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stajich mirna [26 articles]

Recent papers added to stajich library classified by the tag mirna. You can also see everyone's mirna.
  • The Evolution of the DLK1-DIO3 Imprinted Domain in Mammals
    PLoS Biology, Vol. 6, No. 6. (1 June 2008), e135.
    by Carol A Edwards, Andrew J Mungall, Lucy Matthews, Edward Ryder, Dionne J Gray, Andrew J Pask, Geoffrey Shaw, Jennifer A Graves, Jane Rogers, Ian Dunham, Marilyn B Renfree, Anne C Ferguson-Smith
    posted to mirna mammal imprinting by stajich on 2008-06-26 07:08:15 as ** along with 1 person and 1 group djkt Berkeley Mycology
  • MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen
    posted to regulatory_evolution regulation noncoding_rna mirna metazoan gene_expression by stajich on 2008-06-22 20:12:10 as ** along with 4 people and 2 groups bertelsen biozy imtechnology maralena Berkeley Mycology microRNA
  • Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome.
    Current biology : CB, Vol. 18, No. 10. (20 May 2008), pp. 758-762.
    by C Addo-Quaye, TW Eshoo, DP Bartel, MJ Axtell
    posted to solexa smallrna sirna sequencing mirna methods illumina bioinformatics by stajich on 2008-06-13 01:19:25 as ** along with 1 group Berkeley Mycology
  • Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends.
    Nature biotechnology (9 June 2008)
    by Marcelo A A German, Manoj Pillay, Dong-Hoon H Jeong, Amit Hetawal, Shujun Luo, Prakash Janardhanan, Vimal Kannan, Linda A A Rymarquis, Kan Nobuta, Rana German, Emanuele De Paoli, Cheng Lu, Gary Schroth, Blake C C Meyers, Pamela J J Green
    posted to solexa smallrna sequencing mirna methods htg bioinformatics by stajich on 2008-06-13 01:11:30 as ** along with 1 group Berkeley Mycology
  • An endogenous small interfering RNA pathway in Drosophila
    Nature (07 May 2008)
    by Benjamin Czech, Colin D Malone, Rui Zhou, Alexander Stark, Catherine Schlingeheyde, Monica Dus, Norbert Perrimon, Manolis Kellis, James A Wohlschlegel, Ravi Sachidanandam, Gregory J Hannon, Julius Brennecke
    posted to smallrna mirna methods drosophila by stajich on 2008-05-12 17:21:16 as ** along with 1 person and 1 group mtagaya Berkeley Mycology
  • Discovering microRNAs from deep sequencing data using miRDeep
    Nature Biotechnology, Vol. 26, No. 4., pp. 407-415.
    by Marc R Friedländer, Wei Chen, Catherine Adamidi, Jonas Maaskola, Ralf Einspanier, Signe Knespel, Nikolaus Rajewsky
    posted to smallrna mirna methods evolution by stajich on 2008-04-25 23:40:15 as ** along with 3 people and 1 group jfr tmmurali giovanni Berkeley Mycology
  • Adaptive Evolution of Newly Emerged Micro-RNA Genes in Drosophila
    Mol Biol Evol, Vol. 25, No. 5. (1 May 2008), pp. 929-938.
    by Jian Lu, Yonggui Fu, Supriya Kumar, Yang Shen, Kai Zeng, Anlong Xu, Richard Carthew, Chung-I Wu
    posted to smallrna mirna evolution drosophila by stajich on 2008-04-25 23:38:17 as ** along with 1 person and 1 group lp2 Berkeley Mycology
  • The birth and death of microRNA genes in Drosophila.
    Nat Genet (17 February 2008)
    by Jian Lu, Yang Shen, Qingfa Wu, Supriya Kumar, Bin He, Suhua Shi, Richard W W Carthew, San Ming M Wang, Chung-I I Wu
    posted to smallrna mirna methods evolution drosophila by stajich on 2008-04-25 23:38:05 as ** along with 5 people and 1 group djkt bootsy emptyhb cellison megraw Berkeley Mycology
  • Evolution of microRNAs and their targets: Are all microRNAs biologically relevant?
    Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. In Press, Uncorrected Proof
    by Michael J Axtell
    posted to smallrna mirna evolution by stajich on 2008-04-23 20:09:56 as ** along with 2 people and 1 group maralena eckart_bindewald Berkeley Mycology
  • Intronic microRNA precursors that bypass Drosha processing
    Nature (24 June 2007)
    by Graham J Ruby, Calvin H Jan, David P Bartel
    posted to intron mirna splicing by stajich on 2008-04-05 19:57:50 as ** along with 5 people and 4 groups ale dpollard gpalidwor andersbj Garamonfok Bioinformatics EisenLab microRNA Berkeley Mycology
  • Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    Genome Res. (7 November 2007), gr.6597907.
    by Graham J Ruby, Alexander Stark, Wendy K Johnston, Manolis Kellis, David P Bartel, Eric C Lai
    posted to drosophila mirna noncoding_rna sequencing by stajich on 2008-04-05 19:57:14 as ** along with 5 people and 2 groups lp2 cabbagezs heliopais urgi Alexander_Kanitz microRNA Berkeley Mycology
  • Most Caenorhabditis elegans microRNAs Are Individually Not Essential for Development or Viability
    PLoS Genetics, Vol. 3, No. 12. (1 December 2007), e215.
    by Eric A Miska, Ezequiel Alvarez-Saavedra, Allison L Abbott, Nelson C Lau, Andrew B Hellman, Shannon M Mcgonagle, David P Bartel, Victor R Ambros, Robert H Horvitz
    posted to caenorhabditis development mirna by stajich on 2008-04-05 19:56:03 as ** along with 3 people and 2 groups bootsy jfr heliopais microRNA Berkeley Mycology
  • A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
    Genes Dev., Vol. 22, No. 1. (1 January 2008), pp. 8-13.
    by Alexander Stark, Natascha Bushati, Calvin H Jan, Pouya Kheradpour, Emily Hodges, Julius Brennecke, David P Bartel, Stephen M Cohen, Manolis Kellis
    posted to comparative_genomics drosophila mirna noncoding_rna by stajich on 2008-04-05 19:55:44 as ** along with 4 people and 1 group sebastien_vigneau heliopais Alexander_Kanitz maralena Berkeley Mycology
  • The evolution of core proteins involved in microRNA biogenesis
    BMC Evolutionary Biology, Vol. 8 (25 March 2008), 92.
    by Dennis Murphy, Barry Dancis, James R Brown
    posted to biogenesis evolution mirna rnai rna_silencing by stajich on 2008-04-01 06:21:18 as ** along with 1 person and 1 group vinithepooh Berkeley Mycology
  • Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans.
    Cell, Vol. 127, No. 6. (15 December 2006), pp. 1193-1207.
    by JG Ruby, C Jan, C Player, MJ Axtell, W Lee, C Nusbaum, H Ge, DP Bartel
    posted to caenorhabditis mirna noncoding_rna by stajich on 2008-03-31 19:09:45 as ** along with 3 people and 2 groups tardigrade andersbj cellison microRNA Berkeley Mycology
  • Systematic discovery and characterization of fly microRNAs using 12 Drosophila genomes
    Genome Res. (7 November 2007), gr.6593807.
    by Alexander Stark, Pouya Kheradpour, Leopold Parts, Julius Brennecke, Emily Hodges, Gregory J Hannon, Manolis Kellis
    posted to comparative_genomics drosophila fly mirna prediction by stajich on 2008-03-11 00:31:16 as ** along with 4 people and 2 groups lp2 cabbagezs heliopais maralena microRNA Berkeley Mycology
  • MicroRNAs and the advent of vertebrate morphological complexity
    Proceedings of the National Academy of Sciences (14 February 2008), 0712259105.
    by Alysha M Heimberg, Lorenzo F Sempere, Vanessa N Moy, Philip C Donoghue, Kevin J Peterson
    posted to animal mirna multicellular by stajich on 2008-03-03 03:02:15 as ** along with 6 people and 2 groups maximilianh djkt heliopais maralena zhanglab prabhubpatil microRNA Berkeley Mycology
  • Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
    Genome Res. (19 February 2008), gr.7179508.
    by Ryan D Morin, Michael D O'Connor, Malachi Griffith, Florian Kuchenbauer, Allen Delaney, Anna-Liisa Prabhu, Yongjun Zhao, Helen Mcdonald, Thomas Zeng, Martin Hirst, Connie J Eaves, Marco A Marra
    posted to bioinformatics human mirna sequencing solexa by stajich on 2008-02-19 22:01:54 as ** along with 3 people and 1 group caseybrown jfr maralena Berkeley Mycology
  • MicroRNA-mediated regulation of stomatal development in Arabidopsis.
    Plant Cell, Vol. 19, No. 8. (August 2007), pp. 2417-2429.
    by C Kutter, H Schöb, M Stadler, F Meins, A Si-Ammour
    posted to arabidopsis development evodevo mirna plants by stajich on 2007-12-24 03:27:27 as ** along with 1 group Berkeley Mycology
  • A viral microRNA functions as an orthologue of cellular miR-155
    Nature, Vol. 450, No. 7172. (13 December 2007), pp. 1096-1099.
    by Eva Gottwein, Neelanjan Mukherjee, Christoph Sachse, Corina Frenzel, William H Majoros, Jen-Tsan A Chi, Ravi Braich, Muthiah Manoharan, Jurgen Soutschek, Uwe Ohler, Bryan R Cullen
    posted to human mirna virus by stajich on 2007-12-12 20:10:11 as ** along with 2 people and 1 group tmmurali damiantrj Berkeley Mycology
  • RNA world - the dark matter of evolutionary genomics
    Journal of Evolutionary Biology, Vol. 19, No. 6. (2006), pp. 1768-1774.
    by P Michalak
    posted to evolution mirna rna by stajich on 2007-09-26 14:30:54 as read along with 6 people and 5 groups dayjm marcius dchughes cdawson rabu chenlc03 G4ID BioinfoCIPF SGU-CIPF GIG Genetics-of-Gambling
  • MicroRNAs: unicellular organisms also have their share
    Nat Rev Genet, Vol. 8, No. 6. (June 2007), pp. 406-406.
    by Francesca Pentimalli
    posted to chlamy mirna multicellular by stajich on 2007-05-18 21:05:42 as read
  • Genomics of microRNA.
    Trends Genet (27 January 2006)
    by V Narry N Kim, Jin-Wu W Nam
    posted to mirna by stajich on 2007-02-11 23:39:12 as *** along with 9 people and 6 groups jo_davies marcius eckart_bindewald tardigrade andersbj dchughes mtagaya Garamonfok ale Bioinformatics microRNA G4ID BioinfoCIPF SGU-CIPF Genetics-of-Gambling
  • Secondary siRNAs Result from Unprimed RNA Synthesis and Form a Distinct Class
    Science, Vol. 315, No. 5809. (12 January 2007), pp. 244-247.
    by Titia Sijen, Florian A Steiner, Karen L Thijssen, Ronald H Plasterk
    posted to rnai rna_silencing mirna gene_silencing by stajich on 2007-02-09 07:10:06 as ** along with 1 person jyuh
  • A hexanucleotide element directs microRNA nuclear import.
    Science, Vol. 315, No. 5808. (5 January 2007), pp. 97-100.
    by HW Hwang, EA Wentzel, JT Mendell
    posted to rnai rna_silencing mirna by stajich on 2007-02-09 07:09:44 as ** along with 2 people and 2 groups andersbj cdawson microRNA GIG
  • Direct and sensitive miRNA profiling from low-input total RNA.
    RNA (14 November 2006)
    by Hui Wang, Robert A A Ach, Bo Curry
    posted to protocols mirna by stajich on 2007-01-31 06:14:57 as ** along with 5 people and 3 groups jyuh jfr tardigrade dchughes cdawson G4ID GIG Genetics-of-Gambling
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