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tpreeprem library [23 articles]

Статьи, недавно добавленные в библиотеку tpreeprem .
  • Characterization of ST-4821 complex, a unique Neisseria meningitidis clone.
    Genomics, Vol. 91, No. 1. (January 2008), pp. 78-87.
    by J Peng, L Yang, F Yang, J Yang, Y Yan, H Nie, X Zhang, Z Xiong, Y Jiang, F Cheng, X Xu, S Chen, L Sun, W Li, Y Shen, Z Shao, X Liang, J Xu, Q Jin
    posted to meningitidis by tpreeprem on 2008-01-28 21:10:13 as ***** along with 1 group gatech-compgenomics
  • The history of pyrosequencing.
    Methods Mol Biol, Vol. 373 (2007), pp. 1-14.
    by P Nyrén
    posted to pyrosequencing by tpreeprem on 2008-01-28 06:49:47 as **
  • A sequencing method based on real-time pyrophosphate.
    Science, Vol. 281, No. 5375. (17 July 1998)
    by M Ronaghi, M Uhlén, P Nyrén
    posted to pyrosequencing by tpreeprem on 2008-01-28 06:43:21 as ** along with 1 person and 1 group kieran101 gatech-compgenomics
  • Improved performance of pyrosequencing using single-stranded DNA-binding protein.
    Anal Biochem, Vol. 286, No. 2. (15 November 2000), pp. 282-288.
    by M Ronaghi
    posted to pyrosequencing by tpreeprem on 2008-01-28 06:36:15 as *** along with 1 group gatech-compgenomics
  • Pyrosequencing sheds light on DNA sequencing.
    Genome Res, Vol. 11, No. 1. (January 2001), pp. 3-11.
    by M Ronaghi
    posted to pyrosequencing by tpreeprem on 2008-01-28 06:32:44 as *** along with 4 people and 1 group balicea darioacha kieran101 mariakmejia gatech-compgenomics
  • Genome sequencing in microfabricated high-density picolitre reactors
    Nature (31 July 2005)
    by Marcel Margulies, Michael Egholm, William E Altman, Said Attiya, Joel S Bader, Lisa A Bemben, Jan Berka, Michael S Braverman, Yi-Ju Chen, Zhoutao Chen, Scott B Dewell, Lei Du, Joseph M Fierro, Xavier V Gomes, Brian C Godwin, Wen He, Scott Helgesen, Chun H Ho, Gerard P Irzyk, Szilveszter C Jando, Maria LI Alenquer, Thomas P Jarvie, Kshama B Jirage, Jong-Bum Kim, James R Knight, Janna R Lanza, John H Leamon, Steven M Lefkowitz, Ming Lei, Jing Li, Kenton L Lohman, Hong Lu, Vinod B Makhijani, Keith E Mcdade, Michael P Mckenna, Eugene W Myers, Elizabeth Nickerson, John R Nobile, Ramona Plant, Bernard P Puc, Michael T Ronan, George T Roth, Gary J Sarkis, Jan F Simons, John W Simpson, Maithreyan Srinivasan, Karrie R Tartaro, Alexander Tomasz, Kari A Vogt, Greg A Volkmer, Shally H Wang, Yong Wang, Michael P Weiner, Pengguang Yu, Richard F Begley, Jonathan M Rothberg
    posted to 454 by tpreeprem on 2008-01-26 21:17:47 as *** along with 23 people and 5 groups jlgreen kieran101 GustavoLacerda farhat mcox bpb carpi bjorns dayjm jmeppley arve RMGraze JAShapiro balajis cdawson AaronDarling treangen usagi-kirin azazello beatrizfernandez wenhan xingxu erbon iSEEM Green Lab Microbial-Ecology GIG gatech-compgenomics
  • The Genome Assembly Archive: A New Public Resource
    PLoS Biology, Vol. 2, No. 9. (1 September 2004), e285.
    by Steven L Salzberg, Deanna Church, Michael Dicuccio, Eugene Yaschenko, James Ostell
    posted to assembly software by tpreeprem on 2008-01-25 20:45:51 as ** along with 1 person and 1 group GustavoLacerda gatech-compgenomics
  • Comparative genome assembly.
    Brief Bioinform, Vol. 5, No. 3. (September 2004), pp. 237-248.
    by M Pop, A Phillippy, AL Delcher, SL Salzberg
    posted to assembly comparasion by tpreeprem on 2008-01-22 06:54:31 as *** along with 7 people and 2 groups Ema Neeperando mariakmejia treangen azazello wenhan urgi MBLAB gatech-compgenomics
  • A whole-genome assembly of Drosophila.
    Science, Vol. 287, No. 5461. (24 March 2000), pp. 2196-2204.
    by EW Myers, GG Sutton, AL Delcher, IM Dew, DP Fasulo, MJ Flanigan, SA Kravitz, CM Mobarry, KH Reinert, KA Remington, EL Anson, RA Bolanos, HH Chou, CM Jordan, AL Halpern, S Lonardi, EM Beasley, RC Brandon, L Chen, PJ Dunn, Z Lai, Y Liang, DR Nusskern, M Zhan, Q Zhang, X Zheng, GM Rubin, MD Adams, JC Venter
    posted to assembly by tpreeprem on 2008-01-17 01:45:30 as ** along with 4 people and 2 groups bluto azazello wenhan yoanjacquemin MBLAB gatech-compgenomics
  • The greedy path-merging algorithm for contig scaffolding
    J. ACM, Vol. 49, No. 5. (September 2002), pp. 603-615.
    by Daniel H Huson, Knut Reinert, Eugene W Myers
    posted to algorithm by tpreeprem on 2008-01-17 01:41:30 as ** along with 1 person and 1 group azazello gatech-compgenomics
  • The greedy path-merging algorithm for sequence assembly
    (2001), pp. 157-163.
    by Daniel H Huson, Knut Reinert, Eugene Myers
    posted to algorithm by tpreeprem on 2008-01-17 01:36:38 as ** along with 1 group gatech-compgenomics
  • Genome Sequence Assembly: Algorithms and Issues
    posted to algorithm by tpreeprem on 2008-01-17 01:32:53 as ** along with 1 person and 1 group vineith gatech-compgenomics
  • Comparative genomics of Neisseria meningitidis: core genome, islands of horizontal transfer and pathogen-specific genes.
    Microbiology, Vol. 152, No. Pt 12. (December 2006), pp. 3733-3749.
    by JC Hotopp, R Grifantini, N Kumar, YL Tzeng, D Fouts, E Frigimelica, M Draghi, MM Giuliani, R Rappuoli, DS Stephens, G Grandi, H Tettelin
    posted to functional meningitidis by tpreeprem on 2008-01-16 05:26:26 as ** along with 1 person and 1 group treangen gatech-compgenomics
  • Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58
    Science, Vol. 287, No. 5459. (10 March 2000), pp. 1809-1815.
    by Hervé Tettelin, Nigel J Saunders, John Heidelberg, Alex C Jeffries, Karen E Nelson, Jonathan A Eisen, Karen A Ketchum, Derek W Hood, John F Peden, Robert J Dodson, William C Nelson, Michelle L Gwinn, Robert Deboy, Jeremy D Peterson, Erin K Hickey, Daniel H Haft, Steven L Salzberg, Owen White, Robert D Fleischmann, Brian A Dougherty, Tanya Mason, Anne Ciecko, Debbie S Parksey, Eric Blair, Henry Cittone, Emily B Clark, Matthew D Cotton, Terry R Utterback, Hoda Khouri, Haiying Qin, Jessica Vamathevan, John Gill, Vincenzo Scarlato, Vega Masignani, Mariagrazia Pizza, Guido Grandi, Li Sun, Hamilton O Smith, Claire M Fraser, Richard E Moxon, Rino Rappuoli, Craig J Venter
    posted to meningitidis sequence by tpreeprem on 2008-01-16 04:37:08 as ***** along with 2 people and 1 group treangen karenidwilson gatech-compgenomics
  • Meningococcal genetic variation mechanisms viewed through comparative analysis of serogroup C strain FAM18.
    PLoS Genet, Vol. 3, No. 2. (16 February 2007)
    by SD Bentley, GS Vernikos, LA Snyder, C Churcher, C Arrowsmith, T Chillingworth, A Cronin, PH Davis, NE Holroyd, K Jagels, M Maddison, S Moule, E Rabbinowitsch, S Sharp, L Unwin, S Whitehead, MA Quail, M Achtman, B Barrell, NJ Saunders, J Parkhill
    posted to meningitidis sequence by tpreeprem on 2008-01-16 04:21:13 as ***** along with 1 group gatech-compgenomics
  • Complete DNA sequence of a serogroup A strain of Neisseria meningitidis Z2491.
    Nature, Vol. 404, No. 6777. (30 March 2000), pp. 502-506.
    by J Parkhill, M Achtman, KD James, SD Bentley, C Churcher, SR Klee, G Morelli, D Basham, D Brown, T Chillingworth, RM Davies, P Davis, K Devlin, T Feltwell, N Hamlin, S Holroyd, K Jagels, S Leather, S Moule, K Mungall, MA Quail, MA Rajandream, KM Rutherford, M Simmonds, J Skelton, S Whitehead, BG Spratt, BG Barrell
    posted to meningitidis sequence by tpreeprem on 2008-01-16 03:55:53 as ** along with 1 person and 1 group treangen gatech-compgenomics
  • Comparison Of 454 Sequencing Platform With Traditional Sanger Sequencing: A Case Study With De Novo Sequencing Of Prochlorococcus Marinus NATL2A Genome
    by Feng Chen, Joseph Alessi, Edward Kirton, Vasanth Singan, Paul Richardson
    posted to 454 comparasion by tpreeprem on 2008-01-16 02:56:47 as *** along with 1 group gatech-compgenomics
  • Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
    BMC Genomics, Vol. 7 (24 October 2006), 272.
    by Foo Cheung, Brian J Haas, Susanne MD Goldberg, Gregory D May, Yongli Xiao, Christopher D Town
    posted to 454 sequencing by tpreeprem on 2008-01-16 02:43:48 as ** along with 2 people and 1 group tonia_schwartz usagi-kirin gatech-compgenomics
  • Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey
    BMC Genomics, Vol. 8 (24 May 2007), 132.
    by Kankshita Swaminathan, Kranthi Varala, Matthew E Hudson
    posted to 454 assembly by tpreeprem on 2008-01-16 02:31:38 as ** along with 2 people and 2 groups ghattem GustavoLacerda BergmanLab gatech-compgenomics
  • Optical mapping as a routine tool in bacterial genome sequencing
    BMC Genomics, Vol. 8 (14 September 2007), 321.
    by Phil Latreille, Stacie Norton, Barry S Goldman, John Henkhaus, Nancy Miller, Brad Barbazuk, Helge B Bode, Creg Darby, Zijin Du, Steve Forst, Sophie Gaudriault, Brad Goodner, Heidi Goodrich-Blair, Steven Slater
    posted to assembly optical by tpreeprem on 2008-01-16 02:14:07 as ** along with 1 group gatech-compgenomics
  • High-throughput sequence alignment using Graphics Processing Units
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Michael Schatz, Cole Trapnell, Arthur Delcher, Amitabh Varshney
    posted to gpu sequencing software by tpreeprem on 2008-01-16 01:59:46 as ** along with 10 people and 1 group Yanno jyuh sephy lusk laughcry nedwards mdimon cndewey heliopais urgi gatech-compgenomics
  • 454 sequencing put to the test using the complex genome of barley
    BMC Genomics, Vol. 7 (26 October 2006), 275.
    by Thomas Wicker, Edith Schlagenhauf, Andreas Graner, Timothy J Close, Beat Keller, Nils Stein
    posted to 454 by tpreeprem on 2008-01-15 08:23:17 as *** along with 5 people and 3 groups jmeppley balicea ghattem azazello cisevol MBLAB BergmanLab gatech-compgenomics
  • ARACHNE: A Whole-Genome Shotgun Assembler
    Genome Res., Vol. 12, No. 1. (1 January 2002), pp. 177-189.
    by Serafim Batzoglou, David B Jaffe, Ken Stanley, Jonathan Butler, Sante Gnerre, Evan Mauceli, Bonnie Berger, Jill P Mesirov, Eric S Lander
    posted to arachne assembly software by tpreeprem on 2008-01-15 07:31:55 as ** along with 10 people and 3 groups pradiptaray Neeperando bpb dayjm balajis indigoviolet balicea ccr azazello wenhan EisenLab MBLAB gatech-compgenomics
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