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sameetmehta library [65 articles]

Статьи, недавно добавленные в библиотеку sameetmehta .
  • notes Dynamic Regulation of Nucleosome Positioning in the Human Genome
    Cell, Vol. 132, No. 5. (7 March 2008), pp. 887-898.
    by Dustin E Schones, Kairong Cui, Suresh Cuddapah, Tae-Young Roh, Artem Barski, Zhibin Wang, Gang Wei, Keji Zhao
    posted to chipseq chip by sameetmehta on 2008-06-17 12:55:46 as read along with 7 people mikaelhuss vega aalibes dchughes sleepingcell idonaldson oelemento
  • Eukaryotic transcription factor binding sites - modeling and integrative search methods
    Bioinformatics (21 April 2008), btn198.
    by Sridhar Hannenhalli
    posted to transc tfbs by sameetmehta on 2008-05-20 01:32:04 as ** along with 7 people chad_davis heliopais jyuh Ema bootsy maximilianh hplatero
  • VisANT: an integrative framework for networks in systems biology
    Brief Bioinform (7 May 2008), bbn020.
    by Zhenjun Hu, Evan S Snitkin, Charles Delisi
    posted to visualization systems graph biology by sameetmehta on 2008-05-13 04:50:49 as ***** along with 4 people and 1 group maoxizeng maralena bootsy jyuh Bioinformatics
  • Modeling the adaptive immune system: predictions and simulations.
    Bioinformatics (28 November 2007)
    by Claus Lundegaard, Ole Lund, Can Kesmir, Søren Brunak, Morten Nielsen
    posted to adaptive immunity immunology by sameetmehta on 2007-12-09 07:19:35 as ** along with 2 people Ema niallhaslam
  • Biogenic formation of photoactive arsenic-sulfide nanotubes by Shewanella sp. strain HN-41
    Proceedings of the National Academy of Sciences (7 December 2007), 0707595104.
    by Ji-Hoon Lee, Min-Gyu Kim, Bongyoung Yoo, Nosang V Myung, Jongsun Maeng, Takhee Lee, Alice C Dohnalkova, James K Fredrickson, Michael J Sadowsky, Hor-Gil Hur
    posted to amazing nanotechnology by sameetmehta on 2007-12-08 11:55:16 as ** along with 1 person rschulz
  • Transcriptional regulatory networks in Saccharomyces cerevisiae.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804.
    by TI Lee, NJ Rinaldi, F Robert, DT Odom, Z Bar-Joseph, GK Gerber, NM Hannett, CT Harbison, CM Thompson, I Simon, J Zeitlinger, EG Jennings, HL Murray, DB Gordon, B Ren, JJ Wyrick, JB Tagne, TL Volkert, E Fraenkel, DK Gifford, RA Young
    posted to networks transcription trns by sameetmehta on 2007-12-03 14:49:09 as ** along with 24 people and 2 groups Takayuki Borelli kristallreiner brant camster snuppepuppan icases forluvoft ggrot alokm opheliav samal cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike dbk-lab TNT
  • Systems biology. Life's complexity pyramid.
    Science, Vol. 298, No. 5594. (25 October 2002), pp. 763-764.
    by ZN Oltvai, AL Barabási
    posted to biology body holistic study systems whole by sameetmehta on 2007-12-03 14:41:53 as ** along with 7 people and 6 groups eldan yas wnpx jwdietrich mattjb franklin Ema MathBio Cybernetics ComplexAdaptiveSystems DSTO-CAS Biomedical_Cybernetics AQUA-FONTIS-Study
  • Statistical analysis of DNA sequences containing nucleosome positioning sites
    Biophysics, Vol. 51, No. 4. (2006), pp. 541-546.
    by Yu Orlov, V Levitskii, O Smirnova, O Podkolodnaya, T Khlebodarova, N Kolchanov
    posted to nucleosome_positioning nucleosomes by sameetmehta on 2007-12-02 11:25:49 as **
  • Genome-wide mapping and analysis of active promoters in mouse embryonic stem cells and adult organs
    Genome Res. (27 November 2007), gr.6654808.
    by Leah O Barrera, Zirong Li, Andrew D Smith, Karen C Arden, Webster K Cavenee, Michael Q Zhang, Roland D Green, Bing Ren
    posted to classification promoter promoters regulation transcription by sameetmehta on 2007-11-30 07:06:02 as ** along with 2 people inesdesantiago gracio
  • Genomic surgery for lung cancer.
    J Surg Res, Vol. 117, No. 1. (2004), pp. 107-13.
    by DS Schrump
    posted to genome-chromatin use therapygeneticstherapy regulation peptides neoplasticdrug neoplasmsdrug methylation lung humans histone genetic gene expression engineeringmethods effects dna disassemblydrug derivativespharmacologytherapeutic depsipeptides deacetylases cyclicpharmacologytherapeutic chromatin azacitidineanalogs assembly antineoplastic animals and agentspharmacologytherapeutic by sameetmehta on 2007-01-31 02:57:49 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • In vivo analysis of the model tyrosine aminotransferase gene reveals multiple sequential steps in glucocorticoid receptor action.
    Oncogene, Vol. 20, No. 24. (2001), pp. 3028-38.
    by T Grange, L Cappabianca, M Flavin, H Sassi, H Thomassin
    posted to genome-chromatin tyrosine transaminasegeneticsmetabolism trans-activation support research receptors non-us models humans govt glucocorticoidphysiology genetics chromatingeneticsmetabolism biological animals by sameetmehta on 2007-01-31 02:57:49 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.
    Mol Cell, Vol. 15, No. 4. (2004), pp. 595-605.
    by SA Sarraf, I Stancheva
    posted to macromolecular lysinemetabolism islands interferingmetabolism humans histonesmetabolism hela govt genetics gene factors dna-binding dna disassembly cpg chromatin cells carrier biological assembly and genome-chromatin two-hybrid transcription techniques system support substances small silencing s rna research replication regions proteinsmetabolism proteinsgeneticsmetabolism proteinsgenetics protein promoter phase non-us models methyltransferasesmetabolism methylation by sameetmehta on 2007-01-31 02:57:48 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • [How the methyl-CpG binding protein-related epigenetic disease turns on the genes that produce its symptoms]
    Tanpakushitsu Kakusan Koso, Vol. 50, No. 8. (2005), pp. 978-84.
    by S Horike
    posted to genome-chromatin transcription syndromegenetics rett repressor proteinsgenetics proteins protein non-histonegenetics mutation methyl-cpg-binding imprintinggenetics humans homeodomain histones genomic female factors dna-binding disassemblygenetics chromosomal chromatingenetics chromatin assembly animals and 2 by sameetmehta on 2007-01-31 02:57:47 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Genomic DNA methylation: the mark and its mediators.
    Trends Biochem Sci, Vol. 31, No. 2. (2006), pp. 89-97.
    by RJ Klose, AP Bird
    posted to genome-chromatin transcription syndromephysiopathology support silencingphysiology rett research regulation proteinsmetabolismphysiology protein non-us neoplasmsgenetics methylationdrug methyl-cpg-binding islandsphysiology intestinal humans govt geneticphysiology geneticdrug gene factorsphysiology expression epigenesis effectsphysiology effects dna-binding dna cytosine-5--methyltransferasemetabolism cpg animals 2genetics by sameetmehta on 2007-01-31 02:57:46 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Cooperative interactions between epigenetic modifications and their function in the regulation of chromosome architecture.
    Bioessays, Vol. 25, No. 8. (2003), pp. 792-7.
    by F Weissmann, F Lyko
    posted to genome-chromatin support research non-us models methylation humans govt genetic epigenesis dna chromosomesgenetics animals by sameetmehta on 2007-01-31 02:57:46 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Chromatin organization during spermiogenesis in Octopus vulgaris. I: Morphological structures.
    Mol Reprod Dev, Vol. 68, No. 2. (2004), pp. 223-31.
    by E Ribes, Gimenez P Bonafe, Martinez F Soler, A Gonzalez, N Saperas, HE Kasinsky, M Chiva
    posted to genome-chromatin support spermatogenesisphysiology research octopodiformesphysiology nuclear non-us matrixmetabolism male govt disassemblyphysiology chromatinphysiology chromatin assembly animals and by sameetmehta on 2007-01-31 02:57:45 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Biparental hydatidiform moles: a maternal effect mutation affecting imprinting in the offspring.
    Hum Reprod Update, Vol. 12, No. 3. (2006), pp. 233-42.
    by IB Van den Veyver, Al TK Hussaini
    posted to genome-chromatin uterine support research recessivegenetics pregnancy nih neoplasmsclassificationdiagnosisgenetics mutation moleclassificationdiagnosisgenetics methylation imprinting hydatidiform humans genomic genes female extramural dna complicationsgenetics chromatinmetabolism by sameetmehta on 2007-01-31 02:57:45 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • The marks, mechanisms and memory of epigenetic states in mammals.
    Biochem J, Vol. 356, No. Pt 1. (2001), pp. 1-10.
    by VK Rakyan, J Preis, HD Morgan, E Whitelaw
    posted to methylation mammalsgenetics intercellular imprinting govt genomic genetic gene expression dosage dna compensation chromatinmetabolism animals and genome-chromatin support signaling research repressor regulation proteins peptides non-us models mice by sameetmehta on 2007-01-31 02:57:44 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Gene targeting in plants: fingers on the move.
    Trends Plant Sci, Vol. 11, No. 4. (2006), pp. 159-61.
    by S Kumar, GC Allen, WF Thompson
    posted to genome-chromatin zinc us targetingmethods support research repair recombination plantsgenetics plant non-us non-phs govt genome genetic gene fingersphysiology endodeoxyribonucleaseschemistrymetabolism dna disassembly chromatin assembly and by sameetmehta on 2007-01-31 02:57:43 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Nucleosome assembly protein-1 is a linker histone chaperone in Xenopus eggs.
    Proc Natl Acad Sci U S A, Vol. 102, No. 23. (2005), pp. 8210-5.
    by K Shintomi, M Iwabuchi, H Saeki, K Ura, T Kishimoto, K Ohsumi
    posted to govt female extracts disassembly data cycle chromatin chaperonesmetabolism cell assembly animals and amino acid genome-chromatin xenopusmetabolism support spermatozoametabolism sequence research proteinsgeneticsmetabolism proteins oocytesmetabolism nucleosomeschemistrymetabolism nuclear non-us molecular male histonesmetabolism by sameetmehta on 2007-01-31 02:57:43 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Silencing of transposable elements in plants.
    Trends Plant Sci, Vol. 6, No. 11. (2001), pp. 527-34.
    by H Okamoto, H Hirochika
    posted to genome-chromatin transposable transcription support silencing rna research regulation processing post-transcriptional plantsgenetics plant non-us mammalsgenetics govt genetic gene expression elementsgenetics elegansgeneticsmetabolism drosophilagenetics dna deletion caenorhabditis arabidopsisgeneticsmetabolism animals by sameetmehta on 2007-01-31 02:57:43 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • The radioresistance kinase TLK1B protects the cells by promoting repair of double strand breaks.
    BMC Mol Biol, Vol. 6 (2005)
    by Sunavala G Dossabhoy, SK Balakrishnan, S Sen, S Nuthalapaty, A De Benedetti
    posted to genome-chromatin transfection tolerance support research repair radiation protein-serine-threonine plasmids phosphorylation non-us line kinasesgeneticsphysiology ionizing humans histonesmetabolism govt dna disassembly damage chromatin cell assembly animals and by sameetmehta on 2007-01-31 02:57:42 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • The chromatin remodelling complex FACT associates with actively transcribed regions of the Arabidopsis genome.
    Plant J, Vol. 40, No. 5. (2004), pp. 660-71.
    by M Duroux, A Houben, K Ruzicka, J Friml, KD Grasser
    posted to genome-chromatin transcription support research regulation proteinsmetabolism plant nucleusmetabolism non-us interphasephysiology govt genetic gene factorsmetabolism expression differentiation chromatinmetabolism cell arabidopsiscytologygeneticsmetabolism arabidopsis by sameetmehta on 2007-01-31 02:57:42 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Epigenetic marks at BRCA1 and p53 coding sequences in early human embryogenesis.
    Mol Hum Reprod, Vol. 8, No. 7. (2002), pp. 630-5.
    by F Magdinier, SG D'Estaing, C Peinado, B Demirci, C Berthet, JF Guerin, R Dante
    posted to genome-chromatin tumor suppressor support spermatozoametabolism research regulation protein p53genetics oocytesmetabolism non-us mice methylation male kinetics islandsgenetics humans govt genes gene fetal female expression embryonic dna developmentgenetics developmental cpg brca1 blastocystmetabolism animals and by sameetmehta on 2007-01-31 02:57:42 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Use of bifunctional cross-linking reagents in mapping genomic distribution of chromatin remodeling complexes.
    Methods, Vol. 33, No. 1. (2004), pp. 81-5.
    by N Fujita, PA Wade
    posted to genome-chromatin regions reagents promoter mappingmethods humans genomicsmethods genetics disassemblygeneticsphysiology cultured cross-linking chromosome chromatingeneticsphysiology chromatin cells assembly animals and by sameetmehta on 2007-01-31 02:57:41 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Solution structure of the SWIRM domain of human histone demethylase LSD1.
    Structure, Vol. 14, No. 3. (2006), pp. 457-68.
    by N Tochio, T Umehara, S Koshiba, M Inoue, T Yabuki, M Aoki, E Seki, S Watanabe, Y Tomo, M Hanada, M Ikari, M Sato, T Terada, T Nagase, O Ohara, M Shirouzu, A Tanaka, T Kigawa, S Yokoyama
    posted to specificity sequence research proteins protein oxidoreductases non-us n-demethylatingchemistrygenetics motifs molecular models histonesanalysismetabolism helix-turn-helix govt factorsanalysischemistry factors dna-binding disassembly data conformation chromatin assembly and amino acid genome-chromatin transcription time tertiary support substrate structure by sameetmehta on 2007-01-31 02:57:41 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • A heterochromatin barrier partitions the fission yeast centromere into discrete chromatin domains.
    Curr Biol, Vol. 16, No. 2. (2006), pp. 119-29.
    by KC Scott, SL Merrett, HF Willard
    posted to genome-chromatin transfer support site-directed silencing sequence segregationgeneticsphysiology schizosaccharomycescytologygeneticsgrowth rna research regulation non-us mutagenesis molecular meiosisphysiology heterochromatinchemistrygeneticsphysiology govt gene fungal expression disassembly development deletion data chromosome chromatin centromerechemistrygenetics base assembly and alagenetics by sameetmehta on 2007-01-31 02:57:40 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Functional genomic analysis of CAF-1 mutants in Arabidopsis thaliana.
    J Biol Chem, Vol. 281, No. 14. (2006), pp. 9560-8.
    by N Schonrock, V Exner, A Probst, W Gruissem, L Hennig
    posted to genome-chromatin transcription support silencing research proteinsbiosynthesisgenetics proteins profiling non-us non-histonebiosynthesisgenetics mutational molecular heterochromatinmetabolism govt genetic gene expression dna-binding dna disassemblygenetics chromosomal chromatin chaperones assembly arabidopsisgenetics and analysis by sameetmehta on 2007-01-31 02:57:39 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Promoter occupancy is a major determinant of chromatin remodeling enzyme requirements.
    Mol Cell Biol, Vol. 25, No. 7. (2005), pp. 2698-707.
    by A Dhasarathy, MP Kladde
    posted to genome-chromatin us transcription trans-activatorsmetabolism time support sites saccharomyces research regulation regions proteinsmetabolism proteinsgeneticsmetabolism protein promoter phs phosphatespharmacology nuclear non-us kinasesmetabolism immunoprecipitation histone govt geneticsgenetics gene fungal factorsmetabolism factors expression effectsenzymologygenetics dna-binding disassembly chromatingeneticsmetabolism chromatin cerevisiaedrug cerevisiae binding assembly and acetyltransferases by sameetmehta on 2007-01-31 02:57:38 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Estrogens and receptors: an evolving concept.
    Climacteric, Vol. 5 Suppl 2 (2002), pp. 20-6.
    by V Cavailles
    posted to dosagepharmacokinetics genome-chromatin therapy replacement regulation receptors pulse menopause humans gene female expression estrogensmetabolism estrogenmetabolism estrogen estradioladministration drug by sameetmehta on 2007-01-31 02:57:37 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • [Transcriptome and non-coding RNAs: so many mRNA-like non-coding RNAs are really functional?]
    Tanpakushitsu Kakusan Koso, Vol. 49, No. 16. (2004), pp. 2521-8.
    by A Kanai
    posted to genome-chromatin untranslatedclassificationgeneticsphysiology transcription sequence rna reading open messenger imprintinggenetics humans genomic geneticgenetics genetic frames dosage dna disassemblygenetics computational complementary compensation chromatin biology assembly antisense animals and analysis by sameetmehta on 2007-01-31 02:57:36 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Chromatin structure and epigenetics.
    Biochem Pharmacol (2006)
    by AS Quina, M Buschbeck, L Di Croce
    posted to genome-chromatin by sameetmehta on 2007-01-31 02:57:36 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Poly(ADP-ribosyl)ated chromatin domains: access granted.
    J Cell Sci, Vol. 117, No. Pt 6. (2004), pp. 815-25.
    by M Rouleau, RA Aubin, GG Poirier
    posted to genome-chromatin transcription support ribosemetabolism research proteins polymerases polyadp-ribose poly nucleusmetabolism nucleic non-us non-histonemetabolism nadmetabolism humans histonesmetabolism govt genetic dnametabolism disassemblyphysiology diphosphate conformation chromosomesmetabolism chromosomal chromatinmetabolism chromatin cell assembly apoptosisphysiology animals and adenosine acid by sameetmehta on 2007-01-31 02:57:35 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Transcriptional repression and heterochromatin formation by MBD1 and MCAF/AM family proteins.
    J Biol Chem, Vol. 280, No. 14. (2005), pp. 13928-35.
    by T Ichimura, S Watanabe, Y Sakamoto, T Aoto, N Fujita, M Nakao
    posted to genome-chromatin transcription support sp1 silencing sequence research repressor regulation recombinant proteinsgeneticsmetabolism protein non-us multiprotein multigene molecular mice methyltransferasesgeneticsmetabolism humans heterochromatinmetabolism hela govt genetic gene fusion family factorsgeneticsmetabolism factorgeneticsmetabolism expression epigenesis dna-binding disassembly data complexes chromatin cells assembly animals and amino alignment acid by sameetmehta on 2007-01-31 02:57:33 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair.
    Genes Dev, Vol. 19, No. 14. (2005), pp. 1656-61.
    by B Chai, J Huang, BR Cairns, BC Laurent
    posted to genome-chromatin us triphosphatemetabolism transcription temperature support saccharomyces research repair recombination proteinsgeneticsmetabolism phs nih mutation kinetics govt genetic genes fungal factorsgeneticsmetabolism extramural dna-binding dna disassembly chromatin cerevisiaegeneticsmetabolism cerevisiae assembly and adenosine by sameetmehta on 2007-01-31 02:57:33 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Role of transposable elements in heterochromatin and epigenetic control.
    Nature, Vol. 430, No. 6998. (2004), pp. 471-6.
    by Z Lippman, AV Gendrel, M Black, MW Vaughn, N Dedhia, WR Mccombie, K Lavine, V Mittal, B May, KD Kasschau, JC Carrington, RW Doerge, V Colot, R Martienssen
    posted to sequencesgenetics sequence rna research repeat regulation proteinsgeneticsmetabolism proteinsgenetics plantgenetics plant phs oligonucleotide non-us non-phs methylation interferinggeneticsmetabolism imprinting homeodomain heterochromatingenetics govt genomic geneticgenetics gene factorsgeneticsmetabolism expression epigenesis elementsgenetics dna-binding dna cytosine-5--methyltransferasemetabolism cluster chromosomes array arabidopsisgenetics arabidopsis analysis genome-chromatin us transposable transcription tandem support small by sameetmehta on 2007-01-31 02:57:31 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • DNA methylation in animal development.
    Semin Cell Dev Biol, Vol. 14, No. 1. (2003), pp. 53-65.
    by RR Meehan
    posted to genome-chromatin support research regulation proteinsphysiology non-us modification methylation methylasesgenetics imprinting govt genomic gene expression dna-binding dna developmentalgenetics chromatinmetabolismphysiology animals by sameetmehta on 2007-01-31 02:57:31 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Maternal control of seed development.
    Semin Cell Dev Biol, Vol. 12, No. 5. (2001), pp. 381-6.
    by AM Chaudhury, F Berger
    posted to genome-chromatin transcription silencingphysiology seedsembryologygeneticsphysiology regulation proteinsgeneticsphysiology proteins plant methylation imprintinggeneticsphysiology germ genomic gene fertilizationgeneticsphysiology factorsgeneticsphysiology expression dna developmentalgeneticsphysiology cellsphysiology arabidopsis by sameetmehta on 2007-01-31 02:57:31 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • Remodelling chromatin on a global scale: a novel protective function of p53.
    Carcinogenesis, Vol. 25, No. 9. (2004), pp. 1551-7.
    by SJ Allison, J Milner
    posted to genome-chromatin ultraviolet tumor transcription suppressor support research repairphysiology rays protein p53physiology non-us humans histonesmetabolism govt geneticradiation effects dnaphysiologyradiation dna damagegenetics chromatinphysiologyradiation by sameetmehta on 2007-01-31 02:57:30 as **** along with 2 groups Bioinformatics ProkaryoteInterestGroup
  • ATP-dependent chromatin-remodeling complexes in DNA double-strand break repair: remodeling, pairing and (re)pairing.
    Cell Cycle, Vol. 4, No. 12. (2005), pp. 1713-5.
    by J Huang, B Liang, J Qiu, BC Laurent
    posted to genome-chromatin triphosphatemetabolism support research repair pairing nih multiprotein extramural dna disassembly