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tabu Список просмотра [1000+ articles]

Недавние статьи, tabu которые соответствуют критериям списка просмотра
  • The politics of transcription
    Journal of Pragmatics, Vol. 32, No. 10. (September 2000), pp. 1439-1465.
    by Mary Bucholtz
    posted to transcription representation reflexive power media legal language discourse analysis by kaniko on 2008-08-21 14:08:43 as **
  • Reduced representation bisulfite sequencing for comparative high-resolution DNA methylation analysis
    Nucleic Acids Research, Vol. 33, No. 18. (2005), pp. 5868-5877.
    by Alexander Meissner, Andreas Gnirke, George W Bell, Bernard Ramsahoye, Eric S Lander, Rudolf Jaenisch
    posted to methylation methods epigenome epigenetics by epigenetics on 2008-08-21 13:36:30 as *****
  • Systems analysis of quantitative shRNA-library screens identifies regulators of cell adhesion.
    BMC systems biology, Vol. 2 (2008)
    by X Huang, JY Wang, X Lu
    posted to systems-biology rnai cell-adhesion by jyuh on 2008-08-21 09:41:40 as **
  • Discovery of novel targets with high throughput RNA interference screening.
    Combinatorial chemistry & high throughput screening, Vol. 11, No. 3. (March 2008), pp. 175-184.
    by PD Kassner
    posted to rnai hts drug by jyuh on 2008-08-21 09:39:26 as **
  • High throughput screening of gene functions in mammalian cells using reversely transfected cell arrays: review and protocol.
    Combinatorial chemistry & high throughput screening, Vol. 11, No. 2. (February 2008), pp. 159-172.
    by M Stürzl, A Konrad, G Sander, E Wies, F Neipel, E Naschberger, S Reipschläger, N Gonin-Laurent, RE Horch, U Kneser, W Hohenberger, H Erfle, M Thurau
    posted to rnai hts cell-array by jyuh on 2008-08-21 09:37:26 as **
  • NCBI GEO: mining tens of millions of expression profilesdatabase and tools update
    Nucleic Acids Research, Vol. 35, No. Supplement 1. (January 2007), pp. D760-D765.
    by Barrett, Tanya, Troup, B Dennis, Wilhite, E Stephen, Ledoux, Pierre, Rudnev, Dmitry, Evangelista, Carlos, Kim, F Irene, Soboleva, Alexandra, Tomashevsky, Maxim, Edgar, Ron
    posted to microarray datasets by minostro on 2008-08-20 23:39:20 as ** along with 1 person giovenko
  • Silencing the major apple allergen Mal d 1 by using the RNA interference approach
    Journal of Allergy and Clinical Immunology, Vol. 115, No. 2. (February 2005), pp. 364-369.
    by Luud J Gilissen, Suzanne T Bolhaar, Catarina I Matos, Gerard J Rouwendal, Marjan J Boone, Frans A Krens, Laurian Zuidmeer, Astrid van Leeuwen, Jaap Akkerdaas, Karin Hoffmann-Sommergruber, André C Knulst, Dirk Bosch, Eric W van de Weg, Ronald van Ree
    posted to rnai apple allergen by rs on 2008-08-20 08:02:12 as read
  • Biological regulation by antisense RNA in prokaryotes.
    Annual review of genetics, Vol. 22 (1988), pp. 567-600.
    by RW Simons, N Kleckner
    posted to rna review antisense by austin on 2008-08-20 04:00:38 as read
  • A comprehensive evaluation of SAM, the SAM R-package and a simple modification to improve its performance
    BMC Bioinformatics, Vol. 8 (29 June 2007), 230.
    by Shunpu Zhang
    posted to sam microarray by renatomilani on 2008-08-20 00:53:27 as ** along with 5 people jfr gpalidwor shigepong ghattem GeeSharpMinor
  • FACT--a framework for the functional interpretation of high-throughput experiments.
    BMC Bioinformatics, Vol. 6 (2005)
    by F Kokocinski, N Delhomme, G Wrobel, L Hummerich, G Toedt, P Lichter
    posted to microarray by renatomilani on 2008-08-20 00:51:13 as ** along with 1 person flexer
  • goCluster integrates statistical analysis and functional interpretation of microarray expression data.
    Bioinformatics (Oxford, England), Vol. 21, No. 17. (1 September 2005), pp. 3575-3577.
    by G Wrobel, F Chalmel, M Primig
    posted to microarray by renatomilani on 2008-08-20 00:51:01 as **
  • Integration of statistical inference methods and a novel control measure to improve sensitivity and specificity of data analysis in expression profiling studies.
    J Biomed Inform, Vol. 40, No. 5. (October 2007), pp. 552-560.
    by S Zang, R Guo, L Zhang, Y Lu
    posted to sam microarray by renatomilani on 2008-08-20 00:50:15 as ** along with 2 people jyuh jfr
  • Significance analysis of microarrays applied to the ionizing radiation response.
    Proc Natl Acad Sci U S A, Vol. 98, No. 9. (24 April 2001), pp. 5116-5121.
    by VG Tusher, R Tibshirani, G Chu
    posted to sam microarray by renatomilani on 2008-08-20 00:48:51 as ** along with 9 people askrajiv miguel jen_drake gpalidwor olympos ccr incovoma ugengma shikin
  • Considerations when using the significance analysis of microarrays (SAM) algorithm.
    BMC Bioinformatics, Vol. 6 (2005)
    by O Larsson, C Wahlestedt, JA Timmons
    posted to sam microarray by renatomilani on 2008-08-20 00:48:04 as ** along with 1 person incovoma
  • Estimating p-values in small microarray experiments.
    Bioinformatics, Vol. 23, No. 1. (1 January 2007), pp. 38-43.
    by H Yang, G Churchill
    posted to sam microarray by renatomilani on 2008-08-20 00:43:02 as ** along with 2 people jyuh shikin
  • Evaluating test statistics to select interesting genes in microarray experiments.
    Hum Mol Genet, Vol. 11, No. 19. (15 September 2002), pp. 2223-2232.
    by C Kooperberg, S Sipione, M LeBlanc, AD Strand, E Cattaneo, JM Olson
    posted to sam microarray by renatomilani on 2008-08-20 00:41:23 as ** along with 1 person textoris
  • A comparative study of different machine learning methods on microarray gene expression data
    BMC Genomics, Vol. 9, No. Suppl 1. (2008)
    by Mehdi Pirooznia, Jack Yang, Mary Q Yang, Youping Deng
    posted to microarray by renatomilani on 2008-08-20 00:40:26 as **
  • A Unified Framework for Finding Differentially Expressed Genes from Microarray Experiments
    BMC Bioinformatics, Vol. 8 (18 September 2007), 347.
    by Jahangheer S Shaik, Mohammed Yeasin
    posted to sam microarray by renatomilani on 2008-08-20 00:39:23 as ** along with 1 person jyuh
  • Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data
    BMC Bioinformatics, Vol. 7 (26 July 2006), 359.
    by Ian B Jeffery, Desmond G Higgins, Aedin C Culhane
    posted to sam microarray by renatomilani on 2008-08-20 00:39:03 as ** along with 4 people jfr mayercd shikin bakakaj
  • Clustering and re-clustering for pattern discovery in gene expression data.
    Journal of bioinformatics and computational biology, Vol. 3, No. 2. (April 2005), pp. 281-301.
    by PC Ma, KC Chan, DK Chiu
    posted to sam microarray by renatomilani on 2008-08-20 00:37:07 as **
  • Improving gene set analysis of microarray data by SAM-GS
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Irina Dinu, John Potter, Thomas Mueller, Qi Liu, Adeniyi Adewale, Gian Jhangri, Gunilla Einecke, Konrad Famulski, Philip Halloran, Yutaka Yasui
    posted to sam microarray by renatomilani on 2008-08-20 00:34:43 as ** along with 8 people and 1 group heliopais jfr ealloza shigepong ghattem GeeSharpMinor waghsk LuigiAugugliaro BioinfoCIPF
  • Epigenotypes of latent herpesvirus genomes.
    Current topics in microbiology and immunology, Vol. 310 (2006), pp. 61-80.
    by J Minarovits
    posted to review methylation herpesvirus by Pezda on 2008-08-19 21:23:51 as read
  • Work Flow for Multiplexing siRNA Assays by Solid-Phase Reverse Transfection in Multiwell Plates.
    Journal of biomolecular screening : the official journal of the Society for Biomolecular Screening (3 July 2008)
    by Holger Erfle, Rainer Pepperkok, Jan Ellenberg, Jutta Bulkescher, Beate Neumann, Phill Rogers
    posted to rnai cell-array by jyuh on 2008-08-19 09:35:35 as **
  • RNA interference screen for human genes associated with West Nile virus infection
    Nature (06 August 2008)
    by Manoj N Krishnan, Aylwin Ng, Bindu Sukumaran, Felicia D Gilfoy, Pradeep D Uchil, Hameeda Sultana, Abraham L Brass, Rachel Adametz, Melody Tsui, Feng Qian, Ruth R Montgomery, Sima Lev, Peter W Mason, Raymond A Koski, Stephen J Elledge, Ramnik J Xavier, Herve Agaisse, Erol Fikrig
    posted to wnv screen rnai by shuzhens on 2008-08-18 17:35:47 as ***** along with 1 person tmmurali
  • Regulation of DNA methylation activity through Dnmt3L promoter methylation by Dnmt3 enzymes in embryonic development
    Hum. Mol. Genet., Vol. 17, No. 17. (1 September 2008), pp. 2654-2664.
    by Ye-Guang Hu, Ryutaro Hirasawa, Jia-Lei Hu, Kenichiro Hata, Chun-Liang Li, Ying Jin, Taiping Chen, En Li, Muriel Rigolet, Evani Viegas-Pequignot, Hiroyuki Sasaki, Guo-Liang Xu
    posted to regulation methylation dnmt3l dnmt3b by clearbluespring on 2008-08-18 14:37:46 as **
  • SOAP: short oligonucleotide alignment program.
    Bioinformatics (28 January 2008)
    by Ruiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang
    posted to microarray alignment by waszak on 2008-08-18 14:35:44 as ** along with 8 people bozdagd urgi caseybrown jyuh ghattem GustavoLacerda niallhaslam mdimon
  • Ripples from neighbouring transcription.
    Nature cell biology (10 August 2008)
    by Miki Ebisuya, Takuya Yamamoto, May Nakajima, Eisuke Nishida
    posted to transcription neighbouring by idonaldson on 2008-08-18 14:28:06 as **
  • MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.
    Genome Biol, Vol. 4, No. 1. (2003)
    by SW Doniger, N Salomonis, KD Dahlquist, K Vranizan, SC Lawlor, BR Conklin
    posted to microarray by talponer on 2008-08-18 14:18:12 as ** along with 3 people and 1 group AlexanderPico dragonrez heliopais ConklinLab
  • A comparison of background correctionm ethods for two-colour microarrays.
    Bioinformatics (25 August 2007)
    by Matthew E E Ritchie, Jeremy Silver, Alicia Oshlack, Melissa Holmes, Dileepa Diyagama, Andrew Holloway, Gordon K K Smyth
    posted to microarray correction background by Stew on 2008-08-18 09:39:05 as ** along with 6 people debasis caseybrown jyuh jfr shigepong GeeSharpMinor
  • Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells
    Cell, Vol. 134, No. 3. (8 August 2008), pp. 521-533.
    by Alexander Marson, Stuart S Levine, Megan F Cole, Garrett M Frampton, Tobias Brambrink, Sarah Johnstone, Matthew G Guenther, Wendy K Johnston, Marius Wernig, Jamie Newman, Mauro J Calabrese, Lucas M Dennis, Thomas L Volkert, Sumeet Gupta, Jennifer Love, Nancy Hannett, Phillip A Sharp, David P Bartel, Rudolf Jaenisch, Richard A Young
    posted to transcription stemcell regulation microrna by maralena on 2008-08-18 08:35:02 as ** along with 1 person pengchy
  • Antagonism between DNA and H3K27 Methylation at the Imprinted Rasgrf1 Locus
    PLoS Genet, Vol. 4, No. 8. (2008), e1000145.
    by Anders M Lindroth, Yoon J Park, Chelsea M Mclean, Gregoriy A Dokshin, Jenna M Persson, Herry Herman, Diego Pasini, Xavier Miró, Mary E Donohoe, Jeannie T Lee, Kristian Helin, Paul D Soloway
    posted to methylation histone dna antagonism by clearbluespring on 2008-08-17 16:18:11 as **
  • xMAN: extreme MApping of OligoNucleotides
    BMC Genomics, Vol. 9, No. Suppl 1. (2008)
    by Wei Li, Jason Carroll, Myles Brown, Shirley X Liu
    posted to python microarray algorithm by waszak on 2008-08-16 18:50:45 as ** along with 1 person GeeSharpMinor
  • A Global View of Gene Activity and Alternative Splicing by Deep Sequencing of the Human Transcriptome
    Science (3 July 2008), 1160342.
    by Marc Sultan, Marcel H Schulz, Hugues Richard, Alon Magen, Andreas Klingenhoff, Matthias Scherf, Martin Seifert, Tatjana Borodina, Aleksey Soldatov, Dmitri Parkhomchuk, Dominic Schmidt, Sean O'Keeffe, Stefan Haas, Martin Vingron, Hans Lehrach, Marie-Laure Yaspo
    posted to transcription sequence gene by zwang on 2008-08-16 07:32:25 as ** along with 10 people and 1 group ArtemPankin djkt Ema kjglennie balicea GeeSharpMinor dh0000 caseybrown reyez oelemento Khavkin's lab
  • RNA interference: an emerging generation of biologicals.
    Biotechnology journal, Vol. 3, No. 3. (March 2008), pp. 339-353.
    by N Shrivastava, A Srivastava
    posted to rnai by jyuh on 2008-08-16 05:48:34 as **
  • RNAi mechanisms and applications.
    BioTechniques, Vol. 44, No. 5. (April 2008), pp. 613-616.
    by D Kim, J Rossi
    posted to rnai by jyuh on 2008-08-16 05:48:22 as **
  • Hit selection with false discovery rate control in genome-scale RNAi screens.
    Nucleic acids research, Vol. 36, No. 14. (August 2008), pp. 4667-4679.
    by XD Zhang, PF Kuan, M Ferrer, X Shu, YC Liu, AT Gates, P Kunapuli, EM Stec, M Xu, SD Marine, DJ Holder, B Strulovici, JF Heyse, AS Espeseth
    posted to rnai hts fdr by jyuh on 2008-08-16 05:05:28 as **
  • Identification of JAK/STAT pathway regulators-Insights from RNAi screens.
    Seminars in cell & developmental biology (8 June 2008)
    by Patrick Müller, Michael Boutros, Martin P P Zeidler
    posted to stat rnai by jyuh on 2008-08-16 04:58:27 as **
  • Lessons from genetics: interpreting complex phenotypes in RNAi screens.
    Current opinion in cell biology, Vol. 20, No. 4. (August 2008), pp. 483-489.
    by R Sacher, L Stergiou, L Pelkmans
    posted to rnai phenotype by jyuh on 2008-08-16 04:39:39 as **
  • Small interfering RNA-induced transcriptional gene silencing in human cells.
    Science (New York, N.Y.), Vol. 305, No. 5688. (27 August 2004), pp. 1289-1292.
    by KV Morris, SW Chan, SE Jacobsen, DJ Looney
    posted to sirna rnai by mtagaya on 2008-08-16 01:33:16 as **
  • Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
    Nucleic Acids Research, Vol. 33, No. 20. (2005), pp. e175-e175.
    by Manhong Dai, Pinglang Wang, Andrew D Boyd, Georgi Kostov, Brian Athey, Edward G Jones, William E Bunney, Richard M Myers, Terry P Speed, Huda Akil, Stanley J Watson, Fan Meng
    posted to microarray genechip affymetrix by waszak on 2008-08-16 01:09:07 as ** along with 8 people and 2 groups shikin bertelsen pcahan1 frohike incovoma nicholso heliopais Montrachet GeneGo Bioinformatics
  • Selective Constraints in Experimentally Defined Primate Regulatory Regions
    PLoS Genet, Vol. 4, No. 8. (2008), e1000157.
    by Daniel J Gaffney, Ran Blekhman, Jacek Majewski
    posted to tf primates expression evolution conservation chip-chip annotation by djkt on 2008-08-15 17:24:04 as read along with 6 people and 2 groups cisevol maximilianh caseybrown pradiptaray aprasad bpcusack cis-regulatory-evolution BergmanLab
  • SeqMap : mapping massive amount of oligonucleotides to the genome
    Bioinformatics (12 August 2008), btn429.
    by Hui Jiang, Wing H Wong
    posted to microarray alignment by waszak on 2008-08-15 15:31:51 as ** along with 1 person GeeSharpMinor
  • RNA interference: Hitting the on switch
    Nature, Vol. 448, No. 7156. (22 August 2007), pp. 855-858.
    by Erika Check
    posted to rnai rnaa by mtagaya on 2008-08-15 03:09:42 as ** along with 2 people jyuh cabbagezs
  • Genistein induces the p21WAF1/CIP1 and p16INK4a tumor suppressor genes in prostate cancer cells by epigenetic mechanisms involving active chromatin modification.
    Cancer research, Vol. 68, No. 8. (15 April 2008), pp. 2736-2744.
    by S Majid, N Kikuno, J Nelles, E Noonan, Y Tanaka, K Kawamoto, H Hirata, LC Li, H Zhao, ST Okino, RF Place, D Pookot, R Dahiya
    posted to small-molecule methylation metabolite histone flavonoid epigenetics chromatin by kengg on 2008-08-15 01:27:23 as ** along with 1 person mtagaya
  • Methylation of mercury from dental amalgam and mercuric chloride by oral streptococci in vitro
    European Journal of Oral Sciences, Vol. 91, No. 2. (1983), pp. 150-152.
    by ULF Heintze, STIG Edwardsson, TORE Dérand, Dowen Birkhed
    posted to methylation mercury amalgam by darioacha on 2008-08-14 21:33:49 as **
  • MED25 is distinct from TRAP220/MED1 in cooperating with CBP for retinoid receptor activation
    The EMBO Journal, Vol. aop, No. current. (19 July 2007)
    by Hye-Kyung Lee, Ui-Hyun Park, Eun-Joo Kim, Soo-Jong Um
    posted to transcription rarrxr med25 med1 lxxll cbp by mapplab on 2008-08-14 21:04:39 as ** along with 1 person amwands
  • Peptides Selected to Bind the Gal80 Repressor Are Potent Transcriptional Activation Domains in Yeast
    J. Biol. Chem., Vol. 275, No. 20. (12 May 2000), pp. 14979-14984.
    by Ying Han, Thomas Kodadek
    posted to yeast transcription repressor peptides gal80 by mapplab on 2008-08-14 20:58:22 as ** along with 1 person amwands
  • Mediator-Dependent Recruitment of TFIIH Modules in Preinitiation Complex
    Molecular Cell, Vol. 31, No. 3. (8 August 2008), pp. 337-346.
    by Cyril Esnault, Yad Ghavi-Helm, Sylvain Brun, Julie Soutourina, Nynke Van Berkum, Claire Boschiero, Frank Holstege, Michel Werner
    posted to transcription tfiih rad3 mediator med22 med17 med11 by mapplab on 2008-08-14 20:31:14 as **
  • GATA transcription factors directly regulate the Parkinson's disease-linked gene α-synuclein
    Proceedings of the National Academy of Sciences, Vol. 105, No. 31. (2008), pp. 10907-10912.
    by Clemens R Scherzer, Jeffrey A Grass, Zhixiang Liao, Imelda Pepivani, Bin Zheng, Aron C Eklund, Paul A Ney, Juliana Ng, Meghan Mcgoldrick, Brit Mollenhauer, Emery H Bresnick, Michael G Schlossmacher
    posted to transcription parkinsons-disease journalclub gata er-gata-construct by mapplab on 2008-08-14 20:27:40 as **
  • FLASH acts as a co-activator of the transcription factor c-Myb and localizes to active RNA polymerase II foci
    Oncogene, Vol. aop, No. current.
    by AH Alm-Kristiansen, T Sæther, V Matre, S Gilfillan, Dahle, OS Gabrielsen
    posted to transcription rna-polii journalclub immunochemistry flash c-myb cajal-bodies by mapplab on 2008-08-14 20:18:38 as **
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