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tuck microarray [42 articles]

Recent papers added to tuck library classified by the tag microarray. You can also see everyone's microarray.
  • Gene expression patterns for doxorubicin (Adriamycin) and cyclophosphamide (Cytoxan) (AC) response and resistance
    Breast Cancer Research and Treatment, Vol. V95, No. 3. (28 February 2006), pp. 229-233.
    by Susan Cleator, Anna Tsimelzon, Alan Ashworth, Mitch Dowsett, Timothy Dexter, Trevor Powles, Susan Hilsenbeck, Helen Wong, Kent C Osborne, Peter Oâconnell, Jenny C Chang
    posted to breast microarray by tuck on 2006-12-29 02:21:11 as **
  • A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers
    Nature Genetics, Vol. 38, No. 9. (20 August 2006), pp. 1043-1048.
    by Scott L Carter, Aron C Eklund, Isaac S Kohane, Lyndsay N Harris, Zoltan Szallasi
    posted to aneuploidy cancer chromosomal_instability microarray by tuck on 2006-09-05 19:47:12 as ** along with 3 people and 1 group jfr ealloza cpnP BioinfoCIPF
  • Dynamic model-based clustering for time-course gene expression data.
    J Bioinform Comput Biol, Vol. 3, No. 4. (August 2005), pp. 821-836.
    by FX Wu, WJ Zhang, AJ Kusalik
    posted to microarray time_series by tuck on 2006-07-21 19:21:51 as ** along with 1 person dps
  • Dissecting self-renewal in stem cells with RNA interference
    Nature, Vol. 442, No. 7102. (11 June 2006), pp. 533-538.
    by Natalia Ivanova, Radu Dobrin, Rong Lu, Iulia Kotenko, John Levorse, Christina Decoste, Xenia Schafer, Yi Lun, Ihor R Lemischka
    posted to microarray microrna mouse stemcell by tuck on 2006-06-16 18:52:48 as ** along with 1 person jsnoddy
  • Polycomb complexes repress developmental regulators in murine embryonic stem cells
    Nature (19 April 2006)
    by Laurie A Boyer, Kathrin Plath, Julia Zeitlinger, Tobias Brambrink, Lea A Medeiros, Tong I Lee, Stuart S Levine, Marius Wernig, Adriana Tajonar, Mridula K Ray, George W Bell, Arie P Otte, Miguel Vidal, David K Gifford, Richard A Young, Rudolf Jaenisch
    posted to chip-chip chromatin microarray stemcell by tuck on 2006-05-17 01:36:28 as ** along with 4 people and 1 group inesdesantiago cconboy nickluscombe eukfn EBI-regulation
  • Factorial and time course designs for cDNA microarray experiments.
    Biostatistics, Vol. 5, No. 1. (January 2004), pp. 89-111.
    by GF Glonek, PJ Solomon
    posted to anova factorial microarray statistics by tuck on 2006-05-13 20:36:19 as **
  • MicroArray Quality Control Project on the Evaluation of Analysis Protocols for Deoxyribonucleic Acid Microarray Data
    posted to microarray by tuck on 2006-05-05 11:58:55 as **
  • Genetic regulators of large-scale transcriptional signatures in cancer
    Nature Genetics, Vol. 38, No. 4. (05 March 2006), pp. 421-430.
    by Adam S Adler, Meihong Lin, Hugo Horlings, Dimitry SA Nuyten, Marc J van de Vijver, Howard Y Chang
    posted to cgh copy_number microarray transcription_factor by tuck on 2006-04-28 06:13:46 as ** along with 5 people ihpark oelemento jfr ccots Ao_Li2007
  • Identification and functional significance of genes regulated by structurally different histone deacetylase inhibitors.
    Proc Natl Acad Sci U S A, Vol. 102, No. 10. (8 March 2005), pp. 3697-3702.
    by MJ Peart, GK Smyth, RK van Laar, DD Bowtell, VM Richon, PA Marks, AJ Holloway, RW Johnstone
    posted to hdac limma microarray by tuck on 2006-04-24 12:26:25 as **
  • Differential expression of novel potential regulators in hematopoietic stem cells.
    PLoS Genet, Vol. 1, No. 3. (September 2005)
    by EC Forsberg, SS Prohaska, S Katzman, GC Heffner, JM Stuart, IL Weissman
    posted to microarray mouse stemcell by tuck on 2006-04-23 19:46:27 as **
  • Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer.
    Lancet, Vol. 365, No. 9460. (5 2005), pp. 671-679.
    by Y Wang, JG Klijn, Y Zhang, AM Sieuwerts, MP Look, F Yang, D Talantov, M Timmermans, ME Meijer-van Gelder, J Yu, T Jatkoe, EM Berns, D Atkins, JA Foekens
    posted to affymetrix breast cancer microarray by tuck on 2006-04-18 21:45:40 as ** along with 6 people and 2 groups winterschlaefer giovenko jfr giovanni frohike cberry Bioinformatics GeschwindLab
  • A gene-expression signature as a predictor of survival in breast cancer.
    N Engl J Med, Vol. 347, No. 25. (19 December 2002), pp. 1999-2009.
    by MJ van de Vijver, YD He, LJ van't Veer, H Dai, AA Hart, DW Voskuil, GJ Schreiber, JL Peterse, C Roberts, MJ Marton, M Parrish, D Atsma, A Witteveen, A Glas, L Delahaye, T van der Velde, H Bartelink, S Rodenhuis, ET Rutgers, SH Friend, R Bernards
    posted to breast cancer microarray survival by tuck on 2006-04-18 21:40:59 as ** along with 7 people and 1 group jfr adelgiglio giovanni frohike Ao_Li2007 lyndon macavity1g GeschwindLab
  • Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival.
    Proc Natl Acad Sci U S A, Vol. 102, No. 10. (8 March 2005), pp. 3738-3743.
    by HY Chang, DS Nuyten, JB Sneddon, T Hastie, R Tibshirani, T Sørlie, H Dai, YD He, LJ van't Veer, H Bartelink, M van de Rijn, PO Brown, MJ van de Vijver
    posted to breast cancer microarray by tuck on 2006-04-18 21:38:46 as ** along with 2 people ggrot jfr
  • Gene expression profiling predicts clinical outcome of breast cancer.
    Nature, Vol. 415, No. 6871. (31 January 2002), pp. 530-536.
    by LJ van 't Veer, H Dai, MJ van de Vijver, YD He, AA Hart, M Mao, HL Peterse, K van der Kooy, MJ Marton, AT Witteveen, GJ Schreiber, RM Kerkhoven, C Roberts, PS Linsley, R Bernards, SH Friend
    posted to breast cancer microarray survival by tuck on 2006-04-18 21:35:04 as ** along with 12 people and 1 group jo_davies nedwards jfr bedo giovanni frohike Ao_Li2007 lyndon macavity1g winterschlaefer Lara waghsk GeschwindLab
  • Microarray-based DNA methylation profiling: technology and applications.
    Nucleic Acids Res, Vol. 34, No. 2. (2006), pp. 528-542.
    by A Schumacher, P Kapranov, Z Kaminsky, J Flanagan, A Assadzadeh, P Yau, C Virtanen, N Winegarden, J Cheng, T Gingeras, A Petronis
    posted to methylome microarray by tuck on 2006-04-12 21:58:16 as ** along with 1 person tvdbulck
  • Acute myeloid leukemia with a complex aberrant karyotype is a distinct biological entity characterized by genomic imbalances and a specific gene expression profile.
    Genes Chromosomes Cancer, Vol. 43, No. 3. (July 2005), pp. 227-238.
    by C Schoch, W Kern, A Kohlmann, W Hiddemann, S Schnittger, T Haferlach
    posted to human leukemia microarray by tuck on 2006-04-05 04:38:22 as **
  • Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data.
    Nat Genet, Vol. 34, No. 2. (June 2003), pp. 166-176.
    by E Segal, M Shapira, A Regev, D Pe'er, D Botstein, D Koller, N Friedman
    posted to biclustering microarray module network by tuck on 2006-04-02 03:35:56 as ** along with 13 people chrisamiller pkm tvdbulck dragonrez bayesian wnpx tabu koller olympos fishtank dimatura karfunkel roys
  • TileMap: create chromosomal map of tiling array hybridizations
    Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3629-3636.
    by Hongkai Ji, Wing H Wong
    posted to genome microarray by tuck on 2006-03-30 12:37:46 as ** along with 3 people dquest caseybrown inesdesantiago
  • Differential coexpression analysis using microarray data and its application to human cancer.
    Bioinformatics, Vol. 21, No. 24. (15 December 2005), pp. 4348-4355.
    by JK Choi, U Yu, OJ Yoo, S Kim
    posted to microarray transcription by tuck on 2006-02-28 18:15:43 as **
  • Prognostically useful gene-expression profiles in acute myeloid leukemia.
    N Engl J Med, Vol. 350, No. 16. (15 April 2004), pp. 1617-1628.
    by PJ Valk, RG Verhaak, MA Beijen, CA Erpelinck, S Barjesteh van Waalwijk van Doorn-Khosrovani, JM Boer, HB Beverloo, MJ Moorhouse, PJ van der Spek, B Löwenberg, R Delwel
    posted to leukemia microarray myeloid by tuck on 2006-02-28 09:19:47 as **
  • Spectral biclustering of microarray data: coclustering genes and conditions.
    Genome Res, Vol. 13, No. 4. (April 2003), pp. 703-716.
    by Y Kluger, R Basri, JT Chang, M Gerstein
    posted to biclustering microarray by tuck on 2006-02-28 08:29:24 as ** along with 6 people tvdbulck rmj001 yuval filippone shigepong dps
  • Distinctions in the specificity of E2F function revealed by gene expression signatures
    PNAS, Vol. 102, No. 44. (1 November 2005), pp. 15948-15953.
    by Esther P Black, Timothy Hallstrom, Holly K Dressman, Mike West, Joseph R Nevins
    posted to cancer microarray pathway by tuck on 2006-02-24 07:56:35 as **
  • Hierarchical and ontogenic positions serve to define the molecular basis of human hematopoietic stem cell behavior.
    Dev Cell, Vol. 8, No. 5. (May 2005), pp. 651-663.
    by F Shojaei, J Trowbridge, L Gallacher, L Yuefei, D Goodale, F Karanu, K Levac, M Bhatia
    posted to microarray stemcell transcription by tuck on 2006-02-14 04:20:53 as **
  • The transcriptome of the leukemogenic homeoprotein HOXA9 in human hematopoietic cells
    Blood, Vol. 103, No. 5. (1 March 2004), pp. 1676-1684.
    by Sheri T Dorsam, Christina M Ferrell, Glenn P Dorsam, Mika K Derynck, Ulka Vijapurkar, Daniel Khodabakhsh, Bonnie Pau, Hillary Bernstein, Christopher M Haqq, Corey Largman, Jeffrey H Lawrence
    posted to hox leukemia microarray by tuck on 2006-02-10 19:23:50 as ** along with 1 person hplatero
  • Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data.
    BMC Bioinformatics, Vol. 5 (18 March 2004)
    by F Gao, BC Foat, HJ Bussemaker
    posted to chip-chip microarray model transcription by tuck on 2006-01-27 18:08:13 as ** along with 7 people and 1 group tvdbulck mariakmejia tmmurali gpalidwor nickluscombe koller Ao_Li2007 EBI-regulation
  • notes Global approach to the diagnosis of leukemia using gene expression profiling
    Blood, Vol. 106, No. 4. (15 August 2005), pp. 1189-1198.
    by Torsten Haferlach, Alexander Kohlmann, Susanne Schnittger, Martin Dugas, Wolfgang Hiddemann, Wolfgang Kern, Claudia Schoch
    posted to human leukemia microarray by tuck on 2006-01-10 10:42:05 as ** along with 2 people kentsis tabu
  • Characterization of gene expression of CD34+ cells from normal and myelodysplastic bone marrow
    Blood, Vol. 100, No. 10. (15 November 2002), pp. 3553-3560.
    by Wolf-K Hofmann, Sven de Vos, Martina Komor, Dieter Hoelzer, William Wachsman, Phillip H Koeffler
    posted to cd34 human microarray myelodysplasia by tuck on 2006-01-10 10:36:38 as **
  • "Stemness": transcriptional profiling of embryonic and adult stem cells.
    Science, Vol. 298, No. 5593. (18 October 2002), pp. 597-600.
    by M Ramalho-Santos, S Yoon, Y Matsuzaki, RC Mulligan, DA Melton
    posted to microarray stemcell by tuck on 2006-01-09 15:05:22 as ** along with 2 people miguel hplatero
  • MicroRNA profiling of the murine hematopoietic system.
    Genome Biol, Vol. 6, No. 8. (2005)
    by S Monticelli, KM Ansel, C Xiao, ND Socci, AM Krichevsky, TH Thai, N Rajewsky, DS Marks, C Sander, K Rajewsky, A Rao, KS Kosik
    posted to hematopoiesis microarray microrna mouse by tuck on 2006-01-06 18:21:11 as ** along with 2 people and 1 group tardigrade heliopais microRNA
  • Gene expression profiling during all-trans retinoic acid-induced cell differentiation of acute promyelocytic leukemia cells.
    J Mol Diagn, Vol. 5, No. 4. (November 2003), pp. 212-221.
    by L Yang, H Zhao, SW Li, K Ahrens, C Collins, S Eckenrode, QG Ruan, RA McIndoe, JX She
    posted to microarray myelopoiesis nb4 transcription by tuck on 2006-01-05 11:36:22 as **
  • Dissection of a DNA-damage-induced transcriptional network using a combination of microarrays, RNA interference and computational promoter analysis.
    Genome Biol, Vol. 6, No. 5. (2005)
    by R Elkon, S Rashi-Elkeles, Y Lerenthal, C Linhart, T Tenne, N Amariglio, G Rechavi, R Shamir, Y Shiloh
    posted to dna_damage microarray transcription by tuck on 2006-01-03 20:38:40 as **
  • Sox4 cooperates with Evi1 in AKXD-23 myeloid tumors via transactivation of proviral LTR.
    Blood (4 October 2005)
    by Kathryn E E Boyd, Ying-Yi Y Xiao, Kai Fan, Amanda Poholek, Neal G G Copeland, Nancy A A Jenkins, Archibald S S Perkins
    posted to aper microarray myelopoiesis by tuck on 2006-01-02 10:07:22 as **
  • Gene expression profile reveals deregulation of genes with relevant functions in the different subclasses of acute myeloid leukemia
    Leukemia, Vol. aop, No. current. (20 January 2005)
    by NC Gutierrez, R Lopez-Perez, JM Hernandez, I Isidro, B Gonzalez, M Delgado, E Ferminan, JL Garcia, L Vazquez, M Gonzalez, JFS San Miguel
    posted to leukemia microarray transcription by tuck on 2006-01-02 09:39:44 as **
  • An integrative genomics approach to infer causal associations between gene expression and disease
    Nature Genetics, Vol. 37, No. 7. (19 June 2005), pp. 710-717.
    by Eric E Schadt, John Lamb, Xia Yang, Jun Zhu, Steve Edwards, Debraj Guhathakurta, Solveig K Sieberts, Stephanie Monks, Marc Reitman, Chunsheng Zhang, Pek Y Lum, Amy Leonardson, Rolf Thieringer, Joseph M Metzger, Liming Yang, John Castle, Haoyuan Zhu, Shera F Kash, Thomas A Drake, Alan Sachs, Aldons J Lusis
    posted to microarray qtl by tuck on 2005-12-30 06:03:19 as ** along with 11 people and 1 group chrisamiller pcahan1 brant ckehl koller giovanni lp2 dejori natstreet jo_davies caseybrown GeschwindLab
  • Two types of precursor cells in a multipotential hematopoietic cell line
    PNAS, Vol. 102, No. 51. (20 December 2005), pp. 18461-18466.
    by Zhi-Jia Ye, Yuval Kluger, Zheng Lian, Sherman M Weissman
    posted to cd34 differentiation hematopoiesis microarray by tuck on 2005-12-30 01:39:26 as **
  • Human cancers overexpress genes that are specific to a variety of normal human tissues
    PNAS, Vol. 102, No. 51. (20 December 2005), pp. 18556-18561.
    by Joseph Lotem, Dvir Netanely, Eytan Domany, Leo Sachs
    posted to cancer microarray by tuck on 2005-12-24 04:09:30 as **
  • Global regulation of erythroid gene expression by transcription factor GATA-1
    Blood, Vol. 104, No. 10. (15 November 2004), pp. 3136-3147.
    by John J Welch, Jason A Watts, Christopher R Vakoc, Yu Yao, Hao Wang, Ross C Hardison, Gerd A Blobel, Lewis A Chodosh, Mitchell J Weiss
    posted to erythropoiesis microarray transcription by tuck on 2005-12-24 03:57:57 as **
  • The transcriptional program of terminal granulocytic differentiation
    Blood, Vol. 105, No. 4. (15 February 2005), pp. 1785-1796.
    by Kim Theilgaard-Monch, Lars C Jacobsen, Rehannah Borup, Thomas Rasmussen, Malene D Bjerregaard, Finn C Nielsen, Jack B Cowland, Niels Borregaard
    posted to hematopoiesis microarray myelopoiesis transcription by tuck on 2005-12-24 03:42:51 as **
  • Molecular Signatures of Self-Renewal, Differentiation, and Lineage Choice in Multipotential Hemopoietic Progenitor Cells In Vitro
    Mol. Cell. Biol., Vol. 24, No. 2. (15 January 2004), pp. 741-756.
    by Ludovica Bruno, Reinhard Hoffmann, Fraser Mcblane, John Brown, Rajeev Gupta, Chirag Joshi, Stella Pearson, Thomas Seidl, Clare Heyworth, Tariq Enver
    posted to hematopoiesis microarray transcription by tuck on 2005-12-17 04:01:45 as **
  • Gene expression signatures define novel oncogenic pathways in T cell acute lymphoblastic leukemia
    Cancer Cell, Vol. 1, No. 1. (February 2002), pp. 75-87.
    by Adolfo A Ferrando, Donna S Neuberg, Jane Staunton, Mignon L Loh, Christine Huard, Susana C Raimondi, Fred G Behm, Ching-Hon Pui, James R Downing, Gary D Gilliland
    posted to leukemia microarray t-cell transcription by tuck on 2005-12-17 03:34:57 as **
  • Transcriptional Profiling of Human Hematopoiesis During In Vitro Lineage-Specific Differentiation
    Stem Cells, Vol. 23, No. 8. (1 September 2005), pp. 1154-1169.
    by Martina Komor, Saskia Guller, Claudia D Baldus, Sven de Vos, Dieter Hoelzer, Oliver G Ottmann, Wolf-K Hofmann
    posted to microarray stemcell transcription by tuck on 2005-12-16 03:26:00 as **
  • Oncogenic pathway signatures in human cancers as a guide to targeted therapies
    Nature (06 November 2005)
    by Andrea H Bild, Guang Yao, Jeffrey T Chang, Quanli Wang, Anil Potti, Dawn Chasse, Mary-Beth Joshi, David Harpole, Johnathan M Lancaster, Andrew Berchuck, John A Olson, Jeffrey R Marks, Holly K Dressman, Mike West, Joseph R Nevins
    posted to cancer microarray pathway by tuck on 2005-11-30 02:38:06 as *** along with 11 people srp33 Yanno jyuh kentsis mfenner ajeffs maryee eckart_bindewald frohike Ao_Li2007 waghsk
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