom
    posted to structure molecular modelling dynamics by renatomilani on 2008-04-23 13:52:01 as ** along with 1 person Terkko
  • Pfam 10 years on: 10 000 families and still growing.
    Brief Bioinform (15 March 2008)
    by Stephen John J Sammut, Robert D D Finn, Alex Bateman
    posted to bioinformatics by renatomilani on 2008-04-23 13:21:10 as ** along with 2 people neils dullhunk
  • Identification of RIP1 kinase as a specific cellular target of necrostatins
    Nat Chem Biol, Vol. 4, No. 5. (May 2008), pp. 313-321.
    by Alexei Degterev, Junichi Hitomi, Megan Germscheid, Irene L Ch'en, Olga Korkina, Xin Teng, Derek Abbott, Gregory D Cuny, Chengye Yuan, Gerhard Wagner, Stephen M Hedrick, Scott A Gerber, Alexey Lugovskoy, Junying Yuan
    posted to kinase by renatomilani on 2008-04-22 20:07:00 as **
  • Rethinking Pseudokinases
    Cell
    by N Kannan, SS Taylor
    posted to kinase by renatomilani on 2008-04-18 15:44:49 as **
  • Protein tyrosine phosphatase PTPN13 negatively regulates Her2/ErbB2 malignant signaling
    Oncogene, Vol. aop, No. current.
    by JH Zhu, R Chen, W Yi, GT Cantin, C Fearns, Y Yang, JR Yates, JD Lee
    posted to cancer signaling by renatomilani on 2008-04-17 19:11:58 as **
  • CK2 controls TRAIL and Fas sensitivity by regulating FLIP levels in endometrial carcinoma cells
    Oncogene, Vol. aop, No. current.
    by D Llobet, N Eritja, M Encinas, N Llecha, A Yeramian, J Pallares, A Sorolla, FJ Gonzalez-Tallada, X Matias-Guiu, X Dolcet
    posted to cancer signaling by renatomilani on 2008-04-17 19:11:33 as **
  • Multiple kinases in the interferon-gamma response
    Proceedings of the National Academy of Sciences (15 April 2008), 0710814105.
    by D Watling, CR Carmo, IM Kerr, AP Costa-Pereira
    posted to kinase kinome by renatomilani on 2008-04-16 18:09:12 as **
  • annot8r: rapid assignment of GO, EC and KEGG annotations
    BMC Bioinformatics, Vol. 9 (09 April 2008), 180.
    by Ralf Schmid, Mark L Blaxter
    posted to bioinformatics by renatomilani on 2008-04-10 03:59:14 as ** along with 1 person jyuh
  • Darwinian Evolution on a Chip
    PLoS Biology, Vol. 6, No. 4. (1 April 2008), e85.
    by Brian M Paegel, Gerald F Joyce
    posted to evolution by renatomilani on 2008-04-09 03:54:41 as ** along with 11 people and 2 groups barry fdsayre cfleet stevanspringer operon xingxu Minty TomQ phoenixzxl melting dlobo Bioinformatics GEB
  • Kinome profiling of Arabidopsis using arrays of kinase consensus substrates
    Plant Methods, Vol. 3 (12 February 2007), 3.
    by Tita Ritsema, Jos Joore, Wilbert van Workum, Corne MJ Pieterse
    posted to kinase kinome by renatomilani on 2008-04-07 14:09:37 as **
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