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stajich noncoding_rna [18 articles]

Recent papers added to stajich library classified by the tag noncoding_rna. You can also see everyone's noncoding_rna.
  • Conserved Secondary Structures in Aspergillus
    PLoS ONE, Vol. 3, No. 7. (30 July 2008), e2812.
    by Abigail M Mcguire, James E Galagan
    posted to rna_gene noncoding_rna genome_evolution aspergillus by stajich on 2008-08-04 23:51:24 as ** along with 1 group Berkeley Mycology
  • Predicted functional RNAs within coding regions constrain evolutionary rates of yeast proteins.
    PLoS ONE, Vol. 3, No. 2. (2008)
    by CD Warden, SH Kim, SV Yi
    posted to saccharomyces rna noncoding_rna by stajich on 2008-07-21 05:56:32 as ** along with 1 group Berkeley Mycology
  • MicroRNA regulation of messenger-like noncoding RNAs: a network of mutual microRNA control
    Trends in Genetics, Vol. In Press, Corrected Proof
    by Yi Zhao, Shunmin He, Changning Liu, Songwei Ru, Haitao Zhao, Zhen Yang, Pengcheng Yang, Xiongyin Yuan, Shiwei Sun, Dongbo Bu, Jiefu Huang, Geir Skogerbø, Runsheng Chen
    posted to regulatory_evolution regulation noncoding_rna mirna metazoan gene_expression by stajich on 2008-06-22 20:12:10 as ** along with 5 people and 2 groups heliopais bertelsen biozy imtechnology maralena Berkeley Mycology microRNA
  • Life without RNase P
    Nature, Vol. 453, No. 7191., pp. 120-123.
    by Lennart Randau, Imke Schröder, Dieter Söll
    posted to rnasep noncoding_rna archea by stajich on 2008-05-01 02:25:51 as ** along with 4 people and 2 groups austin kinestetika zwang neils microbiology_nijmegen Berkeley Mycology
  • Common Functions for Diverse Small RNAs of Land Plants.
    Plant Cell (29 June 2007)
    by Michael J J Axtell, Jo Ann A Snyder, David P P Bartel
    posted to noncoding_rna plants smallrna by stajich on 2008-04-05 19:57:31 as ** along with 1 person and 2 groups andersbj microRNA Berkeley Mycology
  • Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
    Genome Res. (7 November 2007), gr.6597907.
    by Graham J Ruby, Alexander Stark, Wendy K Johnston, Manolis Kellis, David P Bartel, Eric C Lai
    posted to drosophila mirna noncoding_rna sequencing by stajich on 2008-04-05 19:57:14 as ** along with 5 people and 2 groups lp2 cabbagezs heliopais urgi Alexander_Kanitz microRNA Berkeley Mycology
  • A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands
    Genes Dev., Vol. 22, No. 1. (1 January 2008), pp. 8-13.
    by Alexander Stark, Natascha Bushati, Calvin H Jan, Pouya Kheradpour, Emily Hodges, Julius Brennecke, David P Bartel, Stephen M Cohen, Manolis Kellis
    posted to comparative_genomics drosophila mirna noncoding_rna by stajich on 2008-04-05 19:55:44 as ** along with 4 people and 1 group sebastien_vigneau heliopais Alexander_Kanitz maralena Berkeley Mycology
  • Strategies for measuring evolutionary conservation of RNA secondary structures
    BMC Bioinformatics, Vol. 9 (26 February 2008), 122.
    by Andreas R Gruber, Stefan H Bernhart, Ivo L Hofacker, Stefan Washietl
    posted to gene_finding noncoding noncoding_rna rna rna_gene by stajich on 2008-04-01 06:25:37 as ** along with 3 people and 1 group eckart_bindewald ilh gresillaud Berkeley Mycology
  • Small ncRNA transcriptome analysis from Aspergillus fumigatus suggests a novel mechanism for regulation of protein synthesis
    Nucl. Acids Res. (16 March 2008), gkn123.
    by Christoph Jochl, Mathieu Rederstorff, Jana Hertel, Peter F Stadler, Ivo L Hofacker, Markus Schrettl, Hubertus Haas, Alexander Huttenhofer
    posted to aspergillus fungi gene_silencing noncoding_rna transcriptional_regulation by stajich on 2008-04-01 00:55:01 as ** along with 1 person and 1 group cellison Berkeley Mycology
  • Large-Scale Sequencing Reveals 21U-RNAs and Additional MicroRNAs and Endogenous siRNAs in C. elegans.
    Cell, Vol. 127, No. 6. (15 December 2006), pp. 1193-1207.
    by JG Ruby, C Jan, C Player, MJ Axtell, W Lee, C Nusbaum, H Ge, DP Bartel
    posted to caenorhabditis mirna noncoding_rna by stajich on 2008-03-31 19:09:45 as ** along with 3 people and 2 groups tardigrade andersbj cellison microRNA Berkeley Mycology
  • Arabidopsis endogenous small RNAs: highways and byways.
    Trends Plant Sci (5 August 2006)
    by Franck Vazquez
    posted to biogenesis dicer noncoding_rna review smallrna by stajich on 2008-03-18 01:27:58 as ** along with 2 people and 2 groups tardigrade cdawson GIG Berkeley Mycology
  • Characterization of hypovirus-derived small RNAs generated in the chestnut blight fungus by an inducible DCL-2-dependent pathway.
    J Virol, Vol. 82, No. 6. (March 2008), pp. 2613-2619.
    by X Zhang, GC Segers, Q Sun, F Deng, DL Nuss
    posted to cryphonectria dicer mycovirus noncoding_rna rna_gene rnai rna_silencing by stajich on 2008-03-17 04:07:20 as ** along with 1 group Berkeley Mycology
  • Beyond Mfold: Recent advances in RNA bioinformatics.
    J Biotechnol (9 March 2006)
    by Jens Reeder, Matthias Höchsmann, Marc Rehmsmeier, Björn Voss, Robert Giegerich
    posted to analysis gene_prediction genome noncoding noncoding_rna rna rna_gene software by stajich on 2008-03-10 23:24:36 as read along with 12 people and 4 groups reyez marcius eckart_bindewald tardigrade andersbj arcticrasta mtagaya condon Hosna Eonwe cthachuk physics microRNA beta BioinfoCIPF SGU-CIPF
  • Comprehensive isolation of meiosis-specific genes identifies novel proteins and unusual non-coding transcripts in Schizosaccharomyces pombe.
    Nucleic Acids Res, Vol. 29, No. 11. (1 June 2001), pp. 2327-2337.
    by T Watanabe, K Miyashita, TT Saito, T Yoneki, Y Kakihara, K Nabeshima, YA Kishi, C Shimoda, H Nojima
    posted to development noncoding noncoding_rna pombe by stajich on 2008-03-10 04:28:17 as ** along with 1 group Berkeley Mycology
  • RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription
    Science (17 May 2007), 1138341.
    by Philipp Kapranov, Jill Cheng, Sujit Dike, David A Nix, Radharani Duttagupta, Aarron T Willingham, Peter F Stadler, Jana Hertel, Joerg Hackermueller, Ivo L Hofacker, Ian Bell, Evelyn Cheung, Jorg Drenkow, Erica Dumais, Sandeep Patel, Gregg Helt, Madhavan Ganesh, Srinka Ghosh, Antonio Piccolboni, Victor Sementchenko, Hari Tammana, Thomas R Gingeras
    posted to noncoding_rna rna transcription by stajich on 2007-07-09 18:18:56 as ** along with 11 people and 4 groups xingxu marcius alexg dpollard xico mtagaya rdiaz djkt mathijsv asddd elfar EisenLab WetBiology BioinfoCIPF SGU-CIPF
  • Identification of novel non-coding RNAs as potential antisense regulators in the archaeon Sulfolobus solfataricus
    Molecular Microbiology, Vol. 55, No. 2., 469.
    by Thean-Hock Tang, Norbert Polacek, Marek Zywicki, Harald Huber, Kim Brugger, Roger Garrett, Jean P Bachellerie, Alexander Huttenhofer
    posted to antisense microbiology noncoding_rna by stajich on 2007-07-08 23:57:31 as **
  • Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering
    PLoS Computational Biology, Vol. 3, No. 4. (1 April 2007), e65.
    by Sebastian Will, Kristin Reiche, Ivo L Hofacker, Peter F Stadler, Rolf Backofen
    posted to noncoding_rna software by stajich on 2007-04-19 22:04:59 as *** along with 5 people and 2 groups indigoviolet andersbj mtagaya zwang jayster4 EisenLab microRNA
  • Identification of a large noncoding RNA in extremophilic eubacteria.
    Proc Natl Acad Sci U S A (12 December 2006)
    by Elena Puerta-Fernandez, Jeffrey E E Barrick, Adam Roth, Ronald R R Breaker
    posted to noncoding_rna bacteria by stajich on 2007-02-02 07:23:03 as *** along with 1 person eckart_bindewald
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